Pleuronectes platessa (European plaice): 128425801
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Entry
128425801 CDS
T09923
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128425801 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128425801 (sox17)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128425801 (sox17)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
128425801
NCBI-ProteinID:
XP_053268602
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All DBs
Position
20:16320721..16322834
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AA seq
395 aa
AA seq
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MSSPDAGYASDDQTQARCAMSVMMPGMGHCQWADPLSPLGDAKVKSEPCASGSGSQNRGK
TEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPVTEKQPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRIKRLDPGFLVHGVVDHQAGGMPGDGRVCVDSLGLGY
HEHGFQLPPQQLSHYREALGGPSYDNYSLPTPDTSPLDAVESDSMFFPQHSQEDCHMIPA
YAYHSQAAEYQHQEAHSNHHGNSVLHRHSASAPEQPASLPPSYMGCPNPLAMYYTQHCSP
SHAKRHPGGAGQLSPPPDSHPHSADSVEQMHHSELLAEVDRSEFEQYLSSSSARADMTGL
AYVPHEAGMQGPESLISSVLSDASTAVYYCSYNNS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggttacgccagcgacgatcagacccaggcaaggtgtgcgatg
tcagtcatgatgccgggaatgggacactgtcagtgggccgaccccctcagtcctctcggg
gacgccaaggtgaagagcgagccgtgcgcgtccggctccggcagccagaaccgcggcaag
accgagccgcggatccgacggcccatgaacgcgttcatggtctgggcgaaggatgagcgc
aagaggctggcgcagcagaacccggacctgcacaacgcggagctgagcaaaatgttgggg
aaatcatggaaagcccttcctgtcacagaaaagcagccctttgtggaggaggccgagcgg
ctgcgggttcagcacatgcaggatcaccccaactacaagtacaggccccggcggcggaag
caggtgaagaggattaagaggctggaccccggctttctggtccatggcgtggtcgaccac
caggccggggggatgcccggcgacggcagggtgtgtgtggacagcctgggcctgggctac
cacgagcacggcttccagcttcctccacagcagctcagtcactaccgggaggccctcggg
ggcccctcttatgacaactacagcctccccacacctgacacctctcctctggacgccgtg
gagtcagactccatgttcttccctcaacactcacaagaggactgccacatgatacctgcc
tacgcttaccactcccaggcggcagagtaccagcaccaggaggcccactccaaccaccac
ggcaactccgtcctgcaccgacactctgcctcggctccagagcagccggcctctctcccc
ccttcctacatgggatgccccaaccctctggccatgtattacacccagcactgcagtccc
agccacgcgaaacggcatcctgggggggcaggacagctctcccctcctcctgactctcac
ccccactcggcagacagcgtggagcagatgcaccactcggagctgctggctgaggtggac
cgcagcgagttcgagcagtatttgagttcctcctcagcgcgtgcggacatgacaggcctg
gcctatgtgccgcacgaggctggcatgcaggggcctgagagcctcatatcatcggtgctg
tcagacgccagcacagctgtgtattactgtagctacaacaactcctaa
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