Pleuronectes platessa (European plaice): 128425848
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Entry
128425848 CDS
T09923
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pplt04040
]
128425848 (trpc1)
Ion channels [BR:
pplt04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128425848 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Topo_VI_alpha
TALPID3
Motif
Other DBs
NCBI-GeneID:
128425848
NCBI-ProteinID:
XP_053268655
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Position
20:14932918..14946222
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AA seq
796 aa
AA seq
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MHISVGPYSLSVVMSALYQGTDVSSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRRGELNINCVDVLGRDAVTITIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLRELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDQVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSICYLLVPRSRVGHIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDCLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLSTFALKIVAHSKFKN
VADTERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKTPAKDCEGIFCQQQSNDAFHTFMGTCYALFWY
IFSLAHVALFVTRITYTEELRSFVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTMPPPFNILPSPKTVVYIVTSMSKWICSHTSKGKVKRQNSL
KEWRNLKQKRDQNYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtcgggccgtactcgctctccgtcgtaatgtcagccttgtaccagggc
acggacgtgtcctctccggataaatttctggccctgaaagacgtgagggaggtgaaggag
gagacgacgctggacgagaagctgttcctgctggcctgcgagaaaggtgactactacatg
gtgaagaagctcctggaggagaaccgacgcggcgagctcaacatcaactgcgtggacgtg
ctgggccgggacgccgtgaccatcaccatcgagaacgagaacctggacatcctgcagctg
ctgctggagcatggctgccaggcgacagatgccttgttggtggccatagactcagaggtg
gtgggagctgtggacatcctcctcaaccacaggcccaggcgatcgtccaagccctccatc
gccaaactgatgcagcggatccagaacccggagtattccaccaccatggacgtggctccg
gtcatcctggcagcgcacaggaacaactacgagatcctcaccatgctgctgaagcaggac
atctcgctcccccggccgcacgccgtcggctgcgagtgcacgctctgcaacgccaagaac
aagaaggacagcttacgacactccaggttccggctggacatctaccgctgcctggccagt
ccctctctgatcatgttgaccgaggaggaccccatcctcagggcctttgagctgagcaca
gacctccgggagctcagtctggttgaggtggagttcaggaatgattacgaggagctggcg
aagcagtgcaagatgttcgccaaggacctgctggcccaggctcggaactctcgagagctg
gaagttattcttaatcacacgtccaacgaggatcaggtcgacaagagaggcttgttggag
gagcgcatgaacctcagccgcctcaagctcgccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgccagcagttcctcaacaccgtgtggttcggagagacggcgagctac
cggcgcaagcacacctgtctgaagatggccacggtgctgagcgtggccatgctctggccg
ctgctctccatctgctacctgctggtgccgcggtcgcgcgtgggccacatcatccacacg
cccttcgtcaagttcatcatccacagcgcctcctacttcaccttcctgctgctgctcaac
ctctactctctggtctacaacgagggcaagaagaacaccatgggccccgcgctggagatg
atcgactgcctgctcatcctgtggatcatagggatggtgtggtcggatgtgaagcggctg
tggtacgaggggctggaagacttcctggaagagtcgaggaaccagctgagcttcgtgatg
aattccctttatctctccacctttgccctgaagattgttgctcatagcaagttcaagaac
gtggcggacaccgagaggaagaactgggacgcgttccatcccatcctggtggccgagggc
ctgttcgccttcgctaacgttctcagctacctgcgcctcttcttcatgtacaccaccagc
tccatactggggccgctgcagatctccatgggtcagatgctgcaggagtttggaaagttc
ctgggcctcttcctgctggtgctgttctccttcaccatcggactcactcagctctatgga
aaagaccagaaggacccggacaagactccagccaaggactgtgagggcatcttctgccag
caacagagcaatgatgcattccacacgttcatggggacctgctacgccctcttctggtac
atcttctccctggcgcacgtggcgctcttcgtcacccgcatcacctacaccgaggagctg
cgctccttcgtgggcgccatgatcatcggcacctacaacatcgtggttgttattgtcctg
accaagctgctggtggccatgctccataaaagcttcagacaaattgctaatcacgaagac
aaggagtggaagttcgcccgggccaagctgtggctgagctacttcgatgacaagtgcacg
atgccgccgccgttcaatatcctcccgtcgccaaagaccgtggtttacatcgtgaccagc
atgagcaagtggatctgttcacacacctcgaaggggaaggtgaagagacagaacagcctg
aaggagtggaggaacctgaagcagaagcgcgatcagaactaccagaagatcatgtgttgc
ctggttcaccgctacctgacctccacgcggcaaaaaatgcaaagcacagaccaggccacg
gtggagaacctgaacgacttgcgccaggacctctccaagttccgcaacgagatgagggac
ctgctgggtttccggacgtccaaatacgccatgttctacccgaggagctaa
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