Pleuronectes platessa (European plaice): 128425925
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Entry
128425925 CDS
T09923
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04140
Autophagy - animal
pplt04148
Efferocytosis
pplt05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128425925 (vps41)
04148 Efferocytosis
128425925 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128425925 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128425925 (vps41)
Membrane trafficking [BR:
pplt04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
128425925 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_RIG_2nd
zf_RING_Vps8_fungal
WD40_Prp19
Vps39_1
TPR_7
Beta-prop_HPS5
Beta-prop_EML_2
WD40_WDHD1_1st
TPR_19
zf_RING_Vps8
TPR_GEMI5
TPR_17
TPR_PEP5_VPS11
zf-Vps39_C
Frtz
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
128425925
NCBI-ProteinID:
XP_053268738
LinkDB
All DBs
Position
20:complement(16359402..16374173)
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AA seq
853 aa
AA seq
DB search
MAEVEEGRKQSEEFTDESEEEDSEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLALG
THFGKVFLLDIQGNVTQKFEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTREGFHE
NFDCPIKVVAVHPQFTRSNYKQFVTGGNKLLLYERNWLNRWKTSLLHEGEGPITNIQWRA
NLIAWANNVGVKIYDIGTKQRITNVLRDNVSLRPDMYPCSLCWKDNATLIVGWGTSIKIC
VVKERNPTEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLFFVKENSDQMDEEFRAR
PRLDIIQPLPENCEEISSDALTVRNFQDNECRDYRLEHSEGESLFYIISPKDIVVAKERD
QDDHIDWLLEKKKYEEALMAAEISFKNIKRHDVQKIGMSYINHLVEKGDYDTAARKCQKV
LGKNMELWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLRTDYEGFATLIR
EWPGELYNNMAVVQAVTDHLKRDPTNSTLLTTLAELYTYDQRYDRALEIYLRLRHKDVYQ
LIHKHNLFSSIEDKIVLLMDFDKEKAVDMLLDNEDKISTDRVVEELADRPELLHVYLHKS
FKRDHHKGQRYHERQIGLYAEYDRPNLLPFLRDSTHCPLEKALEICQERNFVEETVFLLS
RMGNCRRALQMIMEELEDVDKAIDFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTHV
DPILLIHRIKEGMEIPNLRDSLVKILQDYNLQIMLREGCKKILVADSLSLLQKMHRTQMR
GVRVDEENICESCHATILPSDMAKPFNVVVFHCRHMFHKECLPTPGTIHGVQFCNICSAK
KRGPGSGILEMKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtggaggagggcagaaaacaaagtgaggagttcacagatgagtctgaggag
gaggacagtgaggaggagcccaagctgaagtatgagaggctctccaatggggtgaccgaa
atcctccaaaaggatgcagccagctgtatgaccgtccacgacaagtttcttgccctcggt
acacattttggaaaagtcttcctgctggacatccaaggaaatgtcactcagaagtttgaa
attagttcagtgaagatcaaccagatcagtctggatgaaagtggagagcatgtgggcatc
tgctccgaggacgggaaggttcaagtgttcggcctctatacaagagagggcttccacgag
aacttcgactgtcccatcaaagtggtagctgtacaccctcagttcaccagatcgaactat
aaacagtttgtcactgggggcaacaagcttcttctctatgaaagaaactggttgaatcgc
tggaagacgtcgctgctgcatgaaggcgaaggccccatcactaacatccagtggagagcc
aacctcattgcctgggcaaacaacgtgggagttaaaatctatgacatcggcacgaaacag
cgcatcaccaacgtgctgcgggataacgtgagtctgaggcctgacatgtacccatgcagc
ctgtgttggaaggacaacgccactcttattgttggctgggggacatccatcaagatttgt
gtcgtgaaagagcgaaatcccactgagatgagagatctgcccagccgctatgtggaaata
gtgtctgcattcgagacagagtttttcatcagtggcctggcacctctggcagatcagctg
gtcaccctgttctttgtgaaggagaactcggatcagatggatgaggagttccgtgcccgg
cctcgtctcgacatcatccagcctctccctgagaactgtgaggagatctcctcagacgcg
ctgacagtgcgcaacttccaagacaacgagtgcagagactatcgcctcgagcattcagag
ggagagtcgctcttctacatcattagtcccaaagatatcgttgtggccaaagagcgagac
caggacgaccatatcgattggctgcttgaaaagaagaaatatgaggaggcactgatggct
gcagagatcagcttcaagaacattaagagacacgacgttcagaaaatcgggatgtcttac
ataaaccatttagtggagaaaggagactacgacactgctgcgaggaagtgtcaaaaggtt
ctcgggaaaaacatggaattgtgggaaaatgaagtttataggttcaaaaccatcggtcaa
ctgaaggccatcagccagtatctacccagaggagatctgcgtctcagaccagccatctat
gagatgatcctgcacgaattcctccgaactgattatgagggttttgcgacactgatccgg
gaatggcccggagagctttacaacaacatggccgtcgttcaggccgtcacagatcacctg
aagagggatcccaccaacagcaccttgctcaccacactggctgaactgtacacgtatgac
cagcggtacgacagagccttagaaatctacctgagactgaggcacaaagacgtttaccag
ctgatccacaaacacaacctgttctcatccatagaagacaagatcgttcttctcatggac
tttgacaaagagaaagccgttgacatgctcctagacaatgaagacaagatatcaacggac
agggtggtcgaagaacttgcagacaggcccgagcttctgcatgtgtatctccataaatca
ttcaagcgcgaccaccacaaaggccaaaggtaccacgagaggcagattggcctgtacgca
gagtacgaccgaccaaatctcttacccttcctgagagacagcacccactgcccacttgaa
aaggctcttgagatttgtcaggagagaaactttgtagaagagaccgtcttcctgctcagc
aggatggggaactgcagacgcgctctgcagatgatcatggaggagctggaggacgtggac
aaagccatcgatttcgctaaagagcaggacgatgccgagctgtgggaggatctcatctct
tactctattgacaaaccacctttcatcactggcctccttaataacatcggtactcatgtg
gatcccatcctactcatccaccgcataaaggagggcatggagatcccgaacctcagagat
tcactagtgaaaatccttcaggactacaatctacagattatgctgagagaaggatgtaag
aagatccttgtggccgactcgctctcgctgctgcagaagatgcacagaacgcagatgaga
ggagtcagggtcgatgaggagaacatttgtgaatcgtgtcacgctactatattaccatcc
gacatggccaaacccttcaacgtggtggtgtttcactgcagacacatgtttcacaaagaa
tgtttaccaacaccaggaacaatccatggcgtccagttttgtaacatctgcagtgcgaag
aagcgggggccaggaagtggcatacttgagatgaaaaagtaa
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