Pleuronectes platessa (European plaice): 128425980
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Entry
128425980 CDS
T09923
Symbol
si:dkey-225n22.4
Name
(RefSeq) collagen alpha-1(XXI) chain
KO
K16629
collagen type XXI alpha
Organism
pplt
Pleuronectes platessa (European plaice)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
CMV_1a
Copine
Motif
Other DBs
NCBI-GeneID:
128425980
NCBI-ProteinID:
XP_053268803
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Position
20:complement(4182026..4252794)
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AA seq
944 aa
AA seq
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MRQLSYRDMLLWSVWSAILLLTPLEAAEEEDVRAGCSTAVNDLVYIVDGSWSVGVSDFDR
AKQWLINITSQFDISSHYTQLAVIQYSDTPRLEISLGTHQGEAELIEAIESITYLGGNTQ
TGRAIKFAVDHVFAASQRASQVKNRIAVVVTDGKSQDDVVDASMEARAQGITVFAVGVGS
EITTSELVSIANKPSSTYVLYAEDYTNIDRIRDSMKQKLCEESVCPTRIPVASRDEKGFE
LLLGLNIQMKAKKIPGSLVSEIAYALTSTTDITENTREIFPEGLPPSYVFVATLRLQGSA
SKLTFDLWRVLSKDKEMQAAVTLSGKDKTVTFTATRLNEEEQSVIFKNGFQNLYDGKWHQ
LKLLVRPSQVTGFLDDELIQEVKLEPMEPIYINGETQVAKRRGTDLTVPVEIQKLRLYCD
PHQSERETACEIYSVDDERCPLNRTASEDEDDCSNCAVGPPGQRGPPGRMGFRGQKGREG
PPGPDGKPGKDGNPGAHGPPGLTGLKGEGGPVGLRGELGLKGDKGDRGQPGLLGEPGLPG
PKGLPGETGEAGPPGEAGSMGEPGLPGTGGLVGPPGKKGQKGVPGLAGAAGAQGAPGVPG
ASGEVGPAGAPGETGLPGQQGLAGMKGIQGPPGPPGLIGQDGPKGECGDPGVAGSFGPAG
EKGSTGEAGFPGLPGGMGLPGFKGHKGERGEAGSKGNQGERSRDGEPGTPGVPGEVGPRG
WKGEKGVTGDTGPRGPEAKKGDMGHMGTVGPRGFQGQDGLPGQPGQPGYPGKPGKPPSDE
YLLKLLTDVLRNQLPALLQTLAPQARCEPCQNIKGPPGEPGAPGTKGSMGTPGYPGSSGS
PGYPGPTGLQGPAGIKGDMGSRGLKGSKGEGYRGPPGPPGYPGIQGPRGFDGIGHPGNQG
IPGKQGPQGDPGKRGSSGPPGVCDISMCYQSYNLREHYSKGPNV
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctctcctacagagacatgttgctttggtcggtgtggagtgcgatattacta
ctgaccccactggaggctgcagaggaggaggatgtgcgagcaggctgcagcacagctgtg
aatgacctggtgtatattgttgatggctcatggagtgtcggagtctctgactttgacagg
gccaagcagtggcttatcaacatcaccagccagtttgacatcagttcacactacacacag
ctggctgtgatccagtacagtgacacacctcgattggagatctccctggggacacaccag
ggcgaagcagagctcatcgaggccatagagagcatcacctacctgggaggaaacacacag
actggaagggccattaagtttgctgtggaccacgtcttcgccgcatctcagcgagccagc
caagtgaagaaccgcattgccgtggttgtcactgatggaaaatctcaggatgatgtggta
gatgccagtatggaggcacgagctcagggcattacagtatttgcagtcggggtcggcagt
gagatcaccacctcagagctggtgtccatcgccaataaaccgtcatccacctacgtcctg
tatgcagaggattacaccaacattgaccgtatccgagactccatgaagcagaagctatgt
gaagagtctgtttgtcccacaagaatcccagtggcctctcgtgatgagaaaggctttgag
ctgctgttgggcctgaacattcagatgaaggccaagaagatccctggctctctggtttct
gagatagcatatgccctgacttcaaccacagacattactgagaataccagagagattttc
ccagaaggcctccctccatcctatgtgtttgtagccaccctgcgcctacaggggtccgct
tcaaaactgacctttgacctttggagggtgctgtcaaaggataaggagatgcaagcggca
gtgacacttagtggaaaggacaaaactgtcaccttcaccgccacgaggctaaacgaagag
gagcaaagtgtcatctttaaaaatggatttcagaatctgtatgatggaaaatggcaccag
ctcaaacttcttgtgaggccaagccaggtcaccggtttccttgacgatgagctgatccag
gaagtcaagttggaaccgatggagcccatttacatcaatggggagacgcaggtggctaag
aggagaggaacagacctcactgtgccggtggagattcagaagctgcgtctgtactgtgat
cctcaccagagtgagagagaaactgcttgtgagatctactctgtggatgatgaaaggtgt
cctctgaaccgcactgcctcagaggacgaggacgactgcagtaactgtgcagtcggaccc
ccagggcagcgcggcccaccaggccgcatgggtttcagaggacagaaaggaagggaagga
ccaccgggacctgatggtaagcctggtaaggacgggaatcctggggctcatggccctcct
ggattaacagggttgaagggtgaagggggcccagttggactgagaggggaacttggtcta
aaaggggacaagggagacagagggcagccaggcttactcggtgaaccaggactccctgga
cccaagggtcttcctggagagacgggtgaggcaggacctccgggagaggctggatcaatg
ggggagccaggactaccaggcaccggtggactggtcgggccaccaggaaaaaagggacag
aagggggttcccggattggctggtgctgctggagctcaaggtgccccgggtgttccggga
gcttccggtgaagtcggcccagctggagctccgggagagaccgggttgcctgggcagcag
ggactcgcaggaatgaagggaatccaggggcccccggggccgcccggactgatcggccaa
gatggtcccaagggagagtgtggagatccaggagtcgctggttctttcggtcctgcaggc
gagaagggctcgacgggcgaggctggttttccagggctgccaggtggcatgggcctgccg
gggttcaaaggtcacaagggagagagaggagaggctggctctaaaggaaaccagggggag
agaagcagagatggagaacctgggactcctggtgtgcctggcgaagtgggacccagggga
tggaaaggagagaaaggtgtgacaggtgacacaggcccgaggggtcctgaagcaaagaaa
ggtgacatgggacacatgggtactgttggtcccaggggatttcagggccaggatgggttg
ccaggccaaccgggccagccaggatatccagggaaacctggcaaacctccctcagatgaa
tatcttctaaagctcctcactgatgttctgcgaaatcaactcccagcactgctccagacc
ttggccccccaagcaaggtgtgaaccctgccagaacatcaagggacccccgggcgagcca
ggagcaccaggtaccaaaggctccatgggaactccaggctaccctggcagcagcggctct
ccaggctacccagggccaactggacttcagggtcctgcaggcatcaaaggtgacatggga
tccagaggtctcaagggcagcaaaggagaaggttaccgtggacctccaggaccacctgga
tatccaggaattcagggtccccggggatttgatggaattggccatccaggcaatcaggga
attcctggaaaacaaggacctcagggagaccctggtaaacggggaagctcagggccccca
ggggtgtgtgatatctccatgtgttatcagagctacaacctcagggaacattacagcaaa
ggacccaacgtctga
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