Pleuronectes platessa (European plaice): 128426305
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Entry
128426305 CDS
T09923
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128426305 (jmjd1cb)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
128426305 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
DUF7030
PWWP_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
128426305
NCBI-ProteinID:
XP_053269097
LinkDB
All DBs
Position
21:18557797..18667115
Genome browser
AA seq
2945 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDDPPEIGDIGRWPWRSGVIRAVNNRDNDHPDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWAKRKEGAGGVGAGGGAGGLLQATKAKHIQWPALAF
KPVVGKSLLSSVTAVEFLLDQQLDFLSDHSTYQPYQSPLASGTWSKQRQPALKTSWDEVD
SQNPVLRDNHQLHEEVKGWLKDQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHH
DLFSRNMVVMNDQVLEPQNVDPSMIQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNSA
HMTGGRPGGTTGNNQSHYTRAQANSPRPVMNSSGPNPKVSQGTLASQQNSQSQQMQQPTS
QSNLSPGGSGREQREQRNSRSSRRKGSDSSVPEEDKDRREETTVKDSKSKVKQAVSKRRK
GEEDEKKAGLKRLKTDMTSDLSESSDSENPHNKRIAHSSCSSSSSSSSSSSSSSSSSSSE
PNSENELKTRSSDVKPSAVSKMEEDEKPLIQGAKINNSSSLIGRLSPWVELQAPDESKKG
VLKETGKIVMKEVEELVALTQIAQSPRQQCLMPDTIQVGIVESSKNTVKASPRSQSLSSS
NPQSSNVIDITDDAQATVHRESSEAVSALLASQNAESTALSPYPALNPSPVSSPPIPPSL
SPSEGGRRTDVEPTMQQQQGIMGNSLTAARTLGNKIEFATSEVIRPVTSMAESLVLVEKE
KTVLPHHHLHPHQQQQHHQQNTQQHYSSIHPGIKSPSSEETRKHPQQQPNPHKMNTVPPS
EVAKPKMSPSPKPSTPQLDSLKQKPQHPNNSQSHSYPNTNPTEHLKTRSHPGLLEISRPK
PNTSPEVFKHKIPRFPDTSPPPTGRLSAKLETAEPLRSCFKPVPARPQSVGVCMSSSSSK
SPLIIDKNETFTVYRDPALVRSDAENSVAASVSSNHVAAYLHPHLHTLHSPSPHPPCLTP
ASHPHATSHLLSASHTSALPHPHLLLPGVLSAMPPPTASLLGGHPRLDSPGGLGHRRLPH
LAAAHQQQFLQSQGPPPPHLLAQAHGGAAGLGLYPILWQYPNGTPTSYPPGLSMPPTPKW
VNPENPVGVNSEASLRRNTSSPWLHQAAGSTGDGLGMLSHIPVRPASADANRHSIKMNTH
ASPPLSKTSMDIHKEDFDKKGYADPIRTLTFAQLKQEQTDRSRTPTAKDVHSHRIYLDPL
SKARLAHTQDAVQAADRASKYKEENRQILKESIEVAPYTAKIQRCSDPGMDRDRDRERSR
DSAFPVRIPALTSPSPKASHAHPHIIQSEKSNYFTTLSNSVVNEPPRLYSSKELSSYYEK
PPVVVPGVVASIGAAVPSQGALSLGSHSSKISLSKPPPLIKHQPEGGEGLAGKITEQLSQ
QVTLVQQQHQHHTGIERMERRSPVISPSPSSTPSSTAPNHHHHHHHHQQQQQQHQLRAMP
SLHRAPVFHPPTQHALERKEAAEREREREKEREKERERAGYGGRLSPPTLTPIQPVSLVA
TGSKTSAEQQKPPTLLPELRDVKGHGNAAAITSVASVISGEIMTPSTEGWRVGEMIQERG
VYPGEKGMSRGKPQAAMASVIVRPSTSIRYDSLIGANKSGGVIHQDLPHGRFYPSKLHGE
CPRLGESIRELGAGRVIQSNSNMDDMCVQYKRTSVCGMQGTMGGSNANSLCRTVVSASST
FGNQNKSGAATNELGYSVSAWGEMAAHTTSIGGWVLGHSGPGEHQEGFILRTTSPGGSLP
PPSPAGTHQPSPSLTPKHSSISGSGQPLSSSFVHLKKHKAAIAAAQSRNNFSTAPTSITT
GNPSLSVDSIDKARIHSSPPPPSASQASSLSVDSSSCSSASGSTTPGKSSPLPNNHCSGS
ASTSSGQSSNYHKLKKAWLTRHSEEDRITTATTTSTSAKPEKLPSTTTTTITTITTTSTS
NTNNTTAMSEIIKPCTVNLSASTSSEVEMSKDIGSKGERERQAEDKMAAAAAGGGAGEER
KPAPLSRRGNKRSYESGSESGGDDSDTSESKMEGRAKRQPKPTYKKKQNDMAKRKGDNEK
EEDDLKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGP
NLQKCRECRVIRSKKGEEQAHSPVFCRFYYFRRLSFSKNGVIRMDAFSSPEQFDDEALAL
WAPEAIEENHLDQSTAKYILSFIGDKFCQIVVTENIATSWVKKDAKLAWKRAVRGVREMC
DACEATLFNIHWVCQKCGFVVCLDCYKAKERRSSKDKELYGWLKCVKGQPHDHKHLMPTQ
IIPGTVLTELVTSMHSMRDKHDIKSHCACTNKQNLLIKLPVSNGVSQVLQNVLNHSNKLS
LVKSEPGSLQISDPVGTKAETNGAGSPGSDIGGAPVTPPESQSPLHFLADLAEQKSREEK
KENKESVLLGKSVKEDKAVESLEVLQQCKTSSLVTNNTEQGSTLRDLLTTTAGKLKLGST
DAGIAFAPVYSSASQTGKGGRSMPNILDDIIASVVENKIPASRQNITTKLSIKQEPVTAG
CGGTNNTNLPAVTEDVKPERKKSVPVTSTVPEDSTSQYPDIPHSWFNNRRLLWLKDHRNQ
NNWKLFRECWKQGQPVLVSGIHKRLNAALWKADSFNQEFADHQGDLLNCKDQVVSNSGIK
EFWDGFEDITKRPKSKDGEPMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGN
LNLASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTANLHLEVSDVVSVLVYVGVAKGNG
VLSKTGVLKRLEEEDLDEAVRRRLKDSSETPGALWHIYLNRDSDKVREFLYKLCKEQGLD
VSPDQDPIREHGWYLSRKQRQRLQDEHGVQGWTVVQFLGDSVLIPAGAMHQVQNLHSCVQ
VINDFVSPEHVANSYHLTQELRPSKEEVNYEDKLQVKNILFHCVKEAVNSLKRSSSEEDN
EEDNS
NT seq
8838 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcgcccggagctggtcgggaagcggttcctctgtgtcagcggggac
gacccgcctgaaatcggcgacatcggccggtggccgtggaggtccggggtcatacgagcc
gtcaacaatcgtgacaacgaccatcccgacctgacggtatatgtggagtttgatgatcag
gagtgggagaagagagaatgggtcaaggtctatgaggatttccagctgtttctactggag
caccagctggtctgggccaagaggaaggagggagcaggaggagtgggagcaggtggagga
gcaggaggcctgctgcaggcaaccaaggccaaacacatacagtggcctgccctggcattt
aagccagtggtggggaagagcctgttgtcgtcagtaacagcggtggaatttttgttagac
caacagctggacttcctgtcggaccattcaacttaccaaccttaccagtctccactggca
tcaggaacttggtcaaaacagaggcagccagctctaaaaacatcatgggatgaggtggac
agtcagaacccagtgttaagagacaaccatcagctccatgaagaagtgaagggctggctt
aaagaccagaaggtgcaggaaattttcatgcaaggtccctattcgttgaatggttaccgt
gtccgtgtgtatagacaagactcagctacccaatggttcactggcatcattacacaccac
gacctctttagtcgaaatatggtcgttatgaatgaccaggtgctagagcctcagaacgtg
gatccatccatgatccagatgacctttctagatgacgtggttcactctctgctgaaagga
gaaaacattggcatcacctccagacgaaggtcacgatccagtcagaacaacaactctgcc
catatgacaggagggagacccggtgggaccactggcaacaatcagagtcattatacgcga
gcccaggccaacagcccccgccccgtcatgaactcatcaggccccaaccccaaagtttcc
caggggacattggcctcccagcagaacagccaatcacagcaaatgcaacagccaaccagc
caatcaaacctctcacctggcggcagtggacgggagcagagggagcagcgtaactctcgc
tcctccaggaggaaaggctcagacagcagcgttccagaggaagacaaggacaggagagag
gagacaactgttaaagactccaagtccaaggtgaagcaggcggtcagcaaacgtaggaag
ggcgaggaggatgagaaaaaggcgggtttaaagagactgaagactgatatgacatctgat
ctatcagagagtagtgactcagaaaacccacacaacaaaagaatcgcccattcctcatgc
tcctcttcctcctcatcatcctcgtcatcctcttcgtcctcgtcctcctcctcctcagag
ccaaactctgagaatgaactaaagactcgcagcagtgatgtaaaaccaagtgccgtttcc
aaaatggaggaagacgagaagccactaattcagggcgccaaaattaacaattcctcgtct
ctcatcggtcgcttgtctccatgggtggaacttcaagcaccagacgaaagcaagaagggt
gtgcttaaggaaacgggaaaaattgtaatgaaggaggtagaggaattggtagctttaacg
cagattgcccagtctccccgacaacagtgtctgatgcctgacaccatccaggttggcatc
gtggagagcagcaaaaacactgtgaaagcgtctcctcgatcccagagcctgtcctcatcc
aaccctcagagcagcaatgtgatcgacatcacagatgatgcccaggccacggtgcaccgt
gagagctcagaggcagtttcggcgttgctcgcctcgcagaatgcagagtccacggccctc
tcaccttaccctgccctcaacccctccccagtctcctcacctcctattccaccttctctc
tcaccatcagaaggaggccgccggaccgatgttgagcctaccatgcagcagcagcaaggc
attatgggaaatagtttaacagcagccaggactttaggaaataagatagagtttgctacc
tctgaggttatcaggcctgtcacatcgatggctgagagtctggtgctagtggagaaggag
aaaactgtccttcctcatcatcatcttcatcctcatcaacaacagcagcatcatcagcag
aacacacagcaacactactcatctatccaccctggcattaagagcccttcatctgaagag
actagaaaacatccacagcaacaaccaaacccccataagatgaacacagtccccccctct
gaagtagccaaacccaaaatgagtcctagccccaaacccagcacgcctcagcttgactct
ctgaaacagaaaccccagcaccccaacaactctcagagccactcctatcccaacactaac
ccaactgaacacctcaaaactaggtcccacccaggcctactggagatctccagacctaaa
cccaacacctctccagaggtcttcaaacacaaaataccaaggttccctgatacatcacct
cctcccacaggccgtttgtctgctaaattagaaacagcagaacctctacggtcatgtttc
aagccggtgccggcacggccccagtcggttggggtctgtatgagcagcagcagctcaaag
agtcctctgatcatcgataagaacgaaaccttcaccgtttacagggaccctgcactggtc
cgctctgacgcagagaactctgttgccgcatcagtctcttccaaccacgtggcagcctat
ctccatccccacctgcacaccctgcactccccttccccccatcccccctgcctcacccct
gcatcccatccccatgccacctcccacctcctttctgcttctcacacctctgccctacct
catccccaccttttactccctggggtgctctcagccatgcctccgcccacagcatctctc
ctcggtggccacccacggctcgactcccctggtggtttgggtcaccgcagactacctcat
ctggcagccgcacaccagcagcagttcctacagagtcagggcccccctccaccccatcta
cttgcccaggctcacggaggggctgcagggcttggcctgtatcccatcctctggcagtac
cccaatggaacaccaacctcctacccccctggactcagcatgccccccacacctaagtgg
gtcaaccctgaaaatcctgtcggcgtgaattctgaggcctctctcaggaggaacacatcc
agtccatggctgcaccaggctgctggtagcactggtgatggtctgggtatgctgagccac
attcctgtcaggccagcaagtgctgacgcaaaccgccactccatcaagatgaacacacat
gcaagccctccactttcaaagaccagtatggatattcataaagaagattttgataagaaa
ggctatgcggacccaatcaggactttgacgtttgcccagctgaaacaggagcagacggac
aggagtcgcacccccacagcgaaagatgtccattcacaccgcatctacctagaccccctt
agcaaggctcgcctggcacatacacaggatgcagttcaggctgcagacagagccagcaag
tacaaagaggagaatcggcaaatcctgaaagagagcattgaagtcgccccctacactgct
aagattcagcgctgcagtgaccctgggatggacagggacagagacagagaaagaagcaga
gattctgccttccctgtccgaataccagctctcacctcccccagccccaaggccagccac
gcccatccccacatcatccaatcagaaaagagcaactatttcaccacactgtccaacagt
gtagttaatgagcctccaagactgtactcctccaaagagctcagctcttattatgagaaa
ccaccggttgtagttccaggggttgttgccagtattggggctgctgtgcccagccaggga
gctctgtccctgggcagccacagctctaaaatctccctgtctaagccccctcctcttatt
aagcaccagccagagggaggagaaggtttagcagggaaaatcactgagcagcttagccag
caggtaacactagtccaacagcaacatcagcaccacacaggtatagagaggatggaacgc
agaagccctgtcatttctccttctccctcttctacgccttcctctactgcccctaatcat
catcatcatcaccaccatcaccaacaacagcagcagcaacaccagctcagggcaatgcca
tcgctccaccgagcacctgtcttccatcccccaacacaacacgcgctggaaagaaaagag
gctgcagagcgagagagggagcgagagaaagaaagggagaaagaacgggagagagctggt
tatggtggacgcctgtctccaccaaccctcacacctatccagccagttagcttagtggca
actggtagcaaaacatcagcagagcagcagaaacctcccacactgctgccagaactcagg
gacgtcaagggtcatgggaacgctgccgccatcacctctgtagcctctgtcataagtggg
gagattatgactccatcaacagaaggctggagagttggagagatgattcaggaaagagga
gtgtaccctggagaaaaaggaatgtcgaggggcaagccccaagctgcaatggcatcagtc
attgtacgtccatcgacatccattaggtacgacagtcttattggtgctaacaaatctggt
ggtgtgatccatcaggatctcccccatgggaggttttatccttccaagcttcatggggaa
tgtcctaggttaggggagagtattagagaacttggagctggcagggttatccaatccaac
tcaaatatggatgacatgtgtgtccagtataaaaggacctctgtgtgtggtatgcaggga
actatgggaggcagtaacgcaaactctttgtgtagaactgttgtttcagcttcatcaact
tttggcaatcagaataaatctggtgcagccaccaatgagctaggttactcagtttcagcc
tggggagagatggcagcccatacaactagcattggtggctgggtgcttggtcactcagga
ccaggagagcaccaagagggctttatcttgcgtaccacatctccaggggggtcattgcct
ccccctagtccagcagggacacaccaacccagtccaagcctcacaccaaaacatagttca
atttctggctccggtcagcctttatcctcctcctttgtccatctcaagaagcacaaagct
gccatagctgccgctcagtccaggaacaacttctcaactgcacccacctccatcacaact
ggaaacccttccttgtctgtggattcaattgacaaagctcgcattcacagctccccgcct
ccaccctccgcaagccaagcctcatcattatcagttgacagcagtagctgcagctcagca
agtggcagcactacaccaggcaagtccagtcccctgcccaacaaccactgctcaggatca
gcctcaacaagcagcggccagtccagtaactaccacaagctgaagaaagcctggttaacc
cgccactcagaggaggataggattacaactgctacaacaacttccactagtgctaaacca
gagaaactgccaagcactaccaccaccaccatcaccaccatcaccaccaccagcacaagt
aacacaaataacaccacagccatgtcagaaattatcaaaccctgtacagtaaatctcagc
gcctccacctccagtgaggtggaaatgagcaaggacattggaagcaaaggtgagagagag
aggcaggcagaggataagatggcagctgcagcagcaggcggaggagctggggaggaaaga
aaaccagctcctttatcaaggcgaggtaacaaacggtcatacgagtctggttcagagagt
ggaggagatgactctgacaccagtgagagcaagatggaaggccgagccaaacgtcagcct
aaacccacctacaagaagaagcagaatgacatggccaagaggaaaggagacaatgaaaag
gaggaagatgacctgaagcctaatggtatcttcagatcagcccgggagaagaccaaactc
aaactggccagcagcaatggcatcccccgctctgtcctgaaggactggaggaaggtaaag
aagctgaagcagacaggagagtctttcctgcaggatgactcatgttcagaaattggaccc
aacctgcagaagtgtcgggagtgcagggtgatccggagcaaaaagggagaagagcaggca
cattctcctgtattctgtcgtttctactatttcagaaggctttcctttagtaaaaatgga
gtcatccggatggatgctttctcttctccggaacagttcgatgatgaggccctggccctg
tgggcccctgaggcgattgaggagaaccaccttgaccaatccacagccaagtacatcctc
agctttattggagacaagttctgtcagatagttgtgactgagaatattgcaactagctgg
gtcaagaaggatgccaagctggcatggaagcgagcagttagaggggtgagggagatgtgt
gacgcctgtgaagcaacactcttcaatatccactgggtctgtcaaaaatgtggcttcgtt
gtctgcctagactgctacaaggcaaaggagagaaggagctccaaagataaagaactatac
ggctggctgaagtgtgtgaaaggtcaaccccatgatcacaaacacctgatgccaactcag
atcatacccggcacagtgctgacagagttggtgacttccatgcactcgatgagagataaa
cacgacatcaaatcccactgtgcctgcaccaacaaacagaacctcctcatcaaactacca
gtcagcaatggagtctcacaggttctgcagaacgtcctgaaccacagtaataagctgtct
ctggtgaagtctgagccaggctctctgcagatctctgatccagtaggaaccaaggcagag
actaatggagcaggtagtccaggcagtgatataggaggtgctcctgtcaccccaccagag
tcccagtcacctctgcacttcctggctgacctggcagaacagaagtccagggaggaaaag
aaagaaaacaaagagtctgtgttgttgggcaaatccgtgaaggaggataaggcagtagaa
agcctggaggtcctgcagcagtgtaaaaccagctccctggtaacaaacaatacagagcag
ggctccacgcttagagatctgctcaccaccacagcggggaaactgaagctgggctctact
gacgcaggaatcgcctttgcaccagtctattctagtgcttcacagactggaaagggtgga
cggtccatgcccaatatccttgatgatatcattgcttcagttgtggagaacaaaatccct
gccagtcgccagaacatcaccaccaagctgtcaatcaagcaagagcctgtcactgcaggt
tgcggcggcaccaacaacaccaacctccctgctgttactgaagatgtcaaaccagagagg
aagaagtcagtgcctgttacttcaactgtgccagaggattcaactagtcagtatccagac
attccccactcctggtttaacaacagacggttactttggctcaaagatcaccgcaaccag
aacaactggaagctgtttagagaatgctggaaacagggacagcctgtgctggtgtcaggg
atccataagcgcctgaatgctgctctgtggaaagctgactccttcaaccaagagtttgca
gaccatcagggagacctcctcaactgtaaagaccaggtggtgtccaactccgggatcaaa
gagttctgggatggatttgaggacatcaccaagcggcccaagtccaaggatggagaacca
atggtctacagactgaaggactggccgtctggagaggagttcatggccctcatgccctca
agatatgatgacttgatgaagaacctgcccctgccagagtactctgatccagagggcaac
ctcaacctggcctcccacctcccatctttcttcgtacggccagatctggggccgaggctc
tgctgtgcttatggtgtagctgcttctcaggaccaggactttgggactgccaacctccac
ttggaggtgtcagatgttgtgtccgttctggtctatgtaggagtagctaaaggcaacgga
gtcctgtccaaaaccggagtgctgaagcgtttggaggaggaggatctagatgaggcggtt
cggagaaggctcaaagactccagtgagacaccgggggcgctgtggcacatctacctcaac
agggacagtgacaaagtccgggagttcctgtacaagctctgtaaggagcagggattggac
gtgtccccggaccaggacccaatcagagagcacggctggtatctgagcaggaagcagcgc
cagcggctacaggatgagcatggagttcagggctggactgtagttcaattcctgggagac
tctgtccttataccagcaggggctatgcaccaggtccagaaccttcacagctgtgtgcag
gtcatcaatgactttgtgtctcctgagcacgtggccaactcctaccatctcacccaggag
ctgcggcccagtaaagaggaggtcaactatgaggataaattacaggtgaagaacatcctg
ttccactgtgtgaaggaggcggtgaactcgctgaagaggagcagctctgaggaagacaat
gaggaagataactcatga
DBGET
integrated database retrieval system
