Pleuronectes platessa (European plaice): 128426331
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Entry
128426331 CDS
T09923
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04136
Autophagy - other
pplt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128426331
04136 Autophagy - other
128426331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128426331
03029 Mitochondrial biogenesis [BR:
pplt03029
]
128426331
Membrane trafficking [BR:
pplt04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
128426331
Mitochondrial biogenesis [BR:
pplt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
128426331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_RSE1_2nd
EIF3I
CPSF_A
Beta-prop_NWD2_C
BCAS3_WD40
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
128426331
NCBI-ProteinID:
XP_053269141
LinkDB
All DBs
Position
21:11180517..11187285
Genome browser
AA seq
449 aa
AA seq
DB search
METEDRMETQDLPEGPAADRGFICASFNQDTTSLSVGTKTGYHLFSVTAVDKLDCIHEGV
ECSDVFIVERLFSSSLVVVVSLSLPRRMNVYHFKKGTEICNYSYSNDILSVRLNRQRLVV
CLEESIYIHNIKDMKLLKTLLNTPTNPSGLCALSVNHSNSYLAYPGSATIGEITIYDANN
LSTVTLIQAHDSPLAALTFNPSGTKLASASEKGTVIRVFGIPEGQRLYEFRRGMKRYVSI
SSLSFSADAQFLCASSNTETVHIFKLEQHSPSQDEESPTWSAYVGKMFTAASTYLPAQVS
DMMHQDRAFATVRLNMFGLKNICALATIQKLPRLLVASSDGFLYIYNVDPQDGGECVLVQ
RHRLFDSGDEQVEQSEEDKTEDVPPQAASQSYAATVALPSTPPSATTLMGYSEDGGAQKG
DVIPEHEFAESPVCLDDENEFPPVGNQSN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaggaccggatggagacccaggacctgccggagggccccgcggcggaccga
ggctttatctgcgcctccttcaaccaggacaccacttctctgtcagtgggcaccaagacg
ggctaccacctcttctcagtcactgctgtggacaaactagattgcattcatgagggagtc
gaatgttcggacgtgtttatagtggagcggctgttttccagcagtctggtggtggtggtc
agcctgtccttgccgcggaggatgaacgtctaccacttcaagaagggaacagagatctgc
aactacagctactccaacgacatcctgtccgtcaggctcaacagacagcggctggtggtg
tgcctggaggaatccatctacatccacaatatcaaagacatgaaactgctcaagaccctg
ctcaacacgcccaccaacccctcaggtctctgcgctctttccgtcaaccacagcaactcc
tacctggcgtaccctggcagtgccaccatcggggagatcacgatctatgatgccaacaac
ctgagcactgtgacgctgattcaggcccacgacagtcccttggccgccctcaccttcaac
ccctctggcaccaaactggccagcgcctcagagaagggtactgttattagagtctttggc
attcctgaaggacagagactgtatgaattccggcgagggatgaagaggtatgtcagtatc
agttccttgtccttcagtgccgatgcccagttcttgtgcgcctccagcaacactgagacg
gtccatatctttaaactggagcagcacagcccgagtcaagatgaggagtctcctacatgg
tcagcatatgtgggtaaaatgttcacagcagccagcacctatttgcccgctcaggtgtcc
gacatgatgcatcaggacagagcctttgcgactgtacgactcaacatgttcggcctgaag
aacatctgcgccctggccacgattcagaagctccctcgcctgctggtggcgtcctcggac
ggatttctctacatctataatgtggatccacaggacggaggcgagtgtgtccttgtccaa
agacacaggctgtttgactccggcgacgagcaggtggaacagagcgaagaggacaaaacg
gaggatgtccctccccaagcagccagccaatcatacgctgccactgtggcactcccttca
accccaccctccgccaccactctcatgggttactctgaagatggtggagcccagaaaggc
gacgtcatcccggagcatgaattcgccgagagccccgtctgtctggatgatgagaatgag
tttcccccagtcggcaaccagagtaactga
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