Pleuronectes platessa (European plaice): 128426410
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Entry
128426410 CDS
T09923
Symbol
sec24c
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128426410 (sec24c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128426410 (sec24c)
Membrane trafficking [BR:
pplt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128426410 (sec24c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
128426410
NCBI-ProteinID:
XP_053269235
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Position
21:8836059..8852168
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AA seq
1258 aa
AA seq
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MNVNQHTPMASPYGQPQPGYNPPGYAPLDAGYPVPYAPYNGPASAYQPGAQPQDYSPFTS
FPSKAVAATPVSDLSSPLDLGPARGPPTSGAPPVSAPQQYNQYSHSQGDMPNGPQPMTQA
PNRTPVSQPYSQGAVNMTGSQSSYPQHHGSQPTMHQVTNQMTGMQINSGPPTPAGPGYVP
PHSSQLPLSTAYSAAPSPAYKQAPPPASSAPTQLPTPRGPATSQQYYGGPMPPSQQPFNS
SVPPASQQPFTSSAQPPPSSQQNFPPSSFSGPVPPPSQGPAPPVSPPQQSFPPTQPPFSS
APPPSSQPAFISGPPPPGQGSYQPRAPPPSSQPGHFPPPGPPPTSAPPGQYPGPMPPQQQ
PPPSQPSPYHSGPSPPRVQMPPTSMAQSNHLPPGPQGQPCPPGPLQQPPSQPGMQGGYPP
QQNGAFGQVRGPQPGYAGPYPGQPNYGAPPPAPAPAPAPAAQKRLDPDSIPSPQASDMPA
VQKSRHRIDPDAIPSPIQVIEDDRAKSTEPFTTGVRGQAPPLVTTNFQVKDQGNASPRFI
RCTAYNMPCTADMAKQSQVPLAAVIKPLATLPPDETPPYLVDHGEGGPIRCNRCKAYMCP
YMQFIEGGRRFQCGFCSCVTEVPQHYFQHLDHTGKRVDCYDRPELSLGSYEFLATVDYCK
NNKLPQPPAYIFLIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPETDSVVRVGFVTYNK
VLHFYNVKASLAQPQMLVVSDVSDMFVPLLDGFLVNVNESRLVIESLLDQIPEMFADTRE
TETVFGPVIQAGLEALKAADCAGKLFVFHTSLPIAEAPGKLKNREDKKLIGTDKEKSLFQ
PQAGFYNTLAKECVAQGCCVDLFLFPNQFVDVATLAVVPVSTGGSVYKYTYFQAPSDQER
FLNDLRRDVQKLVGFDAVMRVRTSTGIRATDFYGSFFMSNTTDVELAGLDCDKAFTVEFK
HDDKLSEETGALMQCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNCETDTIINFFSKY
AFRGVLTNQTKAVRDTLINQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKS
DVLLPGADVSLDDRAYLRQLISGMDVSETHVFFYPRLLPLIKLESESLPMAVRDSEERLS
KGGVYILETGLHLFLWVGASVQQELLLNIFGTPSFSQIDPSMVNLPELDNPFSQRLREII
ESFRAQRPRYMKLMVVKQEDKAELIFRHFLVEDKSASGGASYVDFLCHMHKEIRQLLS
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaccagcacactccaatggcctctccgtacggccaaccccagcctggctac
aaccctcctggctacgctcccctggatgcgggatatcctgtcccgtacgcaccctacaat
ggccctgcttcagcctaccagcctggggctcaaccacaagattattctcctttcacaagc
tttccctctaaggctgtggcagccaccccagtctctgacctctcctctcctcttgactta
ggtcctgccaggggtcctcccacatctggagccccgccagtctcagcgcctcaacaatat
aatcagtacagtcacagtcaaggggacatgccaaatggaccccaacctatgacacaagca
ccaaacaggactcctgtatctcagccgtacagccagggagctgtgaacatgacagggtcg
caatccagctatcctcaacaccatgggtctcaacccacaatgcatcaggtcaccaaccag
atgactgggatgcagatcaactctggaccgccaaccccagcagggccaggatatgttcca
cctcactcctcccagcttccactcagtaccgcctattctgccgcaccttcgcccgcctac
aaacaagcccctccaccggcgtcctcggctcccacccagctgccaactcccagaggacct
gcaacttctcagcaatactacggaggcccaatgcccccttctcaacaaccattcaactct
tctgttcctcctgcctctcaacagccgttcacctcctctgcacagccccctccttcctct
caacaaaacttccctccctcttccttctcaggtcccgtgcctccaccaagccaaggtcct
gctcctccagtgtccccaccacagcagtccttccccccaacccagccccccttctcttca
gcacccccaccttctagccagcctgccttcatctctggtccgcctccccctggccagggc
tcctaccaacccagggcaccccctccttcctctcaaccaggacattttcctccccctggt
ccccctcccacctccgctccccccggccaatacccaggccccatgccacctcaacagcaa
ccccctccatcccagccatcaccttatcactcaggaccgtctcctcccagagttcagatg
cctccaacttccatggctcaaagcaaccacctgcctccaggaccacagggccagccgtgc
cctcctgggcccctgcagcagcctccatctcagcctggtatgcagggtggataccctcct
cagcagaatggtgcttttgggcaggtgagaggccctcagcctggctatgcaggcccttat
cctgggcaaccaaactatggagcccctccaccagcaccagctcctgctcctgctccagct
gcacagaaaagacttgacccagattccattcctagcccgcaagcgtctgacatgccggct
gtgcagaaatcaagacatagaatagatccagacgctatccccagcccaatccaggtaata
gaggatgacagggctaagagcactgagccattcactacaggggtcagaggtcaggcccca
ccgctggtcaccaccaactttcaggtcaaagaccaagggaatgccagtcccaggtttatt
cgctgtacagcgtacaacatgccttgcacagccgatatggccaagcagtctcaagtgccc
ctggccgccgtcatcaagcccctcgccacactgccaccagatgagaccccaccgtacctg
gtggaccatggcgagggtggtccaatccgctgcaaccgctgcaaggcctacatgtgtcca
tacatgcagttcatagagggcgggcgccgcttccagtgtgggttttgcagctgtgtcaca
gaggtgcctcaacattacttccagcatctggaccacactggtaagagggtggactgctat
gacaggccggagctttcgctgggcagctacgagttcctggccactgtcgactactgtaag
aacaataagctccctcagccgccagcctacatcttcctcatcgatgtgtcctacaacgct
gtgaagagcggcatggtcaacatcgtctgccaggaactcaagacccttctcgactacctg
cccagggagaacccagaaacagattctgtggtgcgggtgggttttgtcacctacaacaaa
gttttgcacttctacaatgtcaaggcgagcctggcccagccacagatgttggtggtatcg
gatgtgtcggacatgtttgttcccctgctcgatggtttcctggtcaacgtaaacgaaagc
cggctagttattgagagtttactggaccagatcccagagatgtttgcagacaccagggag
acggagacggtctttggacctgtaatccaggcaggactggaggcactaaaggctgcagat
tgtgctggaaagctgtttgtattccacacctctctgccaatcgcagaggctcctggaaaa
ttaaagaacagagaagacaagaagctgattgggacggataaggagaagtctctgtttcag
ccccaggccggcttctacaacaccctcgctaaggagtgtgtggcccagggctgctgcgta
gatctcttcctcttcccgaaccagtttgtggatgttgccacgttagcagtggttcccgtc
tccaccggaggttcagtctacaaatacacttacttccaggctccatctgatcaagaacga
ttcctgaatgacctcaggcgagacgttcagaaactagtaggttttgatgctgtcatgagg
gtgcgaaccagcacaggtatcagagcgacagacttctacggctccttcttcatgagtaat
accacagatgtggagctggcaggcctggactgtgacaaggccttcactgtcgaattcaaa
cacgatgacaagctcagcgaggagacaggggcactcatgcagtgtgccgtgctgtacacc
agctgcagtggacaaaggcgtctccgcgtccataacatggctgtcaactgttgctctcag
ctggctgacctctatcgcaactgtgagacagacacgatcatcaacttcttctccaaatac
gctttccggggcgtcctgaccaaccaaactaaggcggtgagggacactctgatcaatcag
tgtgcccagattctggcctgctaccggaagaactgtgccagcccgtcatcggctggtcag
ctgattctcccagagtgcatgaagctgttacccgtctatctgaactgcgtgctgaagagc
gacgtgctgctgccgggagccgacgtctcgttggacgaccgggcttacctgaggcagctg
atcagcggcatggacgtctcagagacccacgtctttttctacccccgcctactgccactg
atcaagcttgaaagcgagtcgttgccgatggcagtgagggactcagaggagaggctgtcg
aagggaggagtatacatcctggagacggggctccacctcttcctgtgggtgggagccagc
gttcagcaggagctgctgctgaacatctttggcacgccgagcttcagccagatcgacccg
agcatggtaaatctaccagagctggacaacccgttctctcagagactccgagaaattatt
gagtccttcagggcacagcgaccacgatacatgaagctgatggtggtgaaacaggaagac
aaagccgagctgatattcaggcacttcctggtcgaggacaagagcgccagcgggggagcg
tcatacgtggacttcttgtgtcacatgcacaaggagatccgccagcttctcagctag
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