KEGG   Pleuronectes platessa (European plaice): 128426556
Entry
128426556         CDS       T09923                                 
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    128426556 (vti1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pplt04131]
    128426556 (vti1a)
Membrane trafficking [BR:pplt04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    128426556 (vti1a)
SSDB
Motif
Pfam: V-SNARE V-SNARE_C Sec8_N Sec20 Laminin_II Mer2 BPS1 DUF1664 DUF5344
Other DBs
NCBI-GeneID: 128426556
NCBI-ProteinID: XP_053269452
LinkDB
Position
21:complement(6247328..6354656)
AA seq 217 aa
MSSDFEAYEQDFGTATAEITNKIGRVPKLSGEEKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPVQSRGMFNSRLKSYKQEMEKLEKDFKRSRIAYSDEVRHDLLGDDAGSSENQRAHLLD
NTEKIERSSRRLEAGYQIAVETEQVGQEILANLHTDREKIQRARERLRETDANLGKSSRI
LTGMLRRIIQNRVLIFILGAIILLTVILAIYFNLRGH
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtcttcagacttcgaagcttacgagcaggacttcgggaccgccacggccgagataacc
aacaaaatcggcagagttcccaaactgagcggggaggagaagacgcagctggttctaaat
gtcgacaaacagcttgaagaagtcagagagttgctggagcagatggacctggaggtgcgg
gagatccccgtccagagtcgaggcatgttcaacagccgactgaagagctacaagcaggag
atggagaagctggagaaagactttaaaaggtcacgcattgcctacagtgatgaggtgcgc
cacgatctcctgggggacgacgccggctcctccgagaaccagagagcgcatctgttggac
aacacagagaagatagaaaggtcatcgcggagactggaggccggctaccagatagcagtg
gaaactgaacaagtgggccaggagattcttgccaacctgcacaccgaccgtgagaagatc
cagagagccagagaaagactgagagaaacagacgccaacctgggcaagagttctcgcatc
cttaccggcatgctgagaaggatcatccagaaccgtgtcctgatcttcatcctcggagcc
atcatcctgctcaccgtcatcctggccatctatttcaatctgcggggccactga

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