Pleuronectes platessa (European plaice): 128426846
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Entry
128426846 CDS
T09923
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pplt03016
]
128426846 (trub1)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
128426846 (trub1)
Transfer RNA biogenesis [BR:
pplt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128426846 (trub1)
Prokaryotic type
128426846 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
128426846
NCBI-ProteinID:
XP_053269871
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Position
21:complement(20633794..20646747)
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AA seq
285 aa
AA seq
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MAGNMSISLAPITSSLSKLQSLNGLFAIYKKQGPTSAELLNTFKEALLKEAGVQNTNPRK
RKKQSLKLGHGGTLDSAASGVLVVGVGYGTKKLSTMLAGSKKYVTVGELGKATDTLDATG
KVILEKDFEHITRQDFEEKLKSFTGDIMQVPPLYSALKKDGQRLSVLMKKGHTVEAKPAR
PVTVYNLTLQEFKPPFFTLDVDCGGGFYVRSLVDDLGKALSSCAHVKNLVRTKQGQFTLE
EHALHEEQWTLEHVLQSLQPCTESEQGTKPSDQHNVNRTQAKNMT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaacatgagtatcagccttgcccctataactagttctctgtctaaattgcag
tctctgaatgggctctttgccatttataaaaaacaaggccctacgtctgcagaattgttg
aatacgttcaaagaggctctgctcaaagaagccggtgtacaaaacacaaatccgcgaaag
agaaagaagcagagcttgaagctggggcacggagggactctggacagtgctgccagtgga
gtgttagttgtcggtgttggatatggcacaaaaaagctcagtaccatgttagcgggctca
aagaaatatgttactgtgggggagctgggaaaagcaacagacactcttgatgctactggt
aaagtgattctagagaaagactttgaacacattaccaggcaggactttgaggagaagctg
aaatccttcactggtgacatcatgcaagttcctccactctactctgctctgaagaaggat
ggccagcgtctgtctgtcctgatgaaaaaaggtcacacggttgaggccaaacctgctaga
cctgtcactgtgtacaacctgactctgcaggagtttaagcctcctttcttcactctagat
gttgactgtggtgggggattttatgtcagaagcttggtggatgacctggggaaagctctc
tcatcctgtgctcatgtgaagaatctggtgcggaccaagcagggacagttcaccctggag
gagcatgccttacacgaggagcagtggacactggagcatgtcttgcagtctctgcaaccc
tgtacagagtcggagcagggtactaaaccatcagatcaacacaatgtgaacaggacccag
gctaagaatatgacataa
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