Pleuronectes platessa (European plaice): 128427009
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Entry
128427009 CDS
T09923
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03020
RNA polymerase
pplt04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128427009 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
128427009 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128427009 (polr3a)
Enzymes [BR:
pplt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128427009 (polr3a)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
128427009 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
128427009
NCBI-ProteinID:
XP_053270063
LinkDB
All DBs
Position
21:7015711..7037109
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKRTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
DKLLFNDLLKRPNLAYLQKRGLKKKISDKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDQFVSDFLQSFDIAIEHNKVMEPLLTRAQENLNPLVVLNLFKRIPQEDIPLLLM
NPESGKPADLIFTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELLRKLVRNGPDVHPGANF
LQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLMDGDIVLFNRQPSLHKLSIMAHIATV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKTCQIVASILVGKDEKVKITLPHPAIMKPMALWTGKQI
FSLILKPNKECPVRANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGTLDKGTLGSGSK
KNIFYILLRDWGQEEAASAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLQAKQDLLDDG
YKKCDEYIKALKTGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLVM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDVIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCPDEPALSQNELVLTADVVMKRADFLC
CRDSFLEEIKKFTKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQTLKDDLPKVV
VQGIPEVSRAVIHIDEQSGKNQYKLLVEGDNLRAVMATHGVKGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMTNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYYGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDLSPAKRPLLFD
SADFHVPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagttcagagagacggatgtggcgaagaaaataagccacatctgcttt
gggatgaaatcagccgagcagatgcgtcagcaggctcacatccaggtggtcagtaagaac
ctgtacagccaggacaccaaacgcaccccactgccctatggagtgctggaccaccgcatg
ggcaccagtgagaaagaccgaccgtgtctgacttgtgggaagaatctggcagattgtttg
ggacattacggatacctggacctggagctgccatgttttcatgtgggctatttcaaagcc
accataggaatcttacagatgatttgcaagacgtgttccagcataatgttgacgaaagaa
gacaaactgcttttcaatgatttattgaaacggcctaacctggcctatctccagaaacga
gggctgaagaagaagatctctgataaatgccgcaagaggacggtctgtctgaactgttcc
gcttttaatggtccagtgaaaaagtgcggcctgcttaagatcatccatgagaagtataaa
acaaccaagaaggtggtggatcagttcgtgtcagatttcctgcagtcttttgatatcgcc
atcgagcacaacaaagtgatggagcccctgctgaccagagcgcaggaaaacctgaaccct
ctagtggtgctaaatcttttcaagaggattccccaagaagacattcccctgctcctgatg
aatcctgaatcaggaaaacccgctgacctcatcttcacccgcctcctcgtgcctccgctc
tgcatacgaccctctgtggtcagtgacctgaagtcgggcaccaacgaggacgacctcacc
atgaagctcacagagataatcttcctcaacgacgtgatcaaaaagcatcgaatgacaggg
gctaagactcagatgatcatggaagactgggatttcctgcagctgcagtgtgccctttat
attaacagcgagctttctggtatcccactcaacatggcccctaagaaatggaccagaggc
ttcgtgcagagactgaaggggaagcaaggtcgattcagaggaaacctctcggggaaacga
gtggacttctctggtaggactgtaatttctcccgatccgaatctgaggatcgatgaagtg
gctgttccggtgcatgtggctaaaatcctgacgtatccagagcgggtgaacaaggccaat
ctggagctattgagaaaacttgtacgcaatggtcctgatgttcaccccggagccaacttc
ctccagaaccgtcacacgcagatgaaaaggtttttgaagtacggaaaccgtgagaagatc
gcacaggagctgaggttcggtgatgtggtagaaagacacttaatggatggagacatcgtc
ctcttcaatcgacaaccatctttgcacaagctcagtatcatggcccacattgccacagtc
aaacctcacaggacattcaggttcaacgagtgcgtgtgcactccctacaacgccgacttt
gacggtgatgagatgaacctacatctacctcagactgaagaggccaaagctgaggccctg
gtcctgatggggacaaaagctaatcttgttactccaagaaacggtgaacctctgattgct
gctattcaggactttctgacaggggcgtacctcttgaccctgaaggacactttcttcgac
agagccaagacctgtcagatagtggcatcgatcctggtgggcaaagatgaaaaagtcaaa
atcactctcccccacccggccataatgaagcccatggctctgtggacaggcaagcagatc
ttcagcctcattctgaagccgaataaggaatgtccagtgagggccaacctgcggaccaag
ggaaaacagtactgtggcaagggagaggatctctgtcacaacgactcattcgtggtgatc
cacaacagtgagctgatgtgtggcactttggacaagggcaccttgggatcgggctccaag
aagaacatcttctacatcctgctgcgagactggggacaggaggaggctgccagcgccatg
tcccgtctggcgagactcgctccagtctatctctccaaccgaggcttttctattggaatt
ggtgatgtgacacctggccagggtctgctgcaggccaagcaggacctgctggacgatggt
tacaagaagtgtgatgaatacattaaagctttaaagacgggcaagttgcagcagcagccg
ggctgttcagcagaggagaccctggaggctctcattctgagagagctgtccgtcatcaga
gaccgagctggaagtgcctgcctcagggagctggacaagagcaacagccctctggtcatg
gctctttgtggctccaaaggatccttcattaatatctcccagatgattgcctgtgtggga
cagcaggccataagtggctctcgagtacctgacgggtttgagaatcgctccttgcctcac
tttgaaaagcactcgaagctgcctgctgctaaaggctttgtggccgacagcttctactcc
ggcctgacgccaacagagttctttttccacaccatggctggtcgagagggtctggtggac
actgctgtgaaaactgcagagaccggctacatgcagaggcgactggtgaagtccctggag
gatttgtgctcgcagtacgacctgacggtgcgcagctccaccggcgacgtcatccagttt
atttatgggggtgacggcctggaccccgctgccatggagggaaaggatgagccgctggag
ttcaagagggtcctggacaacatccgagcggtctacccgtgtccagatgagccggcgctc
agtcaaaacgagctggtcctcaccgcggacgtggtcatgaagagggcggacttcttgtgc
tgcagagacagcttcctcgaggagataaagaaatttaccaagagcatctcagaaaggatc
aagaagacccgggacaagtacggcatcaacgacaacggcaccagcgagccaaaagttctg
tatcagctggaccgcatcaccccgactcagctggagaagttcctggaaacctgcagagac
aaatacatgagagctcagatggagccgggctcagccgtcggcgccctgtgtgcccagagc
atcggagagccgggtactcagatgaccctgaaaaccttccactttgctggtgtggcgtcc
atgaacatcaccctgggggtgcctcgcatcaaagagatcatcaatgcctccaagaacatc
agcactcctataatcacggctcatttggatgtggaggatgacgctgactttggccggctg
gtgaaggggaggattgagaagactctcctgggagagatctctgagtacatcgaagaggtc
tttctacctgatgactgtttcatcctggtgaagttgtccctggagagaataaggctgctg
cgactggaggtaaacgcagaaacggtgcgttactcgatctgcatgtcgaagctccgggtg
aaaccaggagacattgccgtgcacggcgaggcggtggtgtgtgtgtccccacgagagaac
agcaagagctccatgtactacgtgctgcagacactaaaagacgatcttcctaaggtggtg
gtgcaaggaataccagaggtcagccgagccgtcatccacatcgacgagcagagcggcaag
aaccagtacaagctgctggtggagggggacaacctgagagctgtcatggcgacgcatggt
gtgaagggcagcaggaccacttcaaacaacacatacgaggttgagaagaccttggggatt
gaagctgcgagatccacaatcatcaatgagattcagtacacgatgacgaaccatggaatg
agcattgaccggcgtcacgtcatgctcctcgctgatctcatgtcctataagggggagatt
ctgggtatcaccaggttcggtttagccaaaatgaaggagagtgtgctcatgttggcctcc
ttcgagaaaacagccgatcatctcttcgacgccgcctactacggacagaaagactcagtt
tgtggtgtgtccgagtgcatcatcatgggcattcccatgaacatcggaaccggattgttt
aaactcctgcacaaagccgacaaagatctgtctccagcgaaaaggcctctcctgtttgac
agtgcagactttcacgtgcctctcatcacatag
DBGET
integrated database retrieval system
