Pleuronectes platessa (European plaice): 128427014
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Entry
128427014 CDS
T09923
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128427014 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128427014 (gspt1)
03012 Translation factors [BR:
pplt03012
]
128427014 (gspt1)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128427014 (gspt1)
Translation factors [BR:
pplt03012
]
Eukaryotic type
Release factors
128427014 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
PAM2
Motif
Other DBs
NCBI-GeneID:
128427014
NCBI-ProteinID:
XP_053270068
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All DBs
Position
21:complement(12813190..12821467)
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AA seq
600 aa
AA seq
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MDPRDTAPDSWELEEDAEAPAAAAAAELPGALAALNVNARPFVPNVNAAVFVPTFLHSGG
AELPVADGAPDPAAGMDVAETAGTHPHFAPGSACSVPAPVENGGTEADMTTEEETWEQKE
EPGGGGGGSDDLGTGGECEEGAAGKEDEEMMEEEEEEIPVPKMAPAPPDAPKKEHVNVVF
IGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKT
VEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQ
TREHAMLAKTAGVKHLIVLVNKMDDPTVHWSLERYEECKEKLVPFLKKVGFNPKKDIHFM
PCSGLTGSNLKDPVPECTWYTGLPFISHLDSLPNFTRSTDTAVRLPIVDKYKDMGTVILG
KLESGTISKAQQLVMMPNRHTVEVLSLLSDDVETDDATPGENLKLRLKGIEEEEILPGFI
LCSPDNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEIQITALICMVDKKSGEK
SKTRPRFVKQDQVCIARLRAAGVICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacacagccccggattcgtgggagctggaggaggatgccgaggccccg
gctgctgccgcggcggcggagctcccgggcgccctagccgccctcaatgtcaacgccagg
ccgttcgtccccaacgtgaacgccgcggtgttcgtgccgaccttcctccatagcggcggc
gcggaattgccagtcgcagacggtgcccctgatccagcggccggcatggacgtggcggag
acagccggtacgcatccacactttgccccaggctctgcgtgttcagttccagctccggtg
gagaatggaggcacggaggcagacatgaccacggaggaagagacgtgggagcagaaggag
gagccaggaggaggtggcggaggatcggacgacctggggacaggaggagagtgcgaggaa
ggcgccgcggggaaagaggacgaggagatgatggaggaggaagaggaggagataccagta
cccaaaatggctccggcaccgccggacgccccaaagaaagaacacgttaatgtggtcttt
atcggtcacgtagatgccggcaaatcaactattggaggacagataatgtacttaactgga
atggtggagaagcgaaccctcgaaaaatatgaaagagaagcgaaagagaagaacagggag
acatggtacctgtcgtgggctctggacacaaaccaggaggagagagacaaaggaaagacg
gtggaagttggcagagcttattttgagactgagaaaaaacatttcaccatcctcgatgcc
ccaggacacaaaagctttgtccccaacatgatcggtggagcgtcgcaagctgacctggca
gtcctggtgatttctgcgaggaagggggagtttgagaccggctttgagaaaggaggacag
acccgggaacacgccatgctggctaaaacagcaggagtcaagcatctcattgtcctggtt
aacaagatggatgaccccactgtccactggagcctggaaaggtatgaggagtgtaaggag
aagctggtgccatttctgaagaaggtgggcttcaaccccaagaaggacatccactttatg
ccttgttcaggactcacaggttccaacctcaaggaccctgtacccgaatgcacctggtac
acgggtttgccatttatttcccacctggacagtttgccaaatttcaccagatccactgat
acagcagtcagactaccaatcgttgacaagtacaaggatatgggcacggtcatccttggg
aagctggagtctggaaccatcagcaaagcccagcagctggtcatgatgccaaacaggcat
acagtggaggtactgagcctgctaagcgatgatgtggagacggacgatgcaactccaggg
gagaatctgaagttgcggctgaaaggcatcgaggaggaagaaatcctgcctgggtttatt
ctctgcagccccgacaacctctgccactccggtcgcacctttgatgcacagatcgtcatc
attgaacacaaatcaattatttgtcccggttacaatgcagtccttcacatccacacctgc
attgaagaaattcaaatcacagccttaatctgcatggtggacaagaaaagtggagagaaa
agcaaaacacgaccacgcttcgtaaagcaggaccaggtctgtatcgcaaggctccgggca
gcaggggtcatctgcttagaaaccttcaaagacttccctcaaatgggacgattcacgctg
cgagatgaaggcaaaaccatcgccatcggcaaagtgctgaaacttgtgccagaaaaggac
taa
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