Pleuronectes platessa (European plaice): 128427268
Help
Entry
128427268 CDS
T09923
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04145
Phagosome
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
pplt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128427268
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128427268
09144 Cellular community - eukaryotes
04510 Focal adhesion
128427268
09142 Cell motility
04820 Cytoskeleton in muscle cells
128427268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128427268
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128427268
00536 Glycosaminoglycan binding proteins [BR:
pplt00536
]
128427268
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Phagocytosis
Opsonins
128427268
Exosome [BR:
pplt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128427268
Exosomal proteins of colorectal cancer cells
128427268
Exosomal proteins of bladder cancer cells
128427268
Glycosaminoglycan binding proteins [BR:
pplt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128427268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
128427268
NCBI-ProteinID:
XP_053270331
LinkDB
All DBs
Position
21:complement(8359320..8368859)
Genome browser
AA seq
961 aa
AA seq
DB search
MSPLRGFFWLLMFLYAGSAKVDNVSSQTCRHPCEELVGVLTEIHGLRLVTGNLLEDLERV
TKENEEMRITLDELSNSSSISISSYTSKSDISSISSGAGGGGDDSDLDRDRDGEPWCLQD
GRVYEQGEDWEVDSCTSCTCLEETVVCQQVSCPPVSCIYTSFIDGGCCPVCVNNEDGWSP
WSEWTHCSVTCGRGGQQRGRSCNGIMPSCAGPSVQTRSCMLTKCDRKVRADGNWGLWSPW
SPCTTTCGEGSSARVRLCNNPPPPKGGRGCSGGATETRPCNNTLCPIAGGWTTWSEWSLC
SESCGGGLSSRQRACLNPAPQNGGKTCAGVAADYDACNKQPCPIDVCLLSRPCFPGVACT
SHTDGSWECEGCPVGLNGNGTHCEDENECEVEGVCVTECVNTDPGFYCLPCPPRYKGTQP
YGLGLQEAQKTRQVCEPYNPCKDKTHTCHKYAVCTYLGLASEVLYKCVCATGFAGDGFLC
GEDSDLDGWPNNILTCKQNATYHCQKDNCPRLPNSGQEDLDKDGQGDACDPDDDNDGIID
ERDNCPLVYNPRQYDSDRDGVGDSCDNCAFDSNPLQADTDGNGEGDACSIDIDGDEVLND
RDNCPLIYNTDQRDTDMDGVGDQCDNCPLLHNPLQLDSDSDLVGDMCDDNDDIDEDGLQN
SLDNCPYIANSNQADHDNDGKGDACDHDDDNDGIPDDRDNCRLVPNTDQLDLNGDGSGEA
CFDDFDNDSIPDALDPCPLNQDISSTDFRRFQVVLLDPKGTTQSEPFWVIRSQGTELLQT
ANSDPGIALGYDKFSAVDFSVTFYVNTNRDDDYAGFVFAYQSSQRFYVVMWKQVSQAYWE
KKPSKAFGTAGVSIKLVNSTTGPGEYLRNALWHTGNTRHQVRTLWHDPNKTGWKDYTAYR
MHLTHRPKTGFIRVVVYEGREIMTDSGAVYDHTLAGGRLGLFVFSQEHVIFSDLRYECRD
N
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgctgaggggtttcttctggcttttgatgttcctctatgcaggcagtgcaaag
gtcgacaatgtgtcgtcgcaaacctgccgtcatccgtgtgaggagctggtgggtgtgctg
acggagatccacggcctgcgccttgtgaccggcaacctgctcgaagacctggagagagta
actaaagaaaatgaagagatgcgcataactttggatgagctgagcaacagcagcagcatc
agcatcagcagttacacgagcaagagtgacatcagcagcatcagtagtggtgctggcggc
ggcggtgatgacagtgatcttgacagggacagagacggcgagccctggtgtttgcaggac
ggacgagtgtacgagcagggagaggactgggaggttgacagctgcacctcctgtacctgt
ctggaagaaacggtggtgtgtcagcaggtgtcgtgccctcctgtttcctgcatctacacc
tcctttattgatggaggttgctgccctgtctgtgtcaataacgaagacggctggtcccca
tggtctgagtggactcactgttctgtcacctgtggacgtggagggcagcaaagaggccga
tcatgcaacggcatcatgccgtcctgtgccggcccatcagttcaaacccgcagctgcatg
ctgacgaaatgtgaccgaaaggtgcgtgctgacgggaactggggcctttggtctccttgg
tctccttgtacaaccacatgcggagagggaagcagtgcacgggtacgtctgtgcaacaac
cctccgccacccaaggggggcagagggtgctcaggcggggccacagagacacgaccttgc
aacaacacactctgccccattgctggaggctggacaacctggtctgaatggtcattgtgc
tcagagtcttgcggaggaggtctttcaagtcgccagagagcgtgcttgaaccctgccccc
cagaatggcgggaagacttgtgctggagtcgctgcggactatgacgcttgtaacaaacaa
ccatgtcctatagacgtgtgcttgctgtcacgtccatgttttcccggtgtggcgtgcaca
tcacatactgatggatcgtgggagtgtgaaggctgtccagtgggtttaaatggcaatggt
actcactgtgaagatgaaaatgagtgtgaagtggagggtgtgtgtgttacagagtgtgtc
aacacagacccagggttttactgcctgccctgtcctcctcgttataaaggcacacagcca
tatggccttggactgcaggaagcccagaaaaccagacaggtgtgtgaaccatacaatcct
tgcaaagacaagacacacacctgccacaagtatgctgtatgtacgtacctgggtctggca
tctgaggtcttgtacaagtgtgtgtgcgcgaccgggtttgcaggcgatggctttttgtgt
ggcgaagactccgacctggatggatggcccaacaacatattgacctgcaagcaaaacgcg
acctatcactgtcaaaaggacaactgccccaggctaccaaactctggacaggaagacctg
gacaaggacggacagggagacgcctgtgatcccgatgatgacaacgatggcatcatagat
gagagggacaattgcccactggtgtacaaccctcggcagtacgattctgacagagacggg
gtcggggacagttgtgacaactgtgcgtttgatagcaacccactgcaggcagacaccgat
ggcaacggagagggagacgcctgcagcattgacatagatggagatgaggttctgaatgac
cgcgacaactgtcccttaatctacaacactgaccagagggacacagacatggacggtgtc
ggagaccagtgcgacaactgtccccttctacacaacccactgcagcttgactctgacagt
gacctagtgggggacatgtgcgacgacaacgatgacattgatgaggacggcctccaaaac
tctctagacaactgtccctacatcgccaatagcaatcaggccgaccatgataatgacggg
aagggagatgcctgtgaccacgacgatgacaacgacggtatccctgatgaccgggacaac
tgccgactagtgcccaacacagaccagctggacttgaatggtgatggcagcggagaagca
tgttttgacgactttgacaatgacagtattccagatgcactggatccgtgtccactgaac
caagacattagctctacagacttcaggaggtttcaggttgttttgttggacccgaaaggc
accacgcagtctgaacccttctgggtgatccgcagccagggcacagagttgctgcagaca
gcaaactccgacccaggcatcgctttaggatacgacaagttcagtgctgtggacttcagc
gtaactttttatgtgaacaccaaccgagatgacgactacgcaggcttcgtgttcgcctac
cagtccagtcaacgcttctacgtggtcatgtggaaacaggtgtctcaggcctattgggag
aaaaagccgtccaaagcgtttggaacagcgggcgtctccattaaactggtcaattccacc
acagggccaggggagtatctccgcaatgccctctggcacaccggaaataccagacaccag
gtcagaacactgtggcatgaccccaataagactggctggaaggactacacggcttatcgc
atgcaccttacccacagacccaagactgggttcatcagggtggtggtgtatgagggcagg
gagattatgaccgactcgggggcagtgtacgaccacaccctggctggaggccgactggga
ctgtttgtcttctcacaggaacacgtcatcttctcggacctcagatacgagtgcagagat
aactga
DBGET
integrated database retrieval system
