Pleuronectes platessa (European plaice): 128428415
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Entry
128428415 CDS
T09923
Symbol
cald1a
Name
(RefSeq) caldesmon 1a isoform X1
KO
K12327
caldesmon
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
128428415 (cald1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pplt04812
]
128428415 (cald1a)
Cytoskeleton proteins [BR:
pplt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
128428415 (cald1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
128428415
NCBI-ProteinID:
XP_053270544
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Position
22:complement(9836229..9887918)
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AA seq
561 aa
AA seq
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MEEMDFEQRRELRRQKREEMRLEAERLAKNDDDEEEAARERRRRARQERLKTRDGEEPSG
QQDSLVMTNSHSVTETVSVSSSYGGGGDDEDQALLDRMAKREERRQRRMKEALERQRQGD
PAETEDNGSVAMEKNNDGEERPSSCRGGRYRDNNEEEEEKTFTYSSRRDEKHREEPREEE
EAAPGGGEEADEGVDEEEEQEVEVVEDKPRRSYLREQESAEEPKTQNKVNERGGAREERE
EQRKQNGGLHEDEAPKQHRKPERTLSRGSVRSTEVSVVDDEQDDDDARLEAERKLEELKR
RRDDAESEEFERMRQKQQEAEVELEELKRKREDRRKVLDEEEKQKKQEEEDRKNREEEEK
RKMKEEIERRRAEAAEKRQKVEDIVDGDDKPFKCVSPRGSSLKIGERAEFLNKSAQKSTV
KAAQSPVVSKIDNRLEQYTSAAQRENKESRSPRSGAVDLPMVTDSIRNIKSMWERGSVFS
SPGGGGNTFKEAAVMKTGVAGRINDWLNKTPESGKTPGGRPADLKPVDVTNKRSLWENKG
ASPTKVAGRGDTKSVANGMGH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatggactttgagcagcgccgggagctgaggaggcagaagcgggaagagatg
cgcctggaagccgaaaggttggcaaagaatgatgatgacgaagaagaggcggctcgcgag
agaaggcgcagggcacgccaggagaggctgaagaccagggacggcgaggagcccagtgga
cagcaagacagcctggtcatgaccaatagccacagtgtgacagagacagtgtctgtgagc
agctcttatggaggcggtggggatgatgaggaccaagccctgctagaccgcatggccaaa
cgcgaggagagacggcagaggcgcatgaaagaggcgctggagagacagaggcagggggac
cccgctgagacagaggacaacggcagcgtcgccatggagaaaaacaatgatggggaggag
aggccctcatcctgtcgtgggggtcgttaccgtgataataatgaagaggaagaggagaag
acgttcacgtacagctccaggagagacgagaagcaccgagaggagccaagagaggaagag
gaggctgctcctgggggcggagaggaagcagatgagggtgtggatgaagaggaggagcag
gaagtggaagtggtggaggacaaaccgagaaggtcttacctgagggaacaggaatcagct
gaagagcctaaaactcaaaacaaggtgaatgagaggggcggggccagggaggagagggag
gagcaaaggaagcagaacggagggctgcacgaggacgaggctcccaaacaacacaggaaa
cctgagaggaccctgagtcgcggaagtgtacgctccactgaggtgtccgtggtggacgac
gagcaggatgacgacgacgctcgcctggaagcggagcgcaagctggaggagctgaagcgt
cgccgcgatgatgcagagagtgaggagttcgagaggatgaggcagaagcagcaggaggcc
gaggttgagctggaggagctgaagaggaagagggaggacaggaggaaggtgctggatgag
gaggagaagcagaagaagcaggaggaggaagacaggaaaaaccgagaagaggaggagaaa
aggaagatgaaggaggagattgaacggaggagagcggaggcggccgagaagagacagaag
gtggaggacattgtggacggcgatgataaaccctttaagtgtgtcagcccccgaggctct
tccctgaagatcggagagagggcagagttcctgaacaagtcggcacagaaaagcacagtg
aaggcagctcagtctcctgtggtgtccaagatagacaacaggctggagcagtacacctca
gctgctcagagagagaacaaggagtctcgatcccctcgctccggagcggtggatctgccc
atggtcactgacagcatacgaaacatcaagagcatgtgggagagaggcagcgtgttcagc
tcacccgggggcggcgggaacacgttcaaggaagcagctgtgatgaagacaggcgtggca
ggccgcatcaacgactggctgaataaaacccctgagagcggcaaaacaccaggaggaagg
ccagcggacctgaagcctgtggatgtcaccaacaagaggagtctatgggaaaataaaggt
gcctctccaaccaaggtggcaggcagaggggacaccaaatcagtcgccaacgggatgggg
cactaa
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