Pleuronectes platessa (European plaice): 128428543
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Entry
128428543 CDS
T09923
Symbol
trim24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pplt01001
]
128428543 (trim24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128428543 (trim24)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128428543 (trim24)
Protein kinases [BR:
pplt01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
128428543 (trim24)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128428543 (trim24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-RING_5
PHD-1st_NSD
FemAB_like
PRANC
Motif
Other DBs
NCBI-GeneID:
128428543
NCBI-ProteinID:
XP_053270723
LinkDB
All DBs
Position
22:9480982..9495573
Genome browser
AA seq
1122 aa
AA seq
DB search
MDERVDNDDIVIIVENEAESLPAQEERLKQPGTIGLMDTCPSCKLSFHNREPKLLPCLHS
FCKRCLPPPFRSADPRRDSQGQVDNNKPLGALRCPVCRQECWEMDVLDNFFVKDSAEMPS
STMEKSSQVCMSCDDNTEATGYCVECVEFLCLTCIEAHQRVKFTRDHTIRQKEEMSPEAV
GLSTQKPVFCDVHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDAYRNHKQYLENM
TQQLQEKRRAIEEVSSCISNGLQQVEENRKSVTNEIKKSICNLIMEINRKGKILVNQLEG
LTKEHELGLKKQQDDVNSLSRHLDHVISFTQWATASHSGTALLYCKRLILYQIHYLMRAS
CNPSIVPQSSVRFQCRSGFWATNVDLGALTVERGPGRPPIPNHQAPPRAEAAAAAGALSL
SAQQRQSTLAQLQMQVDKLSQQSHRQPPPNHWSWYQNVRLPGPPGPPPPTRPVHGGSSPS
QGPLGLAQPGRRYGSSQPNTRSPTSSMLHNSGFTPAQSLRDLINSSSFPPKPGDVLQGTS
RYQQPLSAGAATQMSLHQRGMPEPSFLKRSEASATVPSISISIPKHSYVPSLASASTDKT
STLNHMAVQARQNSPMAKPSSSDRGTGTSSWKQSSEPTSAPSAKRRRRTSPGPIIIIKDE
PEDEDEVHFVQSSVGSSLPDSSTGAQSMPRLQQKVSVPNLVPGSESNTGKEQCPQPVAQP
ESVKRAEPEEDPNEDWCAVCQNGGELLCCDKCPKVFHLTCHIPSLNESPSGEWFCSFCRD
LVSPEMVYDSDRKDEVVSEEFSPVNRRSCERLLLRLFCNDFSTDFQQPASPSETKRYKEL
IKTPMDLSIVKRRLESKSQDGEYYMCLEGFVADVRLIFFNCAKYYKVTSEVGSAGVYLED
YFEEQLKLAYPDKIFPGGREDQMIPPLEDEIDEDEEMMADNVAPMEDDKPQSPAGPGIPP
VEEDFAPLEEAPAAEEEEKLETGEKATNTSKKETEETETKEKETEEKETEDKETEDKETE
DKETEDKETEDKETEDKETEEKATEEKVATAEDTTSPTDPEKDEKSPVKEVKSPLAADSD
SKEGVAPCSPDEENPDPPAEETVDAAETQEEEAADTAKEESA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaagggtcgacaacgacgacattgtcatcatcgtggagaacgaggcggagagt
ctgccagcccaggaggagaggctcaagcagccgggcaccatcgggctcatggacacttgt
cccagctgcaagttgagcttccacaacagggagcccaagctgctgccgtgcctccactcc
ttctgcaagaggtgtctgccgccccccttcaggagcgccgatcccaggcgggactctcag
ggtcaggtcgacaacaacaaaccactgggggccctccgctgtccggtatgcagacaggaa
tgctgggagatggacgtgctggataatttctttgtcaaggactctgctgagatgccgagc
agcaccatggagaaaagcagccaggtgtgtatgagctgcgatgacaacacagaagcaaca
ggttactgtgtggagtgtgtggagtttctgtgcctgacgtgcattgaggcgcaccagcgg
gtcaagttcaccagggatcacaccatacgacagaaggaggagatgtctccagaagcagtt
ggcctttccacacagaaacccgtgttttgtgacgtccacaagcaggagcccctgaagctg
ttctgtgagacgtgtgaccgactcacctgtcgagactgtcagctgcttaagcacaaggat
cacaactaccagtttttggaggatgcttacagaaaccacaagcagtacctggagaacatg
acgcagcagttacaagagaaacgaagagccattgaagaagtgtccagctgtatcagcaac
ggacttcaacaagttgaagaaaaccgtaagtctgtaacaaatgaaataaagaagtccatc
tgtaacctgatcatggagatcaacaggaaggggaagattctggttaaccagcttgagggt
ctgactaaagaacacgagctgggtttgaaaaagcaacaagacgacgtcaactcgctgagt
cggcacctcgatcatgtaataagctttacacaatgggccacagccagccacagtggaaca
gctctgctgtactgcaagagactgatcctttaccagatccattacctgatgagagcaagc
tgtaatccctccatcgtccctcagagttcagttcgcttccagtgtcgctctggtttctgg
gccactaacgtggaccttggtgctctgacggtagaaaggggcccgggacgaccgcccatc
cccaaccaccaagcacctcccagagcagaggcggccgcggctgctggagctctgtcgctc
tctgctcagcagcgtcagagcacgctggcccagctccagatgcaggttgacaagctttcc
caacagtcccacagacagccccctcccaaccactggtcctggtaccagaacgtccggctc
ccgggaccccctggccctccgccgccgaccaggcccgtccacggaggatcctccccctcc
cagggacccctaggtttggcacaaccgggacgcaggtatgggagttcccagccaaacacg
agaagtcccacctcctccatgcttcacaactcgggattcacacctgctcagtctctgaga
gatctgatcaatagctccagcttccctcctaaacccggggatgtgttgcagggtacttct
cgctaccaacagcctctgtctgccggagcagcgacacagatgtccctacatcagaggggc
atgcctgagccctccttcctgaagaggagtgaagccagcgcaacggtcccctccatctcc
atctccatccccaaacacagctacgttccaagtctcgcctcagcatcaacagataaaaca
agcacacttaaccacatggcagttcaagcaaggcagaactccccgatggccaaaccttcg
tcttcagaccgaggcacagggacgtcttcctggaagcagagttctgagccgacgtctgcc
ccctcagccaagcgacgaagaaggacgtccccagggcccattatcatcatcaaagatgaa
ccagaggacgaggatgaagttcattttgtgcagtccagcgttgggtccagcctgcccgac
agcagcaccggggctcagtcaatgccccggctgcagcagaaggtgtctgtcccaaacctg
gtccccggatcagagtccaacactgggaaagagcagtgtcctcagcccgttgctcagcca
gagtctgtgaagagagcggagccggaggaagatcccaacgaggactggtgtgccgtgtgt
cagaacggaggagagctgctgtgttgcgacaagtgtcccaaagttttccacctgacctgc
cacatcccttcgctgaacgagtcccccagtggcgagtggttctgttcattctgccgagac
ctggtctcacctgagatggtgtacgactccgacagaaaggacgaggtcgtctctgaggaa
ttctcaccggtcaatagaaggagctgtgagaggttgctcctgcgtctgttctgcaacgac
ttcagcactgacttccagcagcctgcttctccatcggagaccaagcggtacaaagagctg
atcaagacgccgatggatttgtcgatagtgaagaggagacttgagtctaagtcgcaggac
ggtgaatattacatgtgtcttgagggatttgtcgccgatgtcaggctcatatttttcaac
tgtgccaaatattacaaggtgacctcagaagtgggcagcgcaggcgtgtacttggaggac
tactttgaggagcagctgaagctcgcctacccagataagatctttcctggtggcagggaa
gatcagatgatccctcctttagaggacgagatcgacgaagatgaagaaatgatggcagac
aatgtggcgccaatggaagatgacaaaccacagagtcctgcaggaccaggaatcccccct
gtggaagaggatttcgctcctctggaagaggcgccggccgcggaagaggaggaaaagttg
gaaactggggagaaggcaaccaacacgagcaagaaggagacggaggagacagagacaaag
gagaaggaaacggaggagaaggagactgaggacaaggagactgaggacaaggagactgag
gacaaggagactgaggacaaggagactgaggacaaggagactgaggacaaggagactgag
gagaaggcgacagaggagaaggttgccaccgctgaggacaccacttctcctacagatcca
gagaaggatgagaagtctcccgtgaaggaggtgaaaagccctctcgccgctgatagtgac
tcaaaagaaggggtcgccccctgctccccagatgaagagaaccctgacccccctgcagag
gagactgtagatgcggccgaaacccaggaggaggaggcggcagacacagccaaagaggag
tcagcgtag
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