Pleuronectes platessa (European plaice): 128428572
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Entry
128428572 CDS
T09923
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pplt03009
]
128428572 (utp20)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128428572 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Nop14
EOS1
HOOK_N_NuMA
Motif
Other DBs
NCBI-GeneID:
128428572
NCBI-ProteinID:
XP_053270755
LinkDB
All DBs
Position
22:complement(7700799..7722382)
Genome browser
AA seq
2859 aa
AA seq
DB search
MKMKIKSKSSYHKSENTFRFLTFAERLANVNINVVHRIDRTGAYAEEVETYFSEGLTKWR
DLDLTEHFTTFSKEVSNNSQSFNMLVFHQKTIVESLKTHLAVKNSLAYQPLLDLVVQLAR
DLQTDFYPHFPDFFVLITSLLETKDTEVLEWAFTCISYLYKYLWRVMVKDMTNIYSLYST
LLSHKKEHIRKFAAESFSFLMRKVPDLDALLNHVFSDLQEHPDKAEGAGQLLFEMCKGVR
HMFHSAAANAFPVALRKLGPTTSPGVSLPWDTIRDALDYMAQVAAEHVEREHFLVLWESL
QVSVVEVLGFVEAGGEEADQASDQLERLLFIFQTLVSHRDGAKVTKPEAVCQTVLRLIQS
SALSVPCSRLLLQIISSLLLGENISLPRSLIQETIQKVFDSTLGEDLILEFSKEMFTMKQ
FEQLFLPCLLRFTAGMFSSGDALSRHCGLEVLVSLILAKAPPPTDGSMAFETYPLLFTGQ
STSSKEEGQESSTAPEQPTVPELVLSLIKFPEEQNQTIDDLSLPWSALMLLPHIRPLSPA
NVIPAVSALLNHLLCQIDTEKMGKAGLFVARQALSCLLSLDGSAQLLSLVTVDKVTSIFR
RFPSDLSALLLGDLYYTRLSLSGVSEHLSHNALLEVFHILHANLSSNISKIRLLTLRILS
QFEAELPPPPEGEETVDVQPVFAVCLQAELVPASVQDYRDKLLHLRKLRHDLVQRSLPQG
PAGSFQQVPLRYLIAMLFVNFRPLWEAVIELLVTHARGMDNKEFWVVYHEHLEMVAGMAE
KELRDEDEDEDEDDVSDEEQETSSQSEPGCDVIESGDVGVLFLEQLKLTSNPNDRTDFPN
FRSLLWRAMTQFPERVQSRSRELSPLLLRFIRNEFYPADLMIAPTQDVRKRNDAAQEDAE
MAVDEEEDEEEGVEGKGPKQKKGRPRRAASKQLIVHLRVFAKFTNPRSLYLEASLSELYN
QLLCHQDQQIQGVALECVLTYKDPNIVPYKENLERLLQDKHFKEEIVHFNISEETGVVEA
SHRVKLIPLLMRILYGRLRSKAGSKFQGKSSTASRSSIILRFLAGCQAEELGIFVDLLLE
PVCHYSQGSCLEAVERAVAQTDMSAILPLGRQHSLLNIINVVIQKLGHLINIYLPKVLQI
LLCVTASVSDVLDKRDQLRAGCISPLKNLRRLGVLRVLDFFDVFDSYSYSPEELDAVFQA
VVWPQVCRLPTESIHAPTPLLKLIHVWCKNARYFPLLAKHRPEHPECDVLMNVFALLSAK
NASQPIITIVLDIVESLATTKDFVASEMETETEMETVLSVNNSVFSQPAEGALIAADSLT
QGSRLLLPHISTLLRYLTAVVRNSDRLKKKKFRVQVAKELNILSKVSRFVSEKEQSSVLI
SLLLMYLQKGHNPQETEIDVLATVQNLLRQCVQPAVFLSPLSKLFSVIHNKLPRQALTSV
FQTLSDLEPSLKYITDLAAKLNAFDSRHLDEIHFDLRLTAFQDATGRVKDMETLDLDYIN
TIIYNCFHTYEIGDMSLADNATMCLSTIISQLAAVGPGEQIYRDVVQHTILDAVHKGLRS
KTESVQHDYTNVLACLVKTFPSKKEFRDLVQLTDYNDLESDFFEHMKHIQIHRRGRALRK
LAKQLTEGTVVMTSRSLQNYIMPYAMTALLDEKLAKLDNMTSASVEVVGAVCRRLTWSKY
LYYLKHFVHILQTSQVEQKLAVNLLVTVLEAFHFDHQTFLREMELAKAREAVSVSAEAEE
VDEAAEDESDASDDEKEMETDSKTAPGDVPMEVDNVEESNVVSKEAAPAKAKAPAAAPPV
AVTSGLPQSRDELETLISAIHKTVNDSVLPRLHRCLTAKVKRDDEHKAVRSKDVKEEEVS
RIPIAFAMVKLMQTLPPHIMEANLPGILIKVCVHLRNRFQEVRDVARSTLVKIVETLGFR
YLHYLLKEMQSVLVKGYQVHVLTFTVHRLLSSLSPTLKSGDLDPCMNMLIDIFNNELFGA
VAEEKEVKGIVSKLMEARHSKSMDSYEFLAKFSSKDSITKLMLPLKEILENSSSLKVCNR
VGAVLRRLILGLLVNGGMTPQDILLLSHGLISQSLPLLTMRDRAKASAKPPPDPRLPPPS
CLLLAPTPKRGGQKASISSRTNMHILVDAGLKLLHLSLRKSIVTSAEASTLEMLDPFVLL
LLECIDSMHIKVITEALTGLSWLLKFPLPAVGQNAEQLTKQLFVLLKDYSKAGAGRGENY
LLVQSCFKAITILVKSVKSNSISETQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLV
VPEMEEVLTKVAKLSVNGSNAMIRIHCRQIYLKYLLDYPLGRKLRHHMSFVVAQLQYEHD
VGRESVLEMLAYIFQTFPEKLLSKYSGLFFAPLALVMVNDDSARCKKMAAMAIKTLLTKL
ELNHKNTLYSLVTTWMKAEKASLRRLGTQICGLFVEVEGEEFARRLDDLLLLLEKEIDPD
NYEDIEEEQDEKGADRLLFSYLTLLTKLCKHCGLLELRKPHDTLLHIWGHIEAHLRYPHC
WVWLTASQLYGQMFASQQAEQLVAVWRGEGNDAASMSSTTAFITSNLDKKMRELALSFSL
QLQSKFLDTASGEQVVKNLLFVGKVIYLISPESDVAPAEVEVKEMEEEPPRENGDAVEGE
GKEENKKEEEEEEEKEEEKEKEEEEEEEKEEEKEEEEDEDDEDDDKDDRPPSLLWLMKKL
CLMAKREAAHTPKVHVKRTSVFKFLGAMAMDLGEDRLGPYLTTIISPLYRELDSTYAEQD
PTLKNLAQELIELMKRKVGLGKFSLAFSAVQKEFTQRRVARKRHRAMQAVANPDIAAKKK
IKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALRDLAILQ
NT seq
8580 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgaagatcaaatccaagtcttcgtatcacaagtcagagaacacgttcaggttt
ctcacctttgctgaacgacttgccaatgtcaacatcaatgtcgtccatcgcatcgacaga
actggagcttatgctgaggaagtagaaacatacttttcggaaggactgacaaaatggaga
gacctcgacttgaccgagcacttcacaacattctccaaagaggtgtccaacaacagccag
tcgttcaacatgctggttttccaccagaagacgatcgtggagagtctgaaaacacacctg
gctgtgaagaacagcctggcctaccagcccctgctggacctggtggttcagctggccaga
gacctgcagactgacttctatcctcacttccccgacttcttcgttctcatcacgtccctg
ctggagaccaaggacacggaggtcctggagtgggccttcacctgcatctcctacctctac
aagtacctgtggagggtcatggtgaaggacatgaccaacatctacagtctgtacagcaca
ctactgtcacacaagaaggaacatatccgcaagtttgccgcagagagcttctcttttttg
atgagaaaagttccagatctggacgccctgctcaaccatgtgttctcagacctgcaggag
caccctgacaaggccgagggagcaggtcagctgctgtttgagatgtgcaaaggagtcaga
cacatgttccactctgccgctgctaatgctttccctgtggccctgcggaagctcggcccc
acaacaagcccgggagtctctctgccctgggacaccatcagggacgctctggattacatg
gcccaggttgcagccgagcacgtcgaaagagaacacttcctggttttatgggagtcctta
caggtcagtgtggtggaggtccttggttttgtggaggcggggggagaagaggcagaccag
gcgtccgatcagctggagaggctgctgttcattttccaaaccctggtgtcccacagagac
ggagccaaggtcaccaagccagaagctgtgtgccagacggtgctgcggttgattcagagc
tcggctctgtcggttccctgttcccgcctcctcctccagatcatctcgtccctgctcctc
ggggagaacatcagtctgcccaggtccctcatccaggagaccattcaaaaggtgtttgac
agcacactgggagaagacctgattctggagttcagcaaggagatgttcaccatgaaacag
tttgagcagctcttcctcccttgcctgctgcgcttcactgctgggatgttcagtagtgga
gacgccctgtctcgccactgtggcctggaggtgctggtcagcctgatcctggctaaagcc
ccgcccccgacagacggctccatggcctttgaaacgtacccactgctcttcaccggacag
agcacaagcagtaaggaggagggtcaggagagcagtacagccccggagcagccgactgtg
ccggagctggtgctgtccctcattaaattccctgaggagcagaaccagaccatcgatgac
ctgtctctgccttggtccgccctgatgctgctgccacacatcagaccactgtctccagct
aatgttattcctgctgtgagcgctctcttaaaccacctcctgtgtcagattgacacagag
aaaatgggaaaagccggtcttttcgtagccagacaggccctgagctgcctcctcagtctg
gacggctctgcccagctcctctctctggtgactgtggacaaggtcacctcaatcttcagg
aggtttccctctgacctgtccgccctgctgctgggagacctctactatacccgcctgtca
ctcagcggcgtttcagagcatctatcccacaatgcactgctggaggtcttccatattctg
cacgccaacctctcctccaacatctctaagatccgtcttctgactctgaggatcctctct
cagtttgaggcggagctccctccaccgcctgagggtgaggagaccgtggacgtgcagccg
gtgtttgcagtttgcctgcaggcagaactggtgccggcgtcagtgcaggactacagagac
aagctgcttcacctccggaagctgagacacgacctggtgcagcgcagcctgccacagggg
ccggcaggatccttccagcaggtgcctctgcgttatctcatcgcaatgctgttcgtcaac
ttcaggcccctgtgggaagcagtcattgaacttcttgtgacccatgccagagggatggac
aacaaggagttctgggtggtctatcatgaacatctggagatggtggcagggatggccgaa
aaggaactgcgggatgaagatgaagatgaagatgaagatgacgtcagtgatgaggagcaa
gagaccagttctcagagtgagccgggctgcgacgtgattgaaagtggggacgtgggggtg
ctgttccttgagcagctgaagttgaccagtaaccccaacgaccggacggacttccccaac
ttccgcagcctgctgtggcgcgccatgacccagtttcctgagagagtgcagtcacgcagc
cgagagctgagtcctctgctgctcaggttcatcaggaatgagttttatcccgccgacctg
atgatagcccccactcaggacgtgaggaaaaggaatgatgctgcccaagaagatgctgag
atggctgtggatgaagaggaggacgaagaagagggtgttgagggaaaaggcccaaagcag
aagaagggacgtccacggagagctgcttccaaacagctgattgtccatttgagagttttt
gccaaattcaccaaccctcgctctctctacctggaggccagtctcagtgagctctataac
cagttgctctgccatcaggaccagcagattcagggagttgccctggaatgtgttctcaca
tacaaagacccaaacattgtaccatacaaagagaatcttgagaggcttctgcaggacaaa
cacttcaaggaggagattgtccatttcaacatttctgaggagacaggagtggttgaggct
tcacacagagtcaaactgatccctctgctcatgaggatcctgtacgggcgtctgcgcagc
aaagcgggcagcaagttccaggggaaatcctccaccgcctcccgctcctccatcatcctg
cgcttcctggccggctgccaggccgaggagctgggaatcttcgtcgacctgctgctggag
cccgtctgccattacagccaaggttcctgcctggaagcggtggagagggccgttgctcag
acagacatgagcgccatcctgccgctgggccgtcagcacagcctcctgaacatcatcaac
gtggtgatccagaagctgggccacctcatcaacatctacctgcccaaagtgctgcagatc
ctgctgtgcgtcaccgcctccgtgtccgacgtcctggacaaaagggaccagctgagagca
ggttgcatcagtcctctgaagaacctgaggcgcctcggcgtcctgagggtcctggacttt
tttgacgtctttgactcctacagctacagcccagaagagctggatgctgtcttccaggct
gtggtctggcctcaggtgtgtcgtctgcccacagagagcatccacgctccgacccctctg
ctgaaactcatccacgtgtggtgcaaaaatgccaggtacttcccccttctggccaagcac
agaccagagcatccagagtgtgacgtcctcatgaacgtctttgccctcctctctgccaag
aacgcctcccaaccgatcatcaccatcgtcttggacatagttgagtctctagcaacaacc
aaggactttgttgcctcagagatggagacggagacggagatggagacggtgctgagcgtg
aacaacagtgtgttctcgcagcctgcagagggcgctctcatcgctgcagattcattaact
cagggctccaggctgctgctgccccacatctccaccctgctgcggtacctcaccgccgtc
gtacgcaacagcgaccggctcaagaagaagaagttcagagtgcaggttgccaaggagctc
aacatcctctccaaggtcagtcggtttgtgagcgagaaggagcagagctcggtgctcatc
agcctgctgctgatgtacctgcagaaaggacacaaccctcaagagacagaaatcgacgtc
ctggccacggtacagaacctgctgagacagtgtgtgcagccggctgtcttcttgagcccg
ctcagcaaactcttctccgtcatccacaacaagctgccccggcaggccctcaccagcgtc
ttccagactctgtcagatctggaaccttccctcaaatatatcactgatttagcagcaaag
ctcaatgcgtttgacagtcgacacttggacgagatccactttgacctgcgtctcacggcg
ttccaagacgccaccggtcgcgtcaaagacatggagactctggacctggactacatcaac
accatcatttacaactgtttccacacctacgagatcggggacatgtcgttggcagacaac
gccaccatgtgtctgtccacgatcatctcccagctggcagcagtcggacctggagagcag
atctacagggacgtcgtacaacacaccatcctggacgcggtgcacaaggggctccgcagc
aagacagagagtgtgcagcatgactacaccaacgtgctcgcctgcctggtgaagaccttc
ccctccaaaaaggagttcagagacctggtgcagctcactgactacaacgacctggagtcc
gacttctttgagcacatgaagcacatccagatccaccgtcggggccgagcgctgaggaag
ttggccaagcagctgaccgaaggcacggtggtgatgacctctcgctccctgcagaattac
atcatgccgtacgccatgaccgccctgctcgatgaaaagctggccaagcttgacaacatg
acgtcagcatcggtggaggtggtgggcgccgtgtgtcgccgactgacctggtccaagtac
ctgtactacctgaagcactttgtccacatcctgcagacctcgcaggttgagcagaaactg
gctgtaaatttgctggtcacagttctggaggcttttcatttcgaccaccagaccttcctc
agagaaatggagctagcgaaggccagagaagctgtgagcgtctcagccgaggcagaggag
gtggatgaagctgcagaggacgagtctgatgcaagtgatgacgagaaggaaatggagacg
gacagtaagacggctccgggtgacgttcccatggaagtggacaacgttgaagaaagcaat
gtcgtctcaaaggaagctgcccccgctaaggccaaggcaccagcggctgcgccacctgtg
gcagtgaccagcgggctgccacagagcagggacgagctggagactctgatcagcgccatc
cacaagactgtgaacgacagcgtgctgcctcgtctgcacaggtgtctcaccgccaaggtg
aagcgggacgacgagcacaaggcggtgaggtcaaaggacgtgaaggaggaggaggtgtcg
aggatcccgatagccttcgccatggtcaaactgatgcagacgctgcctccgcacatcatg
gaggccaatctgcccggtatcctgatcaaggtgtgtgtgcacctgaggaaccgtttccag
gaggtccgtgacgtggcaagatcaacgctggtgaagattgtggagacgctcgggttcaga
tacctgcactacctgctcaaagagatgcagagcgtcctggtgaagggttaccaggtccat
gttctcacattcaccgtgcaccggctgctgtcttccctcagtccaaccctaaagagcggc
gacctggacccgtgcatgaacatgctcatcgatatcttcaacaacgagctgttcggggcc
gtggccgaggagaaggaggtgaaggggatcgtgtccaagctgatggaggctcgacacagc
aagagcatggactcctacgagtttctggccaagttctccagcaaggacagcatcaccaag
ctcatgctgccactgaaggagattctggagaattcctccagtctgaaggtgtgtaaccgg
gtgggtgcggtgctgcggcgtctcatcctgggtctgctcgtcaacgggggcatgacccct
caggacatcttactgctgagccacggcctgatcagccagagcctgccgctgctcaccatg
agagaccgagcgaaagcgtcggctaagcctccccccgaccccagactgcccccccccagc
tgcctgctcctggctccgaccccgaagagaggaggtcagaaagcttccatcagcagtcgg
accaacatgcacatcctggtggacgccggcctcaagctgctccacctgagtctgaggaaa
tccatcgtgacgtcggccgaggcctcgactctagagatgctcgaccccttcgtgctgctg
ctgctcgagtgcatcgactccatgcacatcaaggtgatcacagaggctctgacgggcctc
agctggctgctgaagttccctctgccggcagtggggcagaacgccgagcagctgaccaag
cagctctttgtcctgctgaaggattactccaaggccggagcgggccgcggggaaaactac
ctcctggtccagagctgcttcaaggcgatcaccatactcgtgaaaagtgtcaaaagcaac
agcatttctgagacgcaactgcaagtgctgctgggatacgctgaggaggacatctacgat
cagtcgcgccaggccaccgcctttggtctcctgaaggcgattctgtccaggaagctcgtg
gttccagagatggaggaggtgctgaccaaggtggccaagctatcagttaacggcagcaac
gctatgatcagaatccactgtcgacagatctatctgaagtacctgctggactacccactg
ggcaggaagctgaggcatcacatgtccttcgtggtggctcagctgcaatacgagcatgat
gtgggccgggagtcggtgctggagatgctggcatacatcttccagactttccctgagaaa
ttgctgtcaaaatacagcggcctgttcttcgcccccctcgccctggtcatggtcaacgac
gactcagcgcgctgtaagaaaatggcggccatggccatcaagactttgctaaccaagctg
gaactgaaccacaagaacaccttgtactccctcgtcaccacatggatgaaagcagaaaag
gcgagcctgcggcgtctcgggactcagatttgcggcctgtttgtggaggtggagggggag
gagtttgcccgtcgtctggacgacctgctgctgctgctggagaaagagatcgaccctgac
aactacgaagatatcgaagaggagcaggatgagaaaggagccgaccggctgttgttcagt
tatctgactctcctcaccaaactctgcaaacactgcggcctgctggagctgcgcaaacct
cacgacacgctccttcacatctggggtcacatcgaagcccatctgcggtaccctcactgc
tgggtgtggctgacggcctcacagctgtacggccagatgttcgcatcccagcaggcagaa
cagctggtcgccgtttggagaggagagggcaatgacgctgcctccatgtcgtcaaccaca
gccttcatcaccagcaacctggacaagaagatgagagagttggcgttgtcgttcagcctc
cagctgcagtccaagttcctggacacagcgtcaggagagcaggtggtcaagaacctgctg
ttcgtcggcaaggtgatctacctcatttcccccgagtccgacgtcgcgcccgctgaggta
gaagtgaaagagatggaggaggagccgccgagggagaatggagatgcagtggagggagaa
ggaaaggaggagaacaaaaaggaagaggaggaggaggaagaaaaggaagaggagaaagaa
aaggaggaagaagaggaggaggagaaggaagaagagaaggaggaggaggaggatgaagac
gacgaagatgacgacaaggacgatcgacctccgtctctgctgtggttgatgaagaagctg
tgtctgatggccaagagagaggcagctcacactcccaaagtccacgtgaagagaacgagt
gtgtttaagttcctgggagctatggccatggacctgggggaggaccgactgggcccctac
ctgaccaccatcatcagtcctctgtacagagagctggacagcacctacgcagaacaagat
cccacgctgaagaacctggcacaggagctgatcgagctgatgaagaggaaagtggggctg
gggaagttctcgctggcgttctccgccgtgcagaaggagttcacacagaggagagtggcc
cggaaacgacacagagccatgcaggccgttgccaacccagacatcgccgccaagaagaaa
atcaagaagcacaagaacaaaatcgaagccaagaagaggaagatcgagtttctacgacca
ggatacaaagccaagaagcaccggagccacgcgctccgagacctggccattttgcagtga
DBGET
integrated database retrieval system
