Pleuronectes platessa (European plaice): 128428722
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Entry
128428722 CDS
T09923
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128428722 (sox5)
Transcription factors [BR:
pplt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128428722 (sox5)
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128428722
NCBI-ProteinID:
XP_053270926
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All DBs
Position
22:7938616..8024621
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AA seq
788 aa
AA seq
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MLLLSRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGDITMATSRQRMEDDESEGL
GGVIHLPLVSYCSKVSPRSPANRSLDSPTNMDQDGTKRSSLSPFPQHNSTSPGKEEGGGG
GRACSDGGSSAGALGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKD
KLLAMGSGHIGEIKGTPDSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQR
QQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAA
AQQGFLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAAAAATPGLGSLQLQQFYAAQLAAMQ
VSSGAKQHGGSMQSQAHLGRHSPPSNTHSHSDKGRSSPQQNKTKDSEGAQPLNLSAKPKA
SESKSPNSPPTSPQVPGAAAAKLGHAGSMKHSIAPSSIGGPPTRVSSIDLLSSLSSTAYL
SDHEAVSKAFAEARQMKEHLKREQQVLDAKVAAVTNLSLNNGRTDKDKAALESLSQQLKQ
QAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFREARGRGTSEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRIGEYKAIMRSRRQEMRQYFSVGQQGQLPLSSAGVVYPGALSMAGMPSPQMP
SEHSSMSSSPEPNANHHQNPHMPSLKGGEPRIKQELRLDDSNGDAYDDFEYEDEEVDYTS
DNENHITQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgtcgagagagacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagacataaccatggcaaccagcagacagcgaatggaggatgatgagagcgagggactg
ggcggtgtcatccacctccccctggtctcctactgcagcaaagtgtcccctcgttcgccc
gccaaccgcagcttggacagccccaccaacatggaccaggacggcactaagaggagctct
ctgagtcctttcccccagcacaattctacctcaccgggcaaagaagaaggcggagggggt
ggacgggcctgcagcgacgggggctcctccgcgggcgccctgggaaccccagagagacgc
aagggcagcctggcagacgtggtggacacactgaaacaacgcaagatggaggagctgatc
aagaacgagccagaagaggcccccagcattgagaggctgttgtcgaaggactggaaggat
aaacttttggccatgggctcagggcacattggagaaattaaaggtactccagacagcctg
gcggagaaagagcgccagctcatgggcatgattggtcagctgagcagcctgagggagcag
ctcctggcggcccatgaagagcagaagaagctggccgcctcgcagatggagaagcagagg
caacagatggagcttgccaagcagcaacaggaccagattgcccggcaacagcagcagctt
ctgcagcagcaacacaaaatcaacctcctgcagcagcaaatccagcaggtccagggccag
ctccctccgctgatgattcccgtctttcccccggaccagaggacactggcggctgccgca
gcccagcaaggcttcctcatgccccctggcttcaactacaagcctggctgcagtgacccc
taccctcttcagctcatccccacaacgatggctgctgccgctgctgctgctgctgccaca
cctggccttggatccctacagctccagcagttttatgccgctcagctggcggcaatgcag
gtctcctcaggggccaagcagcacggaggcagcatgcagtcccaagctcacctgggcaga
cactccccacccagcaacacacactcccacagtgacaaagggcgcagctccccacaacaa
aacaagaccaaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggca
tccgagagcaagtcacccaactcccccccaacttccccacaggtccctggtgccgctgct
gccaagctgggccacgccggttccatgaagcacagcatcgccccctccagcattggagga
ccaccgaccagagtcagctccatagacttgttgtcatcgctgtcttcaacagcctacctg
agcgaccacgaggcggtgagcaaggccttcgccgaggcccggcagatgaaggagcacctg
aagcgggagcagcaggtcctggacgcaaaggtggcggccgtcaccaaccttagcctcaac
aacggacgcacggacaaggacaaggccgccttggagagtctgagtcaacagctgaagcag
caggcggaggacaagttcagccacgccatgctggacttcaccatgagcggagactctgac
ggctcccccagcgtgtcggactccaggatattccgggaggcacggggtcgcggcactagc
gagcctcacatcaaacggccaatgaacgccttcatggtctgggccaaggacgagcggagg
aagattctgcaggccttccctgacatgcacaactccaacatcagcaagatcctcggctcg
cgctggaaagccatgaccaacctggagaagcagccgtactacgaggagcaggctcgcctc
agcaagcagcatctggaaaagtacccagactacaagtacaagccgaggcccaaacgcacc
tgcctggtggacggcaagaagctgcgtattggcgagtacaaggccatcatgaggtcccgc
agacaggaaatgagacaatatttcagtgtggggcagcagggccagctgcccttgtcctca
gcgggcgtggtttacccaggtgccctgtcaatggcggggatgccctcaccccagatgccc
tctgagcactcaagcatgtccagcagccccgaacccaacgccaaccaccaccagaacccc
cacatgcccagcttgaaggggggggagccacgcatcaagcaggagctgcggctggacgac
agcaacggcgacgcgtacgacgactttgaatacgaggacgaagaggtcgactacaccagc
gataacgagaaccatatcacccaatag
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