Pleuronectes platessa (European plaice): 128428820
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Entry
128428820 CDS
T09923
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128428820 (pdzrn4)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128428820 (pdzrn4)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
128428820 (pdzrn4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
GRASP55_65
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
128428820
NCBI-ProteinID:
XP_053271048
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Position
22:10939091..10971720
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AA seq
818 aa
AA seq
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MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKVDHDQAVAEAIRRDPIVVQVLRRTPNTAA
GASPHNHNGMPQDLCVVDVCTQTDITFEHIMALAKLRPATPPVPDICPFLLSDSCHSIHT
MEHEYYECPEYLSNTPAGVERMEEYEYEEVELCRQNNQEKLGLTLCYRTDEEEDTSIYVS
QVEPNSIAARDGRIKEGDRILQINGCEVQDREKAVAMLSNEEARSIVLLVTRPEIQLEEE
VWLDDEQQELVEELKMEILEERRKQKQHSFDRGDEHQAEEEMTTDTATYSSNNQDSGFGR
STDSPEHQPMLARLHRKSPAHCLRDRWQAEHQHTRHGSGQDTQGQRIMSKRQGQEGVLSI
RNSGGGVLGLENRFQQLLELKCQIRNGGECGVYSIRHSIECSVTEQGVEEADGGDSEGGG
GGVEHELRMLNDELRSLELECQNIMQAHQLRQTHKLDPSQPAPCSPGWSPKDTHKRHGRL
ADIHEHPERSDSDKLREKDSSSAYNTAESARSTPLGMERSPDHSLQRHISITNQKNLRLA
SSTSSSPIPIPKPHSTPSHSRPADQGLVISSSPDQSNPSRSESDPAMPADDERCEKKGRT
RESRRGLPYGCSYQTTPYQGQGGSRQLQSYMHLLQQHSSLEYSQSQLSLVSVCRDNVHRS
GRPGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDDDAMSEMKMG
RYWSKEERKQHLARAREQRKRREFMQKSRLECLKEGPASGTEGRKEINILELSHKKMMKK
RNKKILDNWMTIQELMSHGARVPEGSKVHNAFLSVTTV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcaccttgcagaaacgggaggaacactacaaactgctgtacgag
attgcacaggtaaacgggcgtgacttctccaaggtcgaccatgaccaggcggtggcggag
gccatcaggcgagaccccatcgttgtccaggttctccggcgaacccctaacacagctgcg
ggggcgtccccacacaaccacaacggcatgccacaggacctgtgtgtcgtcgacgtttgc
acacagacggacatcaccttcgagcacatcatggcactggccaagctccggcctgcgacc
ccacccgtccctgacatctgtcccttccttttgtctgacagctgtcattccatccacacc
atggagcacgagtattatgaatgtccagagtacctgtccaacacgcctgcaggggtggag
aggatggaggagtatgaatacgaggaggtggagctgtgtcggcagaacaaccaggagaag
ctcggcctgacgctctgctacaggaccgacgaggaggaggacaccagcatctatgtcagc
caggtggagccaaacagcatagcagcgagagacgggcgcatcaaggaaggagatcgtatt
ttacagataaacggctgtgaggtgcaagacagagagaaagccgtggccatgttatcaaac
gaagaagcaagaagcatcgtgttgctggtgacgagaccagaaatccagctggaggaggag
gtatggctggatgatgagcagcaggagctggtggaggagctgaagatggagatcctggag
gagaggaggaagcagaagcagcatagttttgacagaggggatgagcaccaagctgaagaa
gagatgacaacagacacagctacgtattcctccaataatcaagacagcggcttcggacgc
agtacagacagtccagagcaccaacccatgcttgccagactacacaggaagagcccggcc
cattgcctgagggaccgatggcaggcagagcatcagcacacaagacatgggagtggacag
gacacccagggtcaaaggatcatgtccaaacgtcaaggccaagaaggggtactcagtatt
cgcaatagtggaggtggggttttaggattagagaatcgattccagcaacttctggagctc
aagtgtcaaatccggaatggaggcgagtgtggggtgtactctattcgacacagcatagag
tgtagcgtcactgaacagggagtagaggaagcagacggtggggacagtgagggaggcggg
ggaggtgtggagcacgagttgaggatgctgaatgacgaactacgtagtcttgagctggag
tgccagaacatcatgcaggcgcatcaactccgtcagacacacaagctggacccctcacag
ccggcaccctgctcaccgggatggagccccaaagacacacacaagcggcacggcaggctg
gccgacatccatgaacatccggagaggtcggacagcgacaagctaagggagaaggacagc
tccagtgcctacaacacagctgagagtgcacggtcgacaccgctaggtatggagaggtct
cctgatcactcgctacagagacacatcagcatcaccaaccagaaaaacctcagactagcc
tcctccacatcctcaagccccatccctatcccaaaaccccacagcaccccgagtcatagc
agaccggcagaccaaggcctggtaatatccagcagcccagaccagagcaacccctccagg
tctgagtccgaccctgccatgcctgcagatgatgagaggtgtgagaagaaagggaggacc
agagagtcgaggagagggcttccctatgggtgttcataccaaacaaccccctatcaaggc
caaggaggatccaggcaacttcagagctacatgcatctgctccaacagcactcgtccctg
gagtactcccagagccagctgagcctggtcagcgtctgtagagataatgtgcaccggagt
ggacgccctggggagccccgtctggagtggaaggtcaaagtccgcgctgacggcacgcgc
tacgtggcccggaggcctgcccgcgaccgcatcctgagggagcgggcgctgaggatccga
gaggagaggagcggaggcatgaccacggacgatgatgccatgagcgagatgaagatgggc
cgctattggagcaaagaggagaggaagcagcacttggcgcgggccagggagcagaggaaa
aggagggagttcatgcaaaagagtcgcttggagtgtcttaaagaggggccggccagcgga
accgagggcaggaaggagatcaatatcttagagctcagtcacaaaaagatgatgaagaaa
cgaaacaagaagattctcgacaactggatgacgatccaggagttgatgagccacggggcc
cgagtccctgaaggctcgaaagtacacaacgccttcctgtctgtcacaactgtctaa
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