Pleuronectes platessa (European plaice): 128428953
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Entry
128428953 CDS
T09923
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04510
Focal adhesion
pplt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128428953
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128428953
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128428953
NCBI-ProteinID:
XP_053271196
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All DBs
Position
22:17649041..17668736
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AA seq
1780 aa
AA seq
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MSLSLLFITALVLLCPVRTQVPEFADVCTEGSCYPATGDLLIGRPHKLTASSTCGLKRPE
RFCIVGHLEEEKKCFMCDSSQTFHEETNSVSHAIENVVTTFAHNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMVIERSMDFGKSWQVYRYFAYDCEASFPGVSAGPM
VKVDDLICDSHYSDIEPSTEGEVIIRVLDPAFEIEDPYSVRIQNMLKITNLRVKFLRLHT
LGDNLLDSRVEVTEKYYYALYDLVVRGNCFCYGHASECAPMDGAPTRAEGMVHGRCVCNH
NTQGLNCERCTDFYNDLPWRPAEGRNTHACKKCQCNRHSTSCHFDLAVFMTTGNTSGGVC
DDCQHNTVGRQCEQCAPFFYQHPERDLRDPHVCEPCNCDPTGSLEGGLCDPRTDVAARLI
SGQCRCKGHVEGERCDHCRQGHYGLGQGPRGCLACACNPLGTLPGGNPCESHSGKCFCKR
LVDGHNCDQCLPQHWGLSNDMDGCRSCDCDQGGAVDNNCDPHSGQCVCREHMFGRRCDQV
ESGFYFITLDHYTYEAEDAKHGPGVTVVQRPYPLDRSPTWTGMGFVNVPEGAYLEFNIDN
VPDSMDYDVLIRYEPQLPEQWEQVNIRVQRPVFNPTNYISQCGNSIQAGDEQAISLPPGS
RHVLLVRPVCFERGMNYTISLSLPLYSSVSDVQSPYTLIDSLVLIPRVRELDMFHGVDGG
GAWDTFQRYRCLESSQSVVKSPMTDICSDYIFSVSALLHNGAMACQCDPQGSLSAVCESS
GGQCRCRPNVVGRNCEHCAPATFLFGPAGCRPCDCDPQGSVSAFCHEATGQCECFPGAAG
RQCSHCLPGFWGFPQCRPCNCNGHSEFCHLQTGECQGCRDFTSGHHCERCLDGYHGDPEL
GSGGHCRPCMCPDGPRSGRQFADKCYVLSYTNQLVCVCSPGYKGARCDECSPGYFGNPLV
PGGGCMPCQCNSNIDMHDPGSCDTRTGACLKCLYHTDGYGCKHCKLGYYGDAATQSCRKC
MCDSEGTLPLACSTPGECQCDQQTGQCPCQPRVVGQNCDRCAADTWNLASGGGCERCDCD
PAHSFGSSCNEVTGQCSCKPGFGGSTCRECRELFWGDPEVKCHACDCDPRGISSEQCHRS
TGQCTCVEGVSGPRCDECARGFQGEFPDCAPCHRCFATWDTVVGELTNQTQRLEAQVTEL
QTNGVSEPYKELIGSLERNSKAVREIVESNPAAVKLEQTQDLMHQITGLMSYLNGKLNTT
EETLNLLRNDSNSTDVRLEALTEEANQLELSVQDLRQQVYDAKNANLQGAMDTITAAHTQ
STMAELRANSSTSDPGNTVEESAAVRKATEDKLSSGQKEFDRKHQRNSGKLEKLSDELEK
LDLSPLSEKTCGGAADGAGCSGSSCGGLGCVGEDGAAQCGGEGCKGIVTTSQTALKSAKD
LDQEILAAMQEVDKLSRLVWEANLRANEARGNAMEVLIKSNRSKERVEQSNEQLRNLIKE
IRDLLTNEKADVSVIEMVANEVMALEMPTSTEKLHELTKEIREKVGSLTSVEDILSQSAE
DIKVAEKLLKEAKAASEEASTMKDTADVVKAALNETERAQSIAMEAIQLAQNNTKGTLDL
LISVESETASTELKLSNTTGRLVQLEREVGLLRQNNLEVNRLSETAERVGEQARQEADHA
QKEYDSEVKDKLVEVEDLVEDKGETVLQARRRADELQQEAQELLTQSSSQLQRLGELESS
YEENQRILEARAAELVELETMVRKVLEEISYKVTLYSTCL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcagcctcctcttcatcacagctctggtcctgctgtgtcccgtcaggactcag
gttccagagtttgcagatgtgtgcacggagggcagctgttacccggccaccggcgacctg
ctgatcggccggccgcacaaactcaccgcctcgtccacctgcggcctgaagaggccggag
cgcttctgcatcgtgggacatctggaggaggagaagaaatgtttcatgtgcgactccagc
cagacgttccacgaggaaaccaactccgtcagccacgccatcgagaacgtggtcaccacc
ttcgctcacaaccgcctcaaaacctggtggcagtcggagaacggtgtggagaacgtgacc
atccagctggacctggaggccgagtttcacttcacacatctcatcatgaccttcaagacc
ttccgcccggcggccatggtcatcgagcgctcgatggacttcgggaagtcgtggcaggtt
tatcgatacttcgcctacgactgtgaggcgtccttccccggggtgtcggccgggcccatg
gtcaaagtggacgacctcatatgtgactcccactactccgacatcgaaccctccacagag
ggagaggtgatcatccgggttctggacccggccttcgagatcgaggacccgtacagcgtg
aggattcagaacatgctgaagatcaccaacctccgggtgaagttcctcaggctccacacg
ctgggcgacaacctgctggactcccgggtggaggtgacggagaagtactactacgccctc
tacgacctggtggtgcgaggaaactgcttctgctacggccacgcctccgagtgcgccccg
atggacggagcgcccaccagagccgagggcatggtccacggccgctgtgtgtgtaaccac
aacactcagggattgaactgtgaacgctgcacagacttttacaacgatctgccgtggagg
cctgcggagggacgcaacacacacgcctgcaagaagtgccagtgtaaccgtcactcgacc
tcgtgtcacttcgacctcgccgtgttcatgacgaccggcaacacaagcggcggcgtgtgc
gacgactgtcaacacaacacggtcggccggcagtgcgagcagtgtgcgccgttcttctac
cagcacccggagagggacctgagggacccccacgtctgtgaaccgtgtaactgcgacccg
accggctctctggagggggggctgtgtgacccgcgcaccgacgtggccgcccggctgatc
tcaggccagtgtcggtgcaaaggtcacgtggagggcgagcgctgcgaccactgccggcag
ggccactacgggctgggccaggggcctcggggctgcctggcctgtgcctgtaacccgctg
ggcacgctgccgggaggaaacccctgtgagtcccactcaggaaagtgcttctgcaaacgc
ctggtggacggacacaactgtgaccagtgtctgcctcagcactggggtctgtccaacgac
atggacggctgcagatcatgtgactgtgaccagggcggagctgtggacaataactgtgac
cctcactcaggacagtgcgtgtgcagggagcacatgttcgggcgccgctgcgaccaggtg
gagtccggcttctacttcatcactctggaccactacacctacgaggccgaggacgccaag
cacggacccggggtgacggtggtccagagaccttaccccctggaccggagtcccacgtgg
acggggatgggattcgttaacgtgccggaaggagcctacttagagttcaacatcgacaac
gtcccagactccatggactacgatgtccttattcgctatgagcctcagctgccagagcag
tgggagcaggtgaacatcagagtccagcgtcccgtcttcaatcccacaaactacatcagt
caatgtgggaactccatccaggctggagacgagcaggccatctccctccctccaggatcc
agacacgtgttgctggtcaggccggtttgtttcgagagaggaatgaactacacgatcagc
ctgagtctgccgctgtactcgtcagtcagtgacgtccagagcccctacacactcatcgac
tctttggtgctgattcctcgggtcagggagctggacatgttccacggcgtggacggcggg
ggggcgtgggatacgttccagcgctaccgctgtctggagagcagccagagcgtcgtgaag
agccccatgaccgacatctgcagcgactacatcttcagcgtctctgctctgctgcacaac
ggagccatggcatgccagtgtgaccctcagggttcgctcagtgccgtgtgcgagtccagc
ggaggtcagtgtcgctgtcgacccaacgtggtcgggaggaactgtgagcactgcgccccg
gccaccttcctgttcggccccgccggctgcagaccttgcgactgcgacccccagggctcg
gtcagcgccttctgccacgaggccaccggccagtgcgagtgcttccccggggccgctggt
cgccagtgttcccactgcctgccgggcttctggggcttcccccagtgccgaccctgcaac
tgtaacggccacagcgagttctgccacctgcagaccggcgagtgccagggctgcagggac
ttcaccagcggacaccactgtgagaggtgcctggacgggtaccacggggaccccgagctg
ggctccgggggacactgccgtccctgcatgtgtcctgacggcccccgcagcggacgccag
tttgcagacaaatgttacgtcctgtcctacaccaaccagctggtgtgtgtgtgcagcccc
ggctacaaaggcgccagatgtgacgagtgctcccccggctacttcgggaaccccctggtg
cccggcggcggctgcatgccctgccagtgcaacagcaacatcgacatgcacgacccgggg
tcctgcgacacgcggacgggcgcctgcctcaagtgcctgtaccacaccgacggctacggc
tgcaagcactgcaaactgggttactacggggacgctgccacgcagagctgcaggaagtgc
atgtgcgacagcgaggggactctccctctggcctgttcgacccccggcgagtgtcagtgt
gatcaacagaccggtcagtgtccctgccagccccgcgtggtcggtcagaactgtgaccgc
tgtgccgcggacacgtggaacctcgccagcggggggggctgcgagcgctgcgactgtgac
cccgcccactccttcggctcctcctgcaacgaggtcacgggacagtgctcgtgcaaacct
ggttttggcggcagcacgtgtcgggagtgcagggagctgttctggggggatccagaggtc
aaatgtcacgcttgtgactgtgaccctcggggaatctccagcgagcagtgccaccgctcc
accggtcagtgcacctgcgtcgagggcgtctccggcccgcgctgcgacgagtgcgcccgc
ggcttccagggcgagttccccgactgtgcgccctgccaccggtgcttcgccacctgggac
accgtggtcggcgagctgaccaatcagacccagcgcctggaggcccaggtgacggagctg
cagaccaacggggtgtcggagccgtacaaagagctgatcggcagcctggagagaaactcc
aaggccgtgagggagatagtggagagcaaccctgcagccgtgaagctggagcagacccag
gatctcatgcaccagatcaccggtttgatgtcctacctgaacggaaagctcaacaccacg
gaggagaccttgaaccttctccgcaatgactccaactccaccgacgtaaggttggaggct
ctgacggaggaggccaaccagctggagctgagcgtccaggacctgaggcagcaggtgtac
gacgccaagaacgccaacctccagggtgccatggacaccatcacagcagctcacactcag
tccacgatggcggagctccgcgccaactcctccaccagcgaccctggaaacacggtggag
gagtccgccgcggtacggaaagccacagaggacaaactgagcagcggccagaaggagttc
gaccgcaagcaccagagaaactctgggaagctggagaaactgtccgacgagctggagaaa
ctcgacctgtcaccgcttagtgagaagacgtgtggcggtgcagctgacggtgccggctgc
tctggatcctcctgcggcgggttgggttgtgtcggcgaggacggagcagcccagtgcgga
ggagaaggatgcaaaggcatcgtcaccacctcccaaactgctctcaaatcagccaaggac
ctggaccaggagatcttagcagcgatgcaggaggtggacaagctctccaggctggtgtgg
gaagcgaacctccgggcaaacgaggccagagggaacgcgatggaggtgctgatcaaatcc
aaccggagcaaggagcgggtggagcagagcaacgagcagctccgcaacctcatcaaggag
atccgagacctcctcaccaatgagaaggccgatgtgtctgtgatcgagatggtggccaac
gaggtgatggctctggagatgccgacctcgaccgagaagctgcacgagctgacgaaggag
atcagggagaaggtcgggagcctgaccagcgtggaggacatcctgagtcagagcgctgag
gacatcaaggtcgcagagaagctgctgaaggaggccaaggctgccagtgaagaggcgtcc
accatgaaggacacagcagatgtagtgaaggcagcgctgaacgagacagagcgcgctcag
agcatcgccatggaggccatccagctggcccagaacaacaccaaaggaaccctggacctg
ctgatctctgtggagtcggagacggcctccacggagctgaagctcagtaacaccaccggg
cgcctggtccagctggagagggaggtcggcctgctgagacaaaacaacctggaggtgaac
cggctgtcggagacggctgaacgggtcggagagcaggcccgacaggaagcagaccacgcc
cagaaggagtacgactcggaggtgaaagataagctggtggaggtggaggacctggtggag
gacaaaggggagacggtgctgcaggcgaggaggcgagcagacgagctgcagcaggaggcc
caggagctgctcactcagagcagcagccagctgcagagactcggagagctggaaagttcc
tacgaggaaaaccagcgcatcctggaggccagggccgcggagctggtggagctggagacg
atggtccgcaaggtcctggaggagatcagctacaaagtgactctgtacagcacctgcctg
tga
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