Pleuronectes platessa (European plaice): 128429945
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Entry
128429945 CDS
T09923
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128429945
04121 Ubiquitin system [BR:
pplt04121
]
128429945
Transcription factors [BR:
pplt03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128429945
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128429945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
ZBED1_RNase-like
ZBED1_RNase-like_helical
FAM200-ZBED5_RNase-like
zf-BED
DUF8247
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
128429945
NCBI-ProteinID:
XP_053271818
LinkDB
All DBs
Position
23:3321054..3324017
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AA seq
624 aa
AA seq
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MELVSKPNATAAVWEHFGFKPNGRGEPNNLCEPTCRICLKTVLTKRGNTTNLHLHLKHNH
PMQFSQLGKKQTVGKSPSSQLSTITGAFSRQTKYKQDSAKWCALTDCVVRFIAREMMPFS
IVEKPAFRRMLQTFDSQYELPGRTYVSQTAIPQLYNSVKDSILKEIKDIPFYSATTDMWS
STNMTPYMSLTIHYITADWTLHSKCLETRYVPENHTADTLGENLKSALADWGLDEHKLVC
ITTDNGANIVAAIRNLGWSWLNCFGHNLHLAVCHGLDSDKDRTARAFGLCKSLVNTFNLS
WLKRRDLRKAQSEANLPQHSLILDVVTRWGTKQKMVERVLEQLPAIRSVLVQDRKHSHLN
PTWQDVSVLESINAAMKPLADFTDVLSGERYVTVSSVKPVMELIKDDLLSPGPDDTALTA
SIKQNMCRVLTEKYKSPAIQVLLRKATILDPRYRGSMEEAEALDDVKQQLVQELLDIIGP
EESGEGASGESCSNAAGGNVDEPTATAPTKKMKLSDFLRNRRAHLTSQTQASFPKRVQAD
TELTKFLQEDALDAACDPLMWWHDNQRKYPLMAKLAQKYMCICATSTSSERMFSTAGHIV
TPERSCLKPHKVNMLVFLARNLQD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggagttggtttctaagccgaacgcgacagctgccgtgtgggagcacttcggcttcaaa
cccaacggccggggcgaaccaaataacttatgcgagccgacatgtcgcatttgtttgaaa
acagtattgacaaaacgcggtaatacaacaaacctgcatcttcacctgaaacacaatcac
ccgatgcagttttcccagcttgggaaaaaacaaacagttgggaagtctccgtcttcccaa
ctgtccacaatcactggggcgtttagtcggcaaacaaagtacaaacaggacagcgcaaaa
tggtgcgcgctcactgactgtgtagttcgcttcattgctagagagatgatgccctttagt
atcgtggaaaagcctgcatttcgacgaatgctgcaaacatttgacagccagtacgaattg
cctgggagaacatacgtgtcacaaacggcaattccacaactgtacaacagtgtaaaagac
agcatactaaaggagatcaaagacatcccattttactctgccactacagatatgtggtca
agtacaaacatgactccctatatgagcttgaccatacactacataactgcggactggacc
ctgcactccaagtgtttagagaccagatatgtcccagagaatcatactgctgacaccctt
ggagaaaacctgaagtctgctttagcagactggggactggatgagcacaaactagtctgt
atcactacagataatggtgctaacattgttgctgcaataagaaatcttggctggtcatgg
ctcaattgctttggccacaacctccaccttgctgtgtgccatggtctggacagcgacaaa
gatcggacagcgcgtgcattcggactctgtaaaagtttggtcaacacattcaacctgagc
tggcttaagaggagagacctgaggaaggcacagagtgaggcaaatctcccccaacacagt
ctaatactggatgttgtcacacgatggggcactaagcagaagatggtagagagggtgctc
gagcaactcccagccataagaagtgtcctggttcaagaccgtaaacatagccacctcaat
ccaacctggcaagatgtttctgtgttggagtccatcaacgcagcaatgaaaccactagct
gacttcacagacgtcctctcaggggaaagatacgtcacagtgtcctcagttaaacctgtg
atggaactgataaaagacgaccttctctctccaggccctgatgacactgcactgacagcc
agcattaaacaaaacatgtgcagggtcctgactgaaaaatacaaatcacctgcaatccaa
gtcctcctgagaaaggccaccatcttggatccaaggtatcgtggcagcatggaggaggca
gaggcattggatgatgtcaaacaacagcttgtccaagagctactggacataatagggcca
gaagaaagtggagaaggtgccagtggtgagagctgcagcaacgctgctggaggaaacgtg
gatgaacctactgctaccgcacccaccaagaagatgaagctgagtgactttcttcgaaac
agaagagctcatctcacaagtcagacccaggcttcctttccaaaaagagtgcaggctgat
acagagctgaccaaattcctccaagaagatgcacttgatgcagcttgtgatcccttgatg
tggtggcatgacaatcaaagaaaatatcctttgatggccaagttggcccaaaagtacatg
tgcatttgtgcaacaagcaccagctcagagagaatgtttagcacagctggccacattgtt
actcctgagagatcctgccttaagccacacaaagtcaacatgttggtatttcttgctcgg
aatctgcaagactaa
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