KEGG   Pleuronectes platessa (European plaice): 128430050
Entry
128430050         CDS       T09923                                 
Symbol
focad
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
pplt  Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pplt03019]
    128430050 (focad)
Messenger RNA biogenesis [BR:pplt03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     128430050 (focad)
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 128430050
NCBI-ProteinID: XP_053271956
LinkDB
Position
23:complement(14358941..14397853)
AA seq 1807 aa
MEGLKIRFDFPSPVVQAQAVRNLVAAVLKEKGQNGQITQSSPQGPALEALWQQCCSDCAL
VRSSCCDAVVLLVDQGHADLHYILNCVLNLLPSARNVQGLIKVIGQLLQMQADQRDRESH
FACPYSIRNSPHPYITALENRVDCWPVLLLEMDDFIQQAADRKEPAHITMLAPFLQYLYC
EPQQQPQHALLRHSLLRVLLPVHPGAASALQAKDEEKPCAVSDSLLHLLCQLVPRMQVNS
VEAVLELCGFINALLQVLLRAPEEQWRSERARLLLQLLCACQRCLRLNRDCRPLLKLLLQ
LLPACQQELPVDELMIGVALLLLEAPAAQQTSLLTLALSLAPEHAELSPWLSPVLVLPVL
QLLSCAELTEPMADRRTHKLNHSLAHSLLRIVSKQTDKPRQPCPPLVLPLSSWYSELSVA
LSILRKVADDPALATEWLLSVRSAVSSSQRLPCSLTLIVTYLIIMGREDVCQLALDASQA
FAAADPCQVPSLIPVLLFKLGKDKNPNVAHAVLNCLPNLGTHKLCVPMVLQTLHMLASAP
KLRAVAMRLMTALWKKQDRVYPELQRLLGQQDSRVVVGRDAQWEQILARAACLRDICRER
PYQHGGDMLAAITLTLNQCTRPDMATPAALALQGLQELCRAEVVDIISTWRRLGPELSCE
SRPLMVKAVAELLALVPQLTVKSEEYEKLKVEVVSFLWNYAVSKDPEVASCGYKALAEFP
EAAHTITLLPEAARPATKLPEKEEEDKGEEKEEEEKDLSIPGSSYVKLMALTPVSVLPAF
EFFLTSLVKQEMSRMPRGVYFSALRGGNLRSDQGKTVAGIPAFMLKTYEKNKQPGLKPGL
AAGLLLSYELPVQTDRTGKPIDRFLISRCRSFQQTLTALIHEVNIQPSEWHRSLLLPQAW
RGFMSRAFHAVLQGRRADMEMQQKQGKENPEELQYKQHCAWLWARDQLTDVIKVATKDSP
VVQGNSILALSGLASVLAKYESNLPVDSDGSLGAGPEFVPTASWLSMVLETLLSIISSSY
RARGQVFPWFMHRSYSGENTASAIARSCASLALSLLVPVLVVWQRDGLVKVLTALKAGLP
GSTTADDSQAVQFHSGLALGMVLTSLHHQRLGDVSVQKDTDLLLSSLDALKGCSFNSDLE
YNTGCMLGLGLVLAALCSSGQKEQHVHVTQTLDKLLSDLQDSSGQGRMLQEVLAYAVACV
GVSAFSGGLIDAAKAEEVMNTVRTLTEESQQTPGFSLALGLVVHGLSLSGHGKAVDIHPR
LLAAWIKILLAEGCPTMQRLAAVNGLVALVGSESYLIQLKSELELSSQQQSRLNEVIRAI
TQILTFSGAIGLQSNSACLVGHLHLAHMSTSHSHTAVPQDFSYLPEKSVIRSIIDFVSEA
GKKGPEFSPLALVKTALTSLASVGASFQYPPINWSAVLSPLMRLSFGEDVQHQCVVLAAC
QAQSSQSASLFLGSWLSPPLVHSLSHQTRAHLFETLGMWMKHVAEDKLQIFVESLGLQQF
QEDLRPQRLSLCRSLLQGLAKAMALPNPPSNCWAILCSTTEKIFSLLPNEIQDDEVDLYM
GVAKCLSEMSDTEIDRIAKVTEGQMEKTCFVLAYLTSQGRVPLLGLNDIIAGVLRGWPSR
RVGWLLLQTFYQCRLASGSNTGVSKRMEWLLELMGHIRNVAYGVTSVSCGDSRMATDFLF
QVFAAAVVSWGDHFMPLLLGIRAQWFPWQLGSKPRALHHSLYGQESLTDHALPQCLLGVS
HSLALLLDKEPWSSQTQKFIDWLLSITEGPEQSLSTETINTAKAALLALKSSAEFEKKTV
WTRAYGW
NT seq 5424 nt   +upstreamnt  +downstreamnt
atggagggtctgaagatacggtttgattttcccagccccgtcgtacaagcacaggcggtg
agaaatcttgttgctgctgtgctgaaggagaaagggcaaaatgggcaaatcacacagtca
tcccctcagggcccggcgctggaggctctgtggcagcagtgctgcagtgactgtgctctg
gtgcggtcgtcctgctgtgatgccgtggtgctgctggtggaccagggccacgcagacctg
cactacatcctcaactgtgtcctcaacctcctgccctctgccagaaatgtccaggggctt
ataaaggtcattggacagctgctacagatgcaagcagaccagagagaccgagaatcccac
ttcgcctgtccttactccatcaggaacagccctcacccgtacatcacagccctggagaac
cgagtggactgctggccagtgctgctgctggagatggatgatttcattcagcaggctgct
gacagaaaggaaccagcccacattaccatgctggcccccttcctgcagtatctgtactgt
gaacctcagcagcaaccccagcatgccctcctccgacacagtctcctgcgggtgctgctg
cccgtacatccaggagctgcatcggccctccaggcgaaggacgaggagaagccctgcgcg
gtgtccgacagcctgctgcacctcctctgccagctggttccacgtatgcaggtaaacagc
gtggaggcggtgctggagctgtgtggattcatcaacgctctgcttcaggttctccttcgg
gccccggaggagcagtggagatctgagagagcccggttgcttctgcagctgctgtgtgcc
tgtcagcgctgcctcaggttaaacagagactgtcggccgcttctcaagctgctgctgcag
ctcctgcccgcctgccaacaggagctgccagtggatgagctgatgattggtgtggccctg
ctcctgctcgaggcccctgcagctcagcagaccagcctgctcactctggcactaagtttg
gctcctgagcacgctgagctgtcgccctggttgagtccagtcctggttcttcctgtgctg
cagctgctgtcctgtgcagaactcactgagcccatggctgaccggaggacacacaaactc
aaccacagcctggcacacagcctgctccgcatcgtcagcaagcagacagataaaccccga
cagccttgtccaccattggttcttcctctcagctcctggtacagtgagctcagcgtggct
ctctccatactgcgtaaagttgcagatgatccagctctggccactgaatggctgctgtcg
gtccgatcggccgtgtcgtccagccagcgcctgccctgctcgctcaccctcattgtgacc
tatctcatcatcatgggccgggaagacgtctgccagctggctttggacgcaagccaggcc
ttcgctgcagccgacccctgccaggtcccctccctcatccctgttctgttgttcaaactg
gggaaggacaagaatccaaacgtggctcatgctgtgctcaactgcctgccaaacctcggg
actcacaagctctgtgtccccatggtgctgcagactctccacatgctggccagcgccccc
aagctgagagcggtggcaatgcgcctcatgactgctctctggaagaaacaggaccgagtt
tacccggagctgcagcgtctgctgggtcagcaggatagcagggtggtggtagggagggac
gcccagtgggagcagatcctggccagggctgcctgcctaagggacatctgcagagagagg
ccgtaccagcatggaggtgacatgttggctgctattacgctaactctgaaccagtgcacc
agaccagacatggcaaccccagctgctctcgccctgcaaggactacaggagctgtgccgg
gcagaggtcgtggacatcatctcaacatggaggcgtctcgggccagagctcagctgtgaa
tcccgtccactgatggtcaaagctgtagctgagcttctggctctggttccccagctcact
gttaaatcagaagagtatgagaaactgaaagtggaggtggtcagctttctgtggaattat
gctgtgagcaaggatccagaggtggccagctgtggctacaaggctttggcagaatttcct
gaagcggctcacacaataactctcctccctgaggcagccaggccagctacaaagctccct
gaaaaagaggaggaggacaaaggggaggagaaagaggaggaggagaaggatctgtccatc
ccaggatcgtcttatgtgaaactgatggctctcactcctgtgtctgttctcccagccttt
gagttcttcttgacatccctggtgaagcaggagatgagcaggatgccacggggggtgtac
ttctctgccctgaggggggggaacctgcgttcggaccagggtaaaacggtggctgggatc
cccgcgttcatgctgaagacctacgagaaaaacaagcagcctgggctgaagcctggacta
gcagctggactgctgctcagttatgagctgcctgtgcagacggaccgcaccggcaaaccc
atcgatcgcttccttatcagccgctgccgcagcttccagcagaccctgacagccctcatc
cacgaggtgaacatccagccgtctgagtggcacagatccctcctgttaccccaggcctgg
aggggtttcatgagccgagcgttccatgctgtcttgcagggtcgacgtgctgacatggag
atgcagcagaaacaaggcaaagagaatccagaggagctgcagtacaaacagcactgtgcc
tggctgtgggccagagatcagctgacagacgtcatcaaagtcgctacaaaggacagtcct
gtggttcagggaaactccatcctggctttgagcggcctggcctctgtcctcgccaagtat
gagagcaaccttcctgttgacagcgacggcagcctcggggctggaccagagtttgttccc
acagccagctggttgtccatggtgctggagacgctgctaagcatcatcagcagcagctac
agagccaggggacaggttttcccatggttcatgcatcgctcctattcaggtgagaacaca
gcgagtgccatcgcccgctcctgtgccagcctggcgttgtccttgctggttcccgtgctg
gtggtgtggcagagggacggcctggtcaaggtgctgaccgctctgaaggccggcctgccg
ggctcgaccactgctgacgactcgcaggccgtccagttccactccggcctcgcactgggc
atggtgctgaccagtctgcaccaccaacgcctcggtgacgtctctgtgcagaaggacact
gatcttctcctcagctctctggatgctctaaaaggctgctccttcaactccgacctggaa
tacaataccggctgcatgttgggtctaggcctggtgctggcagctctctgcagcagtgga
cagaaggaacaacacgtccatgtcacccaaactctggacaaactgctctcagacctgcag
gacagcagtgggcagggacgcatgctgcaggaggtcttggcgtatgcagtggcgtgtgtg
ggcgtctcggccttcagtggaggcctcatagatgctgccaaggctgaggaggtcatgaac
actgtgcgcaccctgacggaggagagccagcagaccccagggttttctctggctctaggg
ctggtggtccacggcctgtcgctgtccggtcacggtaaagcagtggacattcaccctcga
ctcctggctgcttggatcaagatcttactggctgagggttgtcctactatgcagcgactg
gctgctgtgaacggcctggtggctttagtgggatctgagagttacctcattcagttaaaa
agtgagttggagctttcctcccagcagcagagccgactcaatgaggtcattcgagccatc
acacagatcctcacgttctcaggcgccatcggtttacagtccaacagcgcctgtctggtg
ggtcacttgcatttggcccacatgtccaccagccacagtcacacagcagtcccacaggac
ttcagttacctcccagagaaaagcgtcatcagatccatcattgactttgtctcagaggct
ggaaagaaaggtccagagttctctcctctggctctggtgaagacggctctgacctcgctg
gcatcggttggagccagtttccagtacccccccattaactggagcgctgtgctgtctcct
ctgatgaggctcagcttcggagaggatgtacagcatcagtgtgtggtactggcagcgtgt
caagctcagtcttcccagagtgcatctctctttctgggctcctggctgtcaccgccgctt
gtgcacagtctcagtcatcagacccgggctcacctctttgagaccctgggcatgtggatg
aagcacgtcgccgaggacaagctccagatcttcgtggagagtctgggcctgcagcagttt
caggaggaccttcgaccccagcgtctgtcgctgtgccgctctctcctgcagggtctcgcc
aaggccatggccctcccgaacccccccagtaactgctgggcaatcctctgctccaccacc
gagaagatcttcagcctcctgcccaatgaaatccaggatgatgaagtggacttgtacatg
ggagtggccaaatgtctgtctgagatgtccgatacagaaattgatcgaatagccaaagtc
acagagggtcagatggagaaaacgtgcttcgtcttggcttacctgacttcccaaggcaga
gttcccctgctgggtctcaatgacatcattgccggcgtgcttcgcggttggccgagccgc
agagtcggctggctcctcctgcaaacgttctaccagtgtcgcctggcctccggctccaac
acaggcgtctccaaacgaatggaatggctcctggagttgatgggccacatccgaaatgtc
gcctatggtgtcacctccgtctcatgtggagacagcagaatggccacagacttcctgttc
caggtctttgctgctgctgtggtttcctggggggaccacttcatgcccctcctgctcggc
atcagggcccagtggttcccgtggcaactgggctccaagcctcgcgccctgcaccatagt
ctgtacggacaggagtcgctcactgaccacgccctgccacagtgcctgctgggagtgtcc
cacagcttggccctgcttctggacaaagagccttggagcagccagacacaaaagttcata
gactggcttctcagcatcacagaaggtcctgaacagagtctgtcgactgaaaccatcaat
acagccaaagctgccctgttggccctgaagtcctccgctgagttcgagaagaaaactgtg
tggacccgagcgtacggctggtag

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