Pleuronectes platessa (European plaice): 128430081
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Entry
128430081 CDS
T09923
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128430081
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pplt04990
]
128430081
Domain-containing proteins not elsewhere classified [BR:
pplt04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
128430081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
128430081
NCBI-ProteinID:
XP_053272009
LinkDB
All DBs
Position
23:complement(7496012..7514720)
Genome browser
AA seq
1663 aa
AA seq
DB search
MGTGDYICVTLRGGAPWGFTLREGEGDTYRPFLISQVEEGGRAFSAGVQEGDEVVSLNGE
PCAELTLLRALVLIDTSIDRLQLLLKRFSSIPEGEDSDTHCGEREPSSEALASTTLHILS
PKHRSQSPRELYISESQNQLYYGEPDSNTESPKGPQLFCTQLDAPPSDGQRGREPVISEK
EGRRCFSPGNVVELQVSLSEQTSDQAGCCSLGSALGVEGGLSDREVIETIHTSTISHLVP
SSVREPLGQHGVVLGSPSVLGQVEVILQQPSAAGAGRGILSVGGPRVSGSVGSQSEGEEG
GGHCEGDPGSFTVSFGIPTDEASQAAEQDSDSEGDPDKPNKHRARHSRLRRSESLSEKQL
KEHKSKCKLIALLLTAAPPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPENSEDEDEE
DEKQETHTVEFTLVAPSDSELDKNFLTNVQSSKGVLTINWDKGLLDIERNLNNKAEMECL
PDTKGKGALMFVQRRQRMDELGAEHDELRRQGIPVEGVPEPEKKTMEQSYMQSTTEGHAY
MDVNVHQQSQQQHQYQQYQEQQFHEQQQSYQQQQQSYQQQQQSYQQQQQSYQQQQAYQQY
QQQQYEQQHYQQQQVYQQQQEYQQQHQQMQQYSSNVNGTVQHQTNEMQSSLSNRTAKPFS
AAPAMCGTNADSVGQGEELASRDERIATPASRTGLLMDARKRNTGKQMFTFKEAPKVSPN
PALLNLLNKGDKKLGFESGPEEDYLSLGAEACNFLQPPRAKQKNPPPVAPKPAIDPSSLW
SPQIEMNNQDMAQCAENSASTPAAAPTTDTTPAPEQEPTPAPAPEPSPPPAPAEAAASTN
TEGQHTWTLSEPESQKEPLQVTTQEENGQIYSNPQPEPAPVTTWAPAQSQSQQASTNSWH
PVQVQPQEPPPSQSPPQLPWVTRQNSQTLAQPPPPTNTWTPQIQPSWSQPEEPAQAQTHA
QAAWAQPPAQPQPHPQVQPPWAQPLEQPHPQQQAHPPWAQPIEQPQPQPQVHPPWAQPLE
QPEPQPQVQPPWAQPLEQPQPQVQPPWAQPLEQPQVQQMQPTWGQPQEPVQQQTQAPWAK
PLEADTQPQPPWMQPSQQKSQVQPPWVQQAQPESEPQSPWVQQQQKQAPQQAWPQAQAPA
QSQPPWVSAQPQQQQQPSINAWPPSQAQAQAQPPWMQAPQAQPQAQPQANLSPWAPVPAQ
AQPQPSWPQQPPGHGQHSINSWAQEQNQAPNQPPHWAQPVPSQSTPQPNWQPATAKSPPQ
PSTNTAWSPAQPQPQTHWAPESQQTPVNVSTSMVNTPPSPKPWLQPQNAPQNRTPPSPPQ
RMHSFTIRQRASPPINPMATILNPSSAGPANEMPVVRGKGADMFAKRQSRMEKYVVDSET
VEANKASRSSSPAASLPNEWKYSPNVRAPPSRAYNPIHSPSYPPAATKQIPQSSPASKDK
KKAKGKPAPKPLNVIDVMKHQPYQLNSSLFTYGPAVVAPKPPAPKPDSSPPDPPADNQPI
SYEQMAPIQPTGPLNAPYPQQAYGMPMQPMMHEGHYQQTPANVYANPNAYQQPPAVPYQQ
PYNPQYQQAAPPVYHPQAPQPANPSYQQAPQVSYPPASSPPYMAAPSVPYQPQPPSSFVV
PSFPVAARPESASGGNPAAAPKPRFSAKKSTAQVWKPAAVDKE
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattacatctgcgtgacgctgcgtgggggtgcaccctggggattcacc
ctgagagagggagagggagacacctacagacccttcctcatttcacaggtggaggaagga
ggccgcgccttctcggccggagtgcaggagggcgacgaggtggtgtcgctgaacggagag
ccgtgcgccgagctcaccctcttacgggcccttgtcctcatcgacacgtccatcgaccgc
ctgcagctgcttctcaaaagattcagctccattcctgaaggcgaggattcagacacacat
tgtggtgagagggaaccttcgtccgaggctttagcgagcaccaccctccacatcctctcc
ccaaagcacagatcccaaagcccgagagaactctacatatccgagtcccagaaccagctc
tactatggggagccggacagcaacacagagtcccccaagggaccccagttgttttgcacc
cagctggatgctcccccgtctgatggtcagagaggccgagagcctgttatcagtgagaaa
gaaggacgacggtgcttctcccctgggaacgtggtggagctccaggtttccctgtccgag
caaacgtctgaccaagcgggatgctgctctcttggtagtgcactcggggtcgaggggggg
ctctcagacagggaggttatcgagaccatccacacctccaccatatcgcaccttgtgccg
agctccgtgagagagccactgggccagcatggggtggtgctcggctccccttcggtgctg
gggcaggtggaggtcattttgcagcagccatcagcagccggggcagggaggggcatcctg
agcgtgggaggccccagggtcagtggaagcgtcggatcccaaagtgaaggggaagaagga
ggagggcactgcgagggagaccctgggtcttttacggtctcatttggaattcccacagat
gaggcgtcacaggcagcagagcaggactccgactctgagggggatccagacaaacctaac
aagcatcgggcaaggcactccaggctcaggcgtagcgagagtctgtccgagaagcagctg
aaggagcacaagtccaaatgtaaacttattgctctcctcctcacggctgctccgcccaac
cccaacaacaaaggggtgttgatgttcaagaaacatcggcaaagggccaagaagtacacg
cttgtgagctacggcacaggagaagacgaaccagagaacagcgaggacgaggacgaggaa
gacgaaaaacaagaaacccacactgtcgaatttacccttgtggctccgagcgattctgaa
ctagataagaatttcctgactaatgtccaaagtagcaaaggtgtgctgactatcaactgg
gacaaaggtctccttgatattgaaaggaacctgaacaacaaagcagagatggagtgtttg
cctgataccaaaggaaagggtgcccttatgtttgtccagcgacgtcagaggatggatgag
ctaggtgctgagcacgatgagctccggcgccaggggattcccgtggaaggagtgccggag
cctgagaagaagacaatggagcagtcctatatgcagtcaacgacagagggccatgcttac
atggatgtaaatgtacaccagcaaagccaacagcaacaccagtaccagcagtatcaagag
caacagttccatgagcaacaacagagctaccaacagcagcaacagagctatcaacagcag
caacagagctatcaacagcagcaacagagctaccaacagcagcaagcataccaacagtac
cagcaacagcagtatgagcagcagcattatcaacagcagcaagtgtatcagcagcagcaa
gaatatcagcaacagcaccagcaaatgcagcagtattcttcaaacgtcaatggcacagtc
caacatcaaaccaatgaaatgcagagttctttaagcaatcgcactgcaaagcctttctca
gctgctcccgcaatgtgtgggaccaatgcagattcggtgggccaaggggaggagctagca
tcccgagatgagcgcattgctacccctgctagtaggactggccttctgatggatgcaagg
aaaagaaatactggcaagcaaatgttcacgtttaaggaagccccaaaagtgtcacctaac
ccggccttattgaacctcctaaacaagggtgataagaagttgggttttgagtcaggacct
gaggaagactacctcagccttggggctgaggcttgtaatttcctccagcctccacgagct
aaacagaagaatcctccaccagtggctccaaagcctgcgatcgaccccagctctctttgg
tccccacagatagaaatgaacaaccaggacatggctcagtgtgctgaaaatagtgcttcc
acacctgctgctgcccccaccacagacactactcctgctccagagcaagagccaacccct
gcacctgctcctgagccctctccccctcccgcccccgcggaggctgctgccagcaccaat
acagaagggcagcacacgtggactctctcagagcctgaatctcaaaaagagcccctccaa
gtgacaactcaagaggaaaatggtcaaatttattctaatccgcagccagagcctgcacct
gtaaccacctgggccccagcacaatcccagtcacaacaagcatctaccaattcctggcat
ccagttcaagtgcaaccacaggaaccacctccaagtcagtccccaccacagttaccttgg
gtgacaagacaaaattctcagaccctggctcagcctccaccccccacaaacacttggacc
cctcaaattcagccatcctggagtcagcctgaagaaccggcacaagcccagacacatgct
caggcagcctgggcccagcctccagcgcaaccacagcctcatccccaggtccaaccacca
tgggcccagcctctagagcaacctcatcctcagcaacaggcccatccaccctgggcccag
cctatagagcaaccacagcctcagccacaggttcatccaccctgggcccaacctctagag
caaccagagcctcagccacaagttcagccaccctgggcccagcctctagagcagcctcag
ccacaagttcagccaccctgggcccagcctctagagcagccacaagttcagcaaatgcaa
ccaacttggggtcagcctcaagaaccagtgcagcagcagacccaggccccatgggcaaag
ccattagaggcggatacacagcctcaaccaccatggatgcaaccatcccagcagaaatcc
caagtacaacctccttgggttcaacaggctcagccagaatccgagccacagtcgccttgg
gttcaacaacaacagaaacaggctccacaacaagcttggccacaggcccaggcacccgct
caatcacagccaccttgggtctcagctcagcctcagcagcaacagcagccttcaattaat
gcatggccaccatcacaagctcaagcccaagctcagcccccgtggatgcaagcaccccaa
gcacaacctcaagcgcagcctcaagccaatttgagtccatgggcaccagtacctgcccag
gctcagccccaaccatcatggccccagcaacctccaggccatggacagcactcaataaat
tcttgggcacaagagcaaaaccaggccccaaatcaaccaccacattgggctcaaccagtt
ccatcccagtccacaccacagccaaactggcaaccagccacagcaaagtctccaccacag
ccatcaacgaatacagcctggtctccagcacagcctcagcctcagacacattgggcacca
gagtcccagcaaacacctgtgaatgtttccacgtcaatggtgaacactcctccttctcca
aaaccgtggcttcaaccacaaaatgccccacaaaaccgcaccccaccctctccaccccag
cgaatgcactcttttaccatacgtcaaagagcttcaccgccgatcaacccgatggccact
atcttaaacccatcatcagcaggtccagcgaatgagatgccagttgtaagagggaaggga
gctgatatgtttgccaagagacagtctcgtatggagaagtatgttgtggactccgagact
gtggaagcgaacaaggcgagccggtcatcatcaccagctgcctccttaccgaacgagtgg
aaatatagtccaaatgtacgtgctccaccttcacgggcgtataatcctattcactcccct
tcttatcccccagcagcaacaaagcagatccctcaatctagtcctgcatccaaagataag
aaaaaagccaaagggaaacctgcacctaaaccccttaatgttatagatgtgatgaagcat
caaccatatcaacttaattcctccctctttacttatggtccagcagtggtggctccgaag
ccccctgcgcctaagcccgacagttcccctcctgacccccccgctgacaaccaaccaatt
agttatgagcaaatggctcccatccagccaactggaccacttaatgctccatacccccag
caggcctatgggatgcctatgcagccaatgatgcatgagggccactaccagcaaacccca
gctaatgtttatgccaaccctaatgcttatcagcaaccccctgccgtcccttaccagcaa
ccatataacccacagtatcaacaagctgccccacctgtttatcatccccaagctcctcaa
ccggcaaacccttcctaccaacaggcaccgcaggtttcttacccaccggccagcagccct
ccctacatggcggctccttcagtgccttaccagccgcagcctcccagtagctttgttgtt
cctagtttccctgtggctgctcggcctgaatctgcatcaggtggtaaccctgcagccgct
cctaagcctagattttctgccaaaaagagcacagctcaggtgtggaagccagcagcagtt
gataaagagtga
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integrated database retrieval system