Pleuronectes platessa (European plaice): 128430311
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Entry
128430311 CDS
T09923
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128430311 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pplt04091
]
128430311 (frem1a)
Lectins [BR:
pplt04091
]
C-Type lectins
Lecticans
128430311 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
DUF7597
Motif
Other DBs
NCBI-GeneID:
128430311
NCBI-ProteinID:
XP_053272326
LinkDB
All DBs
Position
23:complement(14151100..14176010)
Genome browser
AA seq
2183 aa
AA seq
DB search
MASQGQIQAWTLLAVLLLGMTSSSQGSLVKVNKRLKVKRGQSAYLDEGDLQFHIPRRKDA
CKVELVFNEPITQRVGELMPQVFDCHYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETH
MEVFTLHVDIVEPECSIIKLGPHSLKVPEFYSLSEELDGNALSFHYERRSSLECSIHLTS
HDTHLPAHGQLVTGEPEKATKRGDEPESFIPLRQQLDNKARATCKTEDCLKGLKLVKMTK
IPCDDFLLMGLRYQHRDPPSPDIDYITIRLDLKDSRSGSIYKSEQIWIPVRIVGAMPNQP
PKPSFMSMFILEVDQFILTPLSTATLDAEDEETVKQLLVFNITKPPVDGFLTHLSDHTRP
ISSFTWLDLNDMLIGYQPPNSSHTQRRNYEIEFEVHDFFFEKSPSMTVHVSVRNADTNAP
RVSWNMGLSLLEGQSRPITWDQVQIVDNDNLKAVRVITVDGLQHGRLTVRGGKGFMFTVN
DIRAGEVCYHHDDSDSTKDFIIFRITDGRHQTRHKFPINILPKDDSPPFFITNMLLEVSE
GQTALLMGSTLQASDMDSSDDYILFNITRPPRSGEVMKIPGPGLTGYPVSHFLQRDLSQS
LVYYRHLGNEVFDDSFEVVLSDFHDPPNLSEPQMVLVHIEAVPDQPPKEVPGASRYLVNK
ETEVVHITREQLHFVDLESPDSELTYTVTTPPFHIGPHSTPDAGRLFLVDSIPKFTKDSN
APVLRLFTQHAVNFMKVAYMPPIMDIGPYPQHIQFVLSVTNRLGKTVTGICFNITVTPED
NQPPQVITNALTVDEGGECWLGPEHLLLSDMDSMEEALRVVLQKEPQHGALQLGGLLLQP
GQAFTVQDVKSFKVSYNHDNSETLEDNIELSATDGSNSVSFILQVKVKPINDEVPVLVAG
LKPVLNCAEGQEITITAEYIFASDADSDNGSLGFLIARQPYHGVVLRNGVVIDHFLQADI
TAGIITYKHTGLEIGLTPRHDTITFVISDGETENSALCCGGGNPTRTRGTAQLRDSLPVY
DLQIMVFPVNSQAPSLETGDIFMVDEGGTAPITSSHLKASDVDTVLDDLVVSLISPPQFG
YIENVLPSPGFEKSNTGISIASVSFKDIIDGKVNYVQSRHQRMEPTVDQFMLCVSDGKHS
SAHVPFYIIIKPTNDEIPDFVARNITVREGETKQLDSSVLHAADLDVPRNVLLFSIVKAP
QHGSIIDHNSERPISKRQEASPHSPVVDFTMTDLANGMDLMYMHDDSENMEDTFTIQLTD
GRHQLHRQVMVKVLPVNDEEPRTIRNNGLEVEPGETRLISSATLFAHDGDSPSSQVIYTF
ESVPTQGLLQLKEGQDWVTLTAGKNCAQEMVDMNLLRYVHTGLHAAKTQDFFVFHLLDGT
NQSPPQHFHISVRDLEKGNIAIFVKPVNVSRGDRVVLTTDVLLATDGTEKPEELMYVITN
PPAQGHIEYIHHPGLAISTFSQMDIAANLVAYVHDNRANAHKETFQFVVSNGKTSRNGSF
EVTVEMVDRVLPSLSSNKGITVPQGSSIILGPDCLALSDPDTPPSVLTFTLLQPPQYGRL
LLVDTTLTAGSNFTLRHIQEMEVSYKHDGGPSQIDRFAFTASDSTNRGFLLDGRLHLEPV
FFTIQIKPLDKSAPEVVKLLPLWKAEVLGDGRYGIYLSSRELKAHDIDSREDELILSIVR
PPYFGYLENMTTGGFVTQSFSQAELNKRTIIYIINPDRESLSDSLEFTVSDPLGNTGPSH
ILEFSWSSVELSLSQLSVCEEQGGVSLDIIRKGNLAESSYITVKVKAVTATAGKDFLISP
SSLIQLDPGVSKRSWQIEIIQDYLEEVEEMFEVLLISPEATTIGIINMAQVTIRDSGRGQ
CRLNQDQEAPLLGGKEIRSDTYPRHGSIKLEKLPLGTESVLWARGESISTPARLPKKKLR
VMDNPKSIRPSSVFHNGTEIVYTYHGIMQVQVEDDTSPSRKGRKANIRVVSRGSQQHAAA
ALTESKQGPQRKISEHQKTELVKGHASADNFIPKPCVPALMGLLHINQTTNQLFHCNGVS
WKPWAPTDQMVGAQKCPQGWTFHSGQCYTLSTEHKATWSTANRACRERYKGSLASVLSKD
DMDWLWDFSGRKPFWIGLNDREGRGRWEWVGGEPVTYTNWRKTPPRSKRKGGKKCILVWR
KAKWQIRDCKTSRGHRFVCSVKT
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacagggtcaaatacaggcctggacgttgctcgcagtgcttctgctgggaatg
acctcctcttcgcagggttccctcgtgaaagtcaacaagcgtctaaaggtgaaacggggt
cagtcggcctaccttgacgagggcgacctgcagttccatattccccgtcggaaggatgcg
tgcaaggtggagctggtgttcaacgagcccataactcagcgagtgggagaactcatgcct
caggtttttgattgccattatctggctgatgaggtgaagtatgtccacaatggatgccca
ctgttaaaagaggacactgtcaagcttcgactgtacaggttcacagagacagagacacac
atggaggtgtttactcttcatgtggacattgtggaacctgaatgcagcattataaagctt
gggcctcattccttgaaggtgcctgaattctacagcctctctgaagaactcgatggcaac
gcgctgtctttccactacgagcggaggtctagcctggagtgtagcatccatctgaccagc
catgacacccacctgccagcccatggccagctggtcactggagagccagagaaagccacc
aagagaggggacgagccagagagtttcatccccttacgtcagcaactagataataaagcc
agagcgacgtgtaaaaccgaggactgcctaaagggtctgaagctagttaagatgaccaaa
attccctgtgatgacttcctgttaatgggacttcggtatcagcacagagatcctccatct
ccagatatagattatattactattcgactggacctcaaggactccaggagtggcagcata
tacaagtctgaacagatctggattccagtgcggatagttggtgcaatgcccaatcagcct
ccgaaaccatccttcatgtccatgttcatcctggaagtggaccagttcatcctcactcca
ctttccactgctacactagatgctgaagatgaggaaactgtcaaacagctcttggttttc
aacatcaccaaaccccctgtggacggcttcctcactcatctgtccgatcacacccgccca
atctcctccttcacatggctggatctcaatgacatgctcattgggtatcaacctccgaac
tcttctcatactcaacgaaggaattacgagattgaatttgaggtgcacgattttttcttt
gagaagagcccatcaatgactgtgcacgtgtctgtaaggaatgcagacacgaatgcaccc
agagtttcctggaacatgggtctaagcctattagagggtcagtctcgtcctataacgtgg
gatcaggtccagattgtggacaacgacaacctgaaagctgtccgtgtcatcactgtggac
ggtctgcagcacggaaggctcactgttagaggtggaaaaggcttcatgttcactgttaac
gacatcagagcaggcgaggtttgctatcaccatgacgacagtgactcaaccaaagacttc
attatcttccgtatcactgacggtcgccatcagacacggcacaagttccccatcaacatc
ctgccgaaggatgacagccctcctttcttcatcaccaacatgctgctggaggtgtctgag
ggccaaacagctctgctcatgggctccaccctacaggcttcagacatggactcaagtgac
gactacatcctatttaacatcacccgcccgccgcggtcaggagaagtcatgaaaatccca
ggaccggggctcacaggttaccctgtcagccactttctgcagagggacctgtcacagtcc
ttggtttactatcgacaccttggaaacgaggtgtttgatgattcttttgaggtggtgctg
tcggatttccatgaccccccaaacctgtcagagccgcagatggtgctggtgcacatagaa
gctgttccagaccaaccacctaaagaggttcctggggccagccggtatcttgtgaacaaa
gaaacagaagtggtccatataacacgagaacagcttcactttgtagacctggagtcccct
gacagtgagctgacatacacagttactactccgcctttccacattggtcctcacagcact
cctgatgcagggagattgttcctggtggacagtatacccaaattcaccaaagactccaat
gcacctgttctgaggctcttcacgcaacatgcagtgaacttcatgaaagtggcctacatg
cctccaatcatggacatcgggccttacccccagcacatccagtttgttctctctgtcaca
aaccgcctgggcaaaacagtcactgggatctgctttaacatcactgtgacaccagaagac
aaccagccaccacaggtcatcaccaatgctctgactgtagatgagggaggggagtgctgg
cttggccctgaacacttgctgctctcagatatggactctatggaggaagccctgcgggtg
gtgctgcaaaaggaaccacagcatggagccttgcaactcggtggcctcctgctccaaccg
ggccaggcgttcaccgtgcaagacgtgaaaagctttaaagttagttacaatcatgacaac
tcagaaactctagaggacaacattgaactctctgcaacggatggaagcaattcagtcagt
ttcatcctgcaagtgaaggtgaagcccattaatgatgaggtcccggtgttggttgctggt
ttgaaaccagttctcaactgcgctgagggtcaggagatcaccatcacagcagagtacatc
tttgcttctgatgcagacagcgacaacggcagcctgggcttcttgattgcgcggcagccg
tatcatggcgtggtgctacgaaatggtgtcgtgatcgatcacttcctccaggcagatatc
acagctgggatcatcacctacaaacacacaggattggagattggtctcactcctcgccat
gacaccatcacatttgtcatttcggatggagaaactgaaaactctgctctgtgctgcggg
ggaggaaatcccaccaggaccagaggtacagcgcagctccgggacagcctccctgtgtac
gacctccagatcatggtgtttccagtcaacagccaagccccttcattggaaacaggagac
atctttatggtggatgaaggtggaactgccccgataacttcttctcatttgaaggcctct
gacgtggataccgtcctggatgacctggtggtcagtctgatttctccaccccagtttggt
tacattgaaaatgtcctgccaagtcctggctttgagaaaagtaacacaggcataagcata
gcctcagtttcattcaaagacatcattgacggtaaggtgaactatgtacagtccagacac
cagaggatggagcccacagtcgaccagttcatgctctgtgtgtcggatgggaaacacagt
tctgcgcatgtgcccttctacattattatcaaaccaacaaacgatgagatcccagacttt
gtggctcgcaatatcacagtacgagaaggagaaacgaagcagctggactcgtctgtgctg
cacgcagcggatctggacgtcccgaggaacgtcctgctgttcagcatcgttaaagcccct
cagcatggcagcatcattgaccacaacagtgaaaggcccatcagcaagagacaagaggct
agtccccactcacctgtggtggactttacgatgacagatctggctaatggtatggatctg
atgtatatgcatgatgactctgagaatatggaggacacttttaccatccagttgacagat
ggccggcaccagctccacagacaagtgatggttaaagttctgccagtcaatgatgaagag
cctcggactataaggaacaatgggctggaagtggagccaggtgagacaaggctcatatcc
agtgcaacactgtttgcacatgatggtgatagtccctcttctcaggtcatctacacattt
gagagtgttcctacccaaggactacttcaacttaaggagggtcaggactgggtgacgctg
acagccggaaagaattgcgcccaggaaatggtggacatgaaccttctgcgctatgtgcac
acaggcctgcacgccgccaaaacacaggacttctttgtcttccacttgctggacggaacg
aatcaatcaccaccacagcacttccacatctctgtcagagatcttgagaaaggaaatatc
gccatctttgtaaaaccagtgaacgtcagtcggggtgaccgcgtggttctcaccacagac
gtactgttggccacagacggcacagaaaagccagaggagcttatgtatgtcatcaccaac
cctcctgctcagggacacatagagtacatccatcatcctggactggccatctccaccttc
agccagatggacatagcagcaaacctcgtagcttatgtgcacgacaatcgagcaaacgca
cacaaagaaaccttccagtttgttgtgagtaatgggaagaccagccgaaatggaagcttt
gaggtcacagtggaaatggtggatcgagttctaccatctctgtcctccaacaaaggcatt
acggtcccccagggttcctccatcatcctgggtcctgactgccttgccctttccgaccca
gacactccacccagcgtcctgaccttcaccctcctccagcctccacagtatggcaggctg
cttttagtggacaccaccctgactgcggggtcaaacttcacactcagacacatacaagag
atggaggtatcatataaacatgatggagggccgtcacagatcgaccggtttgccttcacg
gcctctgacagcaccaatcgaggcttcctcctggatgggcggttacatttggaaccagtg
ttcttcaccattcagatcaagcctttggataagtctgctccggaggttgtgaagctactc
cctctttggaaggcagaggttctgggcgatggacgatatgggatctatctgtcatcgcgg
gagctgaaggcccacgatatcgacagcagagaagatgagctgatattatccattgttcgc
ccgccctactttggttacctagaaaacatgacaacaggtggctttgtgacacagagcttc
tctcaggcggagctgaacaagagaaccatcatctacatcatcaatccagacagggagtct
ctctcagacagtctggagtttacagtgtctgaccctctagggaacacagggccctctcac
atcctggaattcagctggtccagcgtggagctgtctctgtctcagctctctgtatgtgag
gagcaagggggtgtctcgctggacatcatccgcaagggaaacttggcagagtcatcatat
atcactgtcaaggtgaaggctgtgactgcaacagctggtaaagacttccttataagtcct
tcttccctcattcagttggatccaggagtgtcaaagaggagctggcaaatcgagattatt
caggattaccttgaggaggtcgaggaaatgtttgaagtgttactcatctcccctgaagcc
acaacaataggcatcatcaacatggctcaagtcaccatcagggattctggaagagggcag
tgcaggctgaaccaggatcaggaggctcctctccttggaggaaaagagattaggtcagac
acctacccccggcatggatccattaaactggaaaaacttcccttaggcaccgaatcagtc
ctctgggcccgcggagagagcatctccacacctgcacgtctcccaaaaaagaaactcaga
gttatggacaatccaaagtctattagaccttcctcagtttttcacaatggaacagagatt
gtttacacgtatcatggcatcatgcaagtgcaagtagaggatgacacctccccatcaagg
aagggcagaaaagcaaacattcgggttgttagcagaggctcacagcagcacgcggcagcc
gcgctaactgaatctaaacagggtcctcaaagaaagatctcagaacatcagaaaacggaa
ctggttaaaggacatgcttcagctgataacttcatccccaagccctgtgtgccagcactg
atgggactcctccatatcaaccaaaccactaatcagctctttcactgcaacggtgtgtcc
tggaaaccctgggcaccaaccgatcagatggtgggagctcagaagtgtcctcagggctgg
acctttcatagtggccagtgctacaccctcagcactgagcacaaagccacctggagcaca
gctaacagagcctgcagggagagatataaaggaagtctagcaagtgttctctctaaggat
gacatggactggttgtgggacttcagtggaagaaaaccattttggattggtctgaatgac
agagaaggccgaggacgctgggagtgggtcggcggcgagccggtcacctacaccaactgg
agaaaaacgcccccaaggtcaaagaggaagggaggcaaaaagtgcatcctggtgtggaga
aaagccaagtggcagatacgggactgtaaaaccagcaggggtcatcgcttcgtgtgttca
gtcaagacttga
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integrated database retrieval system
