Pleuronectes platessa (European plaice): 128430356
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Entry
128430356 CDS
T09923
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt02010
ABC transporters
pplt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128430356
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128430356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pplt02000
]
128430356
Transporters [BR:
pplt02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128430356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
ABC2_membrane_2
AAA_23
Motif
Other DBs
NCBI-GeneID:
128430356
NCBI-ProteinID:
XP_053272374
LinkDB
All DBs
Position
23:complement(6458309..6593088)
Genome browser
AA seq
2243 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVELIWPLFLFFILVWVRTTNKPIYKSQCHYPNKA
MPSAGVLPWLQGMICNINNPCLNYPTPGEAPGQVNNFNNSIIAGVLIELQSLVENGSILR
KAQLLADDIDQWSSVLSQSNPGNAQSVTLKKVLRDDETFSKHLKENLKVPAAVVESLLNA
TIYLNPERPGDLRTLLCDGTGLDEYLRFSSPAEKEAFQNVSCSLTRQQLINTQQVFRQNL
DVRKLLSEVPQSLSLNPADTVTLVGRTTRNALPVIEEMARLQNSMVFQAAGSLNFQENLI
GSVNMLLCGDQPDLNSSSMTLSLRSPGRMDKNESIPVTGNSSDAFCQTLVDTLESTPGLR
NIWSTFKPLVQGKVLYTPDTPAARLLVNKANGTFQALATLKELADSWEELGPRVWDFFQN
GSQVNALRALLENPVFAAALDQRLNGTRWTAELLDNFLYNGPPEDRPPGMPTTDWRDAFN
ATTQILKLLSNFLGCLDLNKFEAVSDESQLVSKALELLENETYWASVIFENLQPNFSQPP
SYVKYKIRMDVDEVEATNKLKERSWSPGARDNSFNDLRYIWGGFAYLQDMMDNGITQVQT
SKSQPLGVFAQQMPYPCYVDDVFIQSIGGILPMFLVLAFMYSVCMCIKSLVLEKELRLKE
VLRVVGIQNGALWFSSFTENIVLLAVPSLLISLMVKYGKVLQYSDPSLIFVFLLVFCMAT
ITQCFFISVFFSKANLAAACGGLIYFVLYLPHILCYAWRDVMGFGAKVGVSLLSCVAFGF
GCENFAKYEEQGIGIQWSNMNTSPEEGERYTFLLSIIMMLVDSLIYWILTWYIENVFPGQ
YGIPKPWYFPFTASYWCGRASVARVDTGGLKDYSLHNEYLEKPPPDMKAGVSVRNLVKIY
STGKKLAVDGLTVDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDILTDM
DRIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGLSRDEVKVEMDQMIKDVGLPHKRKEL
AKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTH
HMDEADILGDRIAIISQGKMRCCGSSLFLKKSFGSGYYLTLVRDGTEKMAAQRNGIFHNQ
AAEEKDFTSSSSLDDGIGSQSSLDPSDLTAVGQVVRRHVPEAVFLESIGQEITYILPYSG
ARDGTFALLFKELDLATEELGLTSYGISDTTLEEIFLKVAEDTGVDADIQTVEPVVRDYE
RSSRKSKRNSIASLHTTSAQPQHGSGMTELKERFASKVEDLQRTSAVSGRGSSVITGWEL
IRRQFLALFIKRFHHARRSRKGVIAQVILPVLFVCMSLIFSLILPPFAEYPSLQLQPWMY
GLPQTTFYSNDGPDNVEVSQVVDTLVNNPGFGTRCMDGNPIPMLPCSSSGSDWFTPPVDQ
SVSDIFLNGNWSMSNPSPSCQCSTPKRTTMLPDCPPGAGGLPPPQRIQNTTDTLEDLTGR
NMSDFLLKTFEQSGKTRYGGVSVGGVNSQVRLTEADIEVVFRDLRDLLGSSQDNVTDELL
QKSESLLKKLGTRDNVKVWFYNQAWHGVVSFLAVANNAILRGNLAAGEDPRQYGISVSNH
PLNLTKSQLSFVALATTSNDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVN
PAVYWLANFAWDMCNYIVPCLIVIAIFLAFQQKAYVSPPNLPALILLLILYGWSITPMMY
PASFIFSVPSTAYVVLTCINLFIGINGSVATFFMELYDDDSVSRINDIVKQVLLIFPHFC
LGRGLIDMAKNQAMATLFSSFGEDRFEDPLSWDMVGKNLCAMSIQGVVMFAITILIQYKF
FCKPRLISGKSLSAEEEDIDVARERERVYEGRAQNDLLKIRDLTKVYSRKSTPAVDRLCV
GVPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAVLNGHSIRTEMSEVHQNMGYCPQF
DALDDLLTGREHLEFYGRLRGVPEPEVAMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLS
TAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSVIREGRSVILTSHSMEECEALCTRM
AIMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVLQTFSGSVLKEKHHN
TLQYQLPYTQGALASIFSQFTIHQQRLGVEDYSVSQTTLDQVFVNFARHQHVEEEAQGYD
NPVDTSDEKPLSSRKISQEAEKV
NT seq
6732 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctgcggaagaga
caaaaggtgcgactggtcgttgagctcatatggcctctgttcctcttcttcatactggtg
tgggtgcggaccaccaataagccaatttacaaaagccaatgtcactatccaaataaagcc
atgccgtcggccggcgtgctgccgtggcttcaaggtatgatctgcaacatcaacaatccc
tgtttgaactacccgacgcctggggaggcaccaggccaagtcaacaacttcaacaactcc
attattgctggtgtgttgatagagctgcagagcctggtggagaacggatctattctcagg
aaggcacagttgctggcggacgacatcgaccagtggtcctcagtcctgtcacagtcgaac
cctgggaatgctcaatcagtgactctaaagaaggttctgcgagacgatgagacgttctcc
aaacacctgaaagagaacttgaaggtgccggcagcagttgtcgaaagcctcttaaatgcc
acgatttacctcaacccagaacgaccgggcgacctgaggacgctcctgtgcgacgggaca
ggtctggatgagtacctccgattcagcagccccgctgagaaggaggcttttcaaaatgtc
agctgctccctcactcgacagcagctgattaacacccagcaagtgttccggcaaaacctg
gatgtgaggaaactgctgtcagaggtgcctcaatctctcagcctgaatccggcagatacc
gtgacactggtggggagaaccactcgaaatgctttacccgtgattgaggagatggcgagg
ttgcagaactccatggtctttcaggcggccggttcattgaatttccaagaaaacttgatt
ggcagtgtcaatatgctgctgtgtggagatcagcctgacctcaactcctccagtatgacc
ctcagtttacgctcccctggacgaatggataagaacgagtcgatccccgttacgggcaac
agttccgatgctttttgtcagacccttgtcgacaccctggagagcacacctggtctgcgc
aacatttggagcacgttcaagccgttagtgcaaggcaaagtcctctacacccccgacaca
cctgctgcccgcctgctggtgaacaaggcaaatggtacattccaggccttggctacgttg
aaagagctggctgattcgtgggaggagctcgggccccgcgtctgggatttctttcaaaat
ggctctcaagtgaatgcactacgggctctgctggagaacccagtgttcgcggccgccctc
gaccagcgtctcaacggcacaagatggacggccgagctgctcgacaacttcctgtacaac
gggcccccggaggatcgtccacctggaatgcccaccaccgactggagggacgctttcaac
gccaccactcagatcctgaagcttctctccaacttcctcggctgtttggacctgaataag
tttgaggccgtttccgacgagagccaactggtgagcaaagcactggagctactggagaac
gagacgtactgggccagtgtcatctttgaaaacctgcagcccaacttcagccagccgccg
tcttacgtcaaatacaaaatccgcatggacgtcgatgaagtggaggcaaccaacaaatta
aaagaaaggtcctggtctcccggggcccgagacaattcctttaacgacctgcgctatata
tggggaggcttcgcctacctgcaggatatgatggacaacggcattacacaggtgcaaacg
tcaaagagccagcccctcggagtgttcgcccagcagatgccatacccctgctacgtggat
gacgtcttcattcagagcattggaggcatcctgcccatgttcctggtgctggccttcatg
tactccgtgtgcatgtgcatcaaaagcctggtgctggagaaggagctgcggctcaaggag
gtgctgcgcgtcgtcggcattcagaacggcgccctctggttctccagcttcacagagaac
attgttctgctcgcagttcccagtttgctcataagtctcatggttaagtacgggaaagtg
ctgcagtacagcgacccctcgctgatcttcgtcttcctgctggtgttctgcatggccacc
atcactcagtgcttcttcatcagcgtcttcttctctaaggccaacttggcggcggcgtgc
ggcggcctcatctactttgtcctctacctgccgcacatcctctgctacgcctggagggac
gtcatgggtttcggggccaaggtcggcgtgagtttactgtcgtgtgtggccttcggcttc
ggctgtgagaacttcgccaagtacgaggagcaaggcatcggtattcagtggagcaacatg
aacacaagtccagaagagggggagcgctacacgttcctactgtccatcatcatgatgctc
gttgactccctcatatactggatcctcacctggtacatcgagaacgtctttccaggccaa
tatggaatccccaagccgtggtacttccctttcactgcatcttactggtgtggcagagcc
tcagtggcccgtgttgacaccggtggtttgaaggactacagcctacataacgaatatctg
gagaaaccgccgcccgacatgaaggccggggtctcagtccgcaatctggtcaaaatctac
agcacgggaaagaagctggccgttgacggactcaccgtggacttctacgagaatcagatc
acatctttcctcggccacaacggagccggaaaaaccaccacaatgtcaatcctgacagga
ctgttcccgcccacgtcaggcaccgctctcatcaacggatacgacatcctcaccgacatg
gacaggatcaggaagtacttgggaatgtgcccacagcacaacgtcttattcaatgagctg
acggtggaggagcacatctacttctacgcccggctgaaaggactcagccgcgacgaggtg
aaagtcgagatggaccagatgattaaggacgtcggtttaccacataagaggaaggagctc
gctaagaacctgtcgggcggcatgcagaggaagctctccgtggccatagcgtttgtcgga
ggctccaaaatcgtcatcttggatgaaccgacggcgggagtcgacccctacgcccgcagg
ggcatctgggagctgctgctaaaatacaagcagggtcgcaccatcatcttgtccacgcac
cacatggacgaggcggacattttaggggaccgcatcgccatcatctcccagggcaagatg
cgctgctgcggctcctcgctcttcttgaagaaaagcttcggcagcggctactacctcacc
ctggtccgagacgggactgagaagatggccgctcagcgtaatggtatcttccacaatcag
gccgcagaggagaaggacttcacttcgagcagcagccttgatgacggcatcggcagccag
agcagcttagatccctcagatctgacagccgtgggtcaagtcgtgcggcgccacgtcccc
gaggcggtcttcttggagagcatcggtcaagagatcacctacatcctgccctacagcgga
gcccgagatgggacctttgccctgctcttcaaagagctggacctggccacggaggaactc
ggcctgaccagctacggcatctctgacaccacgctggaggagatatttcttaaagtggca
gaagacactggagtggatgcagacattcaaacagtggagccggttgtgagagactacgag
aggagctcccgcaaatccaagcgcaacagcatcgccagcctccacacaacatccgcacaa
ccacaacacggctccgggatgactgagttgaaggagcgatttgcaagtaaagtggaagac
ctgcagaggaccagcgcagtcagtgggaggggatccagcgtcatcaccgggtgggagctg
atcaggaggcagttcctggcgctcttcatcaagcgcttccaccacgcccgccggagccgc
aagggagtcattgcccaggtgatcctgcctgtgttgttcgtgtgcatgtctctgatcttc
tcactcatcctcccgccgttcgctgaataccccagtctgcagctgcagccctggatgtac
ggcctgccccagaccacattctacagcaatgacgggccagacaacgtggaggtgtctcag
gtggtggacacgctcgtgaacaaccctggattcgggactcgctgcatggatggaaacccg
ataccgatgttgccatgttcctccagtgggtctgactggttcactccacccgtagaccag
tcagtgagcgacatcttcctcaacgggaactggagcatgtcgaacccctccccttcctgt
cagtgcagcacgccaaaacggacgaccatgttacccgactgtccccctggagcggggggg
ctccctccacctcagaggatccagaacacgacagacacattggaagatttgactggccgg
aacatgtctgacttcctcctcaagacttttgagcaatcgggtaaaacgaggtacgggggg
gtgtctgtcggaggagtcaactcacaagtccgtctgactgaggcagatatcgaggttgtc
ttcagggatctaagagacctgctcggttcatctcaggataatgtcactgatgagctctta
cagaagtctgagtcgctgctgaagaagctgggaaccagggacaacgttaaggtgtggttc
tacaaccaggcgtggcacggcgtggtgtctttcctcgctgtggccaacaatgccatcctg
aggggaaacctggcggccggagaggacccccgccagtacggcatctctgtgtccaaccac
cccctgaacctcaccaagtcgcagctctccttcgtggccttggccacaacctccaacgac
gtggtggtgtccatctgcgttatcttcgccatgtccttcatcccggccagctttgtcctc
ttcctcatccaagagcgggtgaacaaagccaagcatctgcagtttgtcagcggagtgaac
ccggctgtgtactggttggccaattttgcctgggacatgtgtaactacatcgtcccttgt
ttgattgtgattgcgatcttcctcgccttccaacaaaaagcctacgtctcgcctcctaac
ctgcctgcgctgattttgctgctcattttgtatgggtggtccatcacccccatgatgtac
cccgcctccttcatcttcagcgtccccagcacggcctacgtggtgctgacctgcatcaac
ctcttcatcggtatcaacggcagcgtggccacgttcttcatggagctctacgacgacgat
agcgtctcccgcatcaacgacatagtgaagcaggtgctgctgatattcccacatttctgt
ctgggcagagggctgattgacatggccaagaaccaggcaatggccacgctcttcagcagc
tttggggaggaccgattcgaggatccactcagctgggatatggtgggaaagaatctctgt
gccatgtccatccagggagttgtcatgtttgccatcacgatcctcatccagtataagttc
ttctgcaaaccgaggcttatttctgggaagtcattatctgcagaagaggaggatatcgat
gttgcacgggagcgtgagcgagtgtatgaaggcagagcccagaatgacctcctgaagatc
cgtgacctcactaaggtatactctcggaagagcacccctgctgtggacaggctatgcgtg
ggcgtgcctgctgcagagtgtttcggcttgctgggaatcaatggggctgggaaaaccacc
acgttcaagatgctgacaggagatatcccagtctctggtggagaggccgtcctaaacgga
cacagcatacggacggagatgagcgaggtgcaccagaacatgggctactgtccccagttt
gacgccctggatgacctgctcaccggacgggaacatctggagttttacggcaggttgcgg
ggagtgccagaacccgaggtcgcaatggtggcagagtggggaatccagaagttggggctc
gtcaaatattccaacaaatcagcagggacctacagcggtgggaacaaacgcaagctctcc
acggccatcgccctgatcggctgtcctccagtcatcttcctggatgagccgactactggg
atggatcccaaggcccgccgcttcttgtgggactgcatcctgagtgtcatcagagaggga
cgctcagtcattctcacttcacacagtatggaggagtgcgaggccctgtgcactcgcatg
gccatcatggtaaacggtcgcttcaagtgtcttggcagcatccagcatctgaagagcaga
tttggagatggctacacggtgatcgtgagggtgggcggctctcctccggccctgaagccc
gtcgaggactttgtcctgcagaccttctcgggcagcgtcctgaaggagaagcatcacaac
acgctgcagtaccagctgccgtacacacagggagcactggcctccatcttcagccagttc
accatccaccagcagaggcttggtgtggaggactactctgtgtcacagaccactctagat
caggtgtttgtgaattttgcgaggcaccagcacgtcgaggaggaggctcagggctacgac
aacccggtggacacctcagacgagaagccactgtcgtctcggaagatctcccaagaagca
gagaaggtgtaa
DBGET
integrated database retrieval system
