Pleuronectes platessa (European plaice): 128430398
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Entry
128430398 CDS
T09923
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128430398 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128430398 (dhx15)
03009 Ribosome biogenesis [BR:
pplt03009
]
128430398 (dhx15)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128430398 (dhx15)
Spliceosome [BR:
pplt03041
]
Complex A
U2 snRNP components
U2 related factors
128430398 (dhx15)
Complex B
128430398 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128430398 (dhx15)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
90S particles
Helicases
128430398 (dhx15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
WHD_HA2
Helicase_C
AAA_19
AAA_22
SRP54
AAA_29
Cas3-like_C_2
Flavi_DEAD
nSTAND_NTPase5
AAA_25
AAA_23
AAA_30
Motif
Other DBs
NCBI-GeneID:
128430398
NCBI-ProteinID:
XP_053272417
LinkDB
All DBs
Position
23:complement(8055213..8079644)
Genome browser
AA seq
736 aa
AA seq
DB search
MRRGYDRDRDDRSKERPRDRERDRDRDRDVKSSGVHNIPTALSGGFLKPNPVQQQINPFT
NLPHTPRYYEILKKRLQLPVWDYRETFSNIMLRNQSFVLVGETGSGKTTQIPQWCVDMVR
STGGPKRAVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTVLKYMTDG
MLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRPDLKVIVMSATLDAGK
FQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEVDEGDLLLFLTGQ
EEIDEACKRIKREVEDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPNKPSGAIGRKVVV
STNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTCPG
KCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRA
LELLNYLAALNNDGDLTELGSMMAEFPLDPQLAKMVIASCEFNCSNEILSITAMLSVPQC
FVRPTEARKVADESKMRFAHIDGDHMTLLNVYHAFKQNHDATQWCYDNFVNYRSLMSADN
VRQQLSRIMDRFNLPRRSTEFNSRDYYTNIRRALVTGFFMQIAHLERTGHYLTVKDNQVV
QLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDVKPEWLVKVAPQYYEMSNFPQCEAKRQ
LERIVAKLSTKEYSQY
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtggctacgacagagaccgcgatgatcgatcgaaagagaggccccgtgaccgg
gagcgtgaccgtgaccgggacagggacgtgaagtcgtctggggtgcacaacatcccgact
gcactcagtggaggctttcttaagccaaaccccgtacagcagcaaatcaacccattcacc
aacctgccccacacgccacgctactatgagatcctcaagaagcggctgcagctgcctgtc
tgggactacagagagaccttcagtaacatcatgctgcggaaccagtcctttgtgctggtg
ggagagacgggctctggaaagaccacacagattccccagtggtgtgttgacatggtgcgc
tccacggggggaccaaagagagcggtggcctgcacccagcccaggcgggttgcggccatg
agcgtcgctcagagggtggctgatgagatggatgtcatgctgggccaagaggtcggctat
tccatcaggtttgaggactgcagctctgccaagactgtactcaagtatatgacagatgga
atgttgctgcgggaagccatgaacgatcccctgctggagcgctacggtgtcatcatcctg
gacgaagcccacgaacgcacattagctacagacatcctcatgggggtcctcaaggaggtg
gtccgccagaggcctgacctcaaggtcattgtcatgagcgccacactcgacgctggcaag
ttccaggtgtactttgacagctgcccactgctgaccatccctggacgcacccaccccgtg
gaaattttctacacaccggaaccagagcgcgactacctagaggcggccatccggactgtg
atccagatccacatgtgtgaggtggatgagggggacctactgcttttcctcactggacaa
gaggaaattgatgaagcctgcaagcgaatcaagagagaagttgaggacctggggccggaa
gttggcgatatcaaaatcatccccttgtactccactctgcctccacagcagcaacagagg
atcttcgagccacccccacccaataaaccaagcggtgcaatcggaaggaaggtcgtcgtg
tcaacaaacatcgcagagacgtcccttaccattgacggcgtggtgtttgtaattgatcct
ggatttgccaagcaaaaggtgtataacccaagaatccgagtggagtcgcttttggtgacg
gccatcagcaaggcctcagcccagcagagggccgggcgcgctggaaggacgtgcccagga
aagtgtttccgcctttacactgagaaagcctacaagacagaaatgcaggacaacacatat
ccagagatcctgaggtcgaacctgggctctgtggtgctgcagctgaagaagctgggtatt
gatgacctggtgcacttcgacttcatggacccaccagccccagagaccctgatgcgagcc
ctggagttgctgaactacctggcggcgctcaacaacgatggcgacctgacggagttgggc
tccatgatggcagagttccccctggacccccagctcgccaaaatggtcatcgccagctgt
gaattcaactgttccaacgagatcctctccatcactgccatgttgtcagtcccacagtgc
ttcgtccgacccacggaggctaggaaggtggccgacgagtccaagatgcgcttcgcccac
atcgacggagaccacatgacgctgctcaacgtctaccacgccttcaaacaaaaccacgac
gccactcagtggtgctacgacaactttgtcaactaccgctcgctgatgtcggcagacaac
gtgcggcagcagttgtccaggatcatggaccgcttcaatctgccgcgacggagcaccgag
ttcaacagcagagactactacaccaacatccgccgagcactggtcactggcttcttcatg
cagatcgctcacctggagcgcactggccattacctcacggtgaaggacaaccaggtcgtt
cagctgcacccctccaccgtgctggaccacaagcccgagtgggtgctctacaatgagttt
gtgctcaccaccaagaattacatccgcacgtgcacggacgtcaaaccagagtggttggtg
aaagtcgccccgcagtactacgagatgagcaacttcccccagtgtgaagcaaagagacag
ttggagcgaatcgtcgcaaaactctccaccaaggaatactctcagtactaa
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integrated database retrieval system
