Pleuronectes platessa (European plaice): 128430772 Help Entry 128430772         CDS       T09923                                  Name (RefSeq) collagen alpha-1(XVIII) chain   KO K06823   collagen type XVIII alpha Organism pplt  Pleuronectes platessa (European plaice) Brite KEGG Orthology (KO) [BR:pplt00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pplt04147]     128430772    00535 Proteoglycans [BR:pplt00535]     128430772    00536 Glycosaminoglycan binding proteins [BR:pplt00536]     128430772 Exosome [BR:pplt04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    128430772 Proteoglycans [BR:pplt00535]  Extracellular matrix (ECM) proteoglycans   Basement membrane proteoglycans    128430772 Glycosaminoglycan binding proteins [BR:pplt00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128430772 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Endostatin Collagen Collagen_trimer Fz DUF1554 Motif Other DBs NCBI-GeneID:  128430772 NCBI-ProteinID:  XP_053272792 LinkDB All DBs Position 24:5825904..5846555 Genome browser AA seq 1686 aa AA seqDB search MWRIQTWLLVTVLCAGSLEAWFWNPKPVTTPEFPTGTTAVTGATVTPSGMVTKKVAEVVE EEEEEDDNLSGVGEDIINVATVIRQLVAARDGTPTTTTSNAGLTEKVASVTPNMTGNTDG LRGERGEEGSGVGAGDGSGSGSASTDDLETDLESVSTGDKVLPRNSTGDVLKVNGTLGGA LESEPTPAASRIQSCLPVPSDWPVCSGKQPKFFTLPNFFNHTSVEEVGAALQEWAWLARA GCHHGTEWFLCLLLAPRCPSPRAPSLLPCRSFCHVLRDSCWASLKDGRLPVECYLLPERA EEPSCVSVSNWKEESGVSLLQLIGDPPPSEIARVYGPRGEAAYAFSAATVSGQPARTHVP NPFYRHFSLLFHIKPTTPAAAVLFSIIDGPQKLMYVGVKLSAVKAGRQRVQFFYTEPDSE ASYEAAAFDVPSMVDTWSRFSLSVFEEQVTFYHGCDSEQRVVRFERSPDPMEFDTGAGIF VGHAGGADTDKFQGEIAELKVVGSPRAAERLCDDEDDSDVASGDYGSGDGERRQTGHGAR TTTAPSRPVPQPPLISSKGTGLKESGPSGGRGEKGDRGEKGSTGDRGPSGPKGDSGSSSG SGVSSQGGGRGEKGDKGSKGSSGFGYPGNKGERGAQGPAGPAGPAGPAAEVVRLGDGSVV QQMAGPAGPPGQPGSDGASGPPGADGENGDPGEDGKAGPAGPPGFPGSPGTAGAKGQKGD LGEGQPGPRGSPGPPGPPGPGTGDRPTFVDMEGSGFQDRAARGPPGRPGLPGPPGIPGTS VALGSNGPVAFGPPGPPGQDGVPGLPGPAGRPGTPGQPGLRGEKGECERLGHSGGTGEKQ DKQDSTFFTGLFSYFNPSPTGSTGDPGHNGVPGESGLAGLPGPMGPVGPAGPPGPPGPPY RGGLIGGYEMTEGLPGLAGPPGPQGPSGIAGLPGKPGLPGSHGDKGAEGARGQPGMPGID GFKGQAGEKGDRGWKGEIGLPGRDGGQPGPPGPPGPPGQVVSGTTRDYNDLYWDEGWQGG AGTPGRAGFPGPVGPKGDKGDSGPPGYAPQGQKGEPGIIMGPDGTPMYLGGLGGQPGDRG PPGPVGPAGPYGSEGQKGEIGLPGRPGRPGLNGVKGESGSGSGYGQPGSPGAPGPPGPPG PPAPIDRLGGHVDYSRHYPALKGEKGDPGTGGVLQIPGLGSNYDIYSLKNELKGDRGNDG FKGEKGEPGGGYYDPRYGASGHGSPGAPGPPGPQGDSIVGPPGPEGPAGQPGRGYDGPPG PPGPPGPSLSETHRGTQTINIPGPPGPPGVPGLPGHTSGVTVLRSYDTMTATARRQPEGS LVYILDQTDLYLRVRDGVRQVQLGDYIPLPREDGNEVAAVEPPPVVPYSPDHHSNTDSHR HTDRHPQPEEPHVTHTDPRYVPNPDPRYTTRPDPRYQPDPRYQPDPRYQPDQRYQPDPQY QPDPQYQPDPRYPQPADPRYPSYTDRQSHPDGRYSVNTAHERPAYPDGRYPVTPQRRPHP PVVQTPVHHHTSGPGLHLIALNSPQTGSMRGIRGADFMCFTQAQAIGMKGTFRAFLSARL QDLHSIVRRADRDRMPIVNLKDEVLFDNWDGIFNDGRMKDNVPIYSFDGKDVLSDNTWPE KMMWHGSTSTGQQHVDGFCETWRVGDRALNGMASSLQSGNLLQPSSSSCSSSYVVLCIEN SSISKR NT seq 5061 nt NT seq  +upstreamnt  +downstreamnt atgtggaggatccagacgtggctgcttgtcacggtcctctgcgctgggagcctggaagcc tggttttggaacccaaaaccagttaccaccccagaattcccaacggggacgacggcagtg acaggtgccaccgtgacacccagtggcatggtgacgaagaaggtggcggaggtggtggag gaggaggaggaggaggatgacaacctgtccggggttggggaagacatcatcaacgtggcc acggtaatccgtcagcttgtcgcggcgcgggacgggaccccgaccaccacgacttctaac gcgggcctcacagagaaggtggcgagcgtgaccccgaacatgacgggtaatacagacggg ctcagaggggagaggggggaggaggggtctggggtgggggcaggggatggatctggctca ggatcagcgtccacagatgatcttgagacagatctagagtcggtctcgacaggtgataaa gtcctgcctcgcaattcaaccggtgatgttttaaaagtgaacggaactctcgggggtgca ctggagtcagagccgacccccgccgctagtcgcatccaatcgtgtctccccgttccctcc gattggcccgtttgctcgggcaaacagccaaagtttttcacgctgcccaacttcttcaac cacacgtctgtggaagaggtgggggcggcgctgcaggagtgggcgtggctggcgagggcg gggtgtcaccacggcacagagtggttcctctgccttctgctggcccccaggtgcccttcg ccccgcgccccctcgctcctgccctgccgcagcttctgccacgtcctgcgggacagctgc tgggcgtccctgaaggacgggcgtctcccggtggagtgttacctcctgcctgaaagggca gaggagccctcatgcgtgtcagttagtaactggaaagaagagagtggtgtctccttgctc cagctgataggagaccctccacccagtgagattgcccgggtctacgggccgagaggggag gccgcctatgccttctccgccgcgacggtgtcgggccagccggctcggacccacgtcccc aacccattctaccgccacttctccctccttttccacatcaagcccaccactcccgccgcc gccgtcctcttctccatcatcgacgggccccagaagctcatgtacgttggcgtcaagctc agcgccgtgaaggccggccgccagagggtgcagttcttctacaccgagcccgactcggag gcttcgtacgaggcggccgccttcgacgtccccagcatggtggacacctggagccgcttc tcgctgtccgtcttcgaggagcaggtgaccttctaccacggctgcgactcggagcagcgg gtggtgaggtttgagcgttccccggaccccatggagtttgacaccggggcggggatcttc gtgggtcatgcgggaggagccgacaccgacaaattccagggggagatcgccgagctgaaa gtagtcggaagccctcgggctgctgagcgcttgtgtgacgacgaggacgactctgacgtg gcctctggggactacggcagtggcgatggcgagaggagacaaacgggacacggtgccagg accaccactgcaccctcccgtccggtacctcagccgccgctgatttcctcaaagggaacc ggactgaaggaatcaggtcccagtggtggtcgaggtgagaaaggagacagaggagagaaa ggctctacgggggacagaggcccctcagggccgaagggagattcggggtccagctctggc tctggtgtctcctctcagggtggaggaagaggagagaagggggacaaaggttcaaagggc agttctggcttcggataccccggcaataaaggagagcgcggggctcagggaccagccggc cccgctggtcctgccggccctgcggctgaggtggtccgactcggggacggctctgttgtg cagcagatggccggacccgccggacctccggggcagcccgggtcggatggagcctcagga cctccaggagccgacggggagaatggggatccaggagaggatggaaaagctggtcctgct gggccaccaggtttcccaggaagtccaggaactgctggtgccaaaggccaaaagggtgac cttggagagggtcagccaggacccagaggatcccctggtccaccaggaccccctggacct ggcactggtgatcgcccaacgtttgttgacatggagggttcaggattccaagacagggcg gcccgtggtcctcctggtcgccccggtcttcctggccctcccgggatccctggtacttca gtagcactgggatccaatggtcccgtagccttcggacccccgggaccaccgggacaagat ggagtccctggtctgcccggccccgctggacgtcctggtactcctggtcagcctggactc agaggggagaagggtgaatgtgagcggctcggtcattcaggaggaactggtgaaaagcaa gacaaacaggactccacctttttcacgggcctcttctcttactttaatccatcccctacg ggttctacgggcgatcccggacacaatggtgtaccaggggagtctgggcttgcagggctt ccaggtcccatgggaccagttggacctgcagggcctcccgggccaccgggcccaccttac cgtggcggacttattggcggatacgagatgactgagggcttacctggactcgcaggccca cccggaccacagggtccaagtggtattgcaggtctacccggtaagccaggtctacccggc agccacggagacaaaggagcagaaggagcacgaggacaacctgggatgccaggcattgac ggattcaaagggcaggcgggtgaaaagggagatcgaggatggaaaggcgagattggtctg ccaggacgcgacggtggacaacccggacctccagggcctcccgggcctccaggacaggtt gtctccggaacaacaagagattataacgacctatattgggacgaagggtggcagggagga gctggtactccaggccgagcaggattcccggggcccgtgggaccaaaaggagataaagga gattcaggtcctccaggatatgcacctcagggacagaaaggcgagcctggcatcatcatg gggcccgatgggaccccaatgtacctgggtggcctgggaggacagccgggtgatagagga ccccctggccctgttggacctgcaggcccatatggttctgagggccagaagggagagatt gggcttccaggacgaccggggcggcctgggctgaatggcgtcaaaggcgaatcaggcagt ggatctggatatggacagcctggttctccaggtgcaccaggccctcctggacctcccgga cctccagctcccatcgacagacttggaggacacgttgattactccagacactacccagct cttaaaggagagaaaggagatcctggaacaggaggggttctgcaaattccaggtctcggg tccaactacgacatttactctttaaagaatgagttgaaaggggacaggggcaatgatggc ttcaaaggagagaaaggagaaccaggaggaggatattatgacccccgctatggagccagt ggacacggcagcccaggagctcctggacctccaggccctcagggtgactccatcgttggc ccaccaggtcctgagggtccagcgggtcaaccaggaagaggctacgatgggccgcctgga ccgcctggacccccaggaccttctctatctgaaacccacaggggcacacagacgatcaat attcctggccccccgggaccacctggagtgcctggactacctggtcacacgtctggggtg acggtgttgaggtcttacgacaccatgacagccacagctcgaagacaacctgagggctcg ctggtttacattctagaccaaacagatctgtacctacgggtccgcgatggagttcgacaa gtccagctcggggactatattcctttgcccagagaggatggtaatgaggttgcagcggtg gagcccccacccgtcgtcccctactccccggatcaccactccaacaccgactcccacaga cacactgaccgtcacccacagcctgaggagccccatgtgacgcacacagaccctcggtac gtgccgaaccctgaccccagatacacaacccgccctgacccgcggtaccagccagatccg cggtatcagccagatccgcggtatcagccagatcagcggtatcagccagatccgcagtat cagccagatccgcagtatcagccagatccccggtacccgcagccggcagatccaagatat ccaagttacacagaccgacaaagccacccggatggtagatattctgtcaatacggcccat gaacgccctgcgtacccagacggtcgctaccccgtcacccctcagcgcagacctcatcct cctgtggtccagaccccagtccaccatcacacttcaggtccagggctccacctgatcgcc ctgaacagcccccagaccggctccatgagggggatccgcggagcagacttcatgtgcttc acccaggctcaggccatcgggatgaagggaaccttccgggccttcctgtccgccaggctc caggatctccacagcatcgtccgcagggcagacagggaccgcatgccaatcgtgaacctg aaggatgaggttctgtttgacaactgggatggaatcttcaatgatggccgcatgaaggac aacgtgccgatctactccttcgatggcaaggatgtcctcagcgacaacacatggccagag aagatgatgtggcacgggtcgaccagcaccggtcagcagcacgtcgacggcttctgcgag acgtggcgagtgggcgaccgggctttgaacggcatggcgtcctcgctgcagagcggcaac ctgctccagccgagctccagcagctgctccagctcctacgtggtgctgtgcatcgagaac agctccatctctaagagataa

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