Pleuronectes platessa (European plaice): 128430795
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Entry
128430795 CDS
T09923
Symbol
trim25l
Name
(RefSeq) tripartite motif-containing protein 16
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128430795 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128430795 (trim25l)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128430795 (trim25l)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128430795 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
HisKA
Tweety
U-box
IFT57
DUF948
MutS_III
COG6_N
DUF4363
NusB
Motif
Other DBs
NCBI-GeneID:
128430795
NCBI-ProteinID:
XP_053272821
LinkDB
All DBs
Position
24:3131857..3139089
Genome browser
AA seq
827 aa
AA seq
DB search
MSGKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMTCIKDYWSKDDPNGTYSCPQCRKAFS
PKPTLSRNTMLAEAVEQLRKGASKSDVRESIRKARRASSSSTKPKGKLSSSAVTCDMCKG
DRRAAVKSCLVCMSSYCEAHLKPHQTKKALKQHELIAPTGNLAEKICTQHKYLQEFFCRQ
CKMFICWLCTSDLHKGHECVSTKAERLEKQKVISELQVGNQQRLRDREQELKDMKKIMEG
MKRSSDRVHDDTEQVLSELQRSMERLQELLEEVLDQASMEKMGQAQEVADSLEAEIMERK
RRDTDMKDLGRCEDHIHYLQAYESLISPLESGELPSLAVNPDASFEPVRDAILDLRERVE
DLCNQELGKITKQVNETTMFTLGDANQSSGAKAGLLKLFSGLGSRNTNSRSPASSSSVSV
GGRSTDRRGIGLGFQSQDVRSRNAPRDTGNTNSPRQRREERETVRETTPRPIPTPSPAPS
HRASQSLGSRFSQNQAPSPTPSPTPSRKESRSTGIRSSQNQVAHAASPTPTPAPASSGGF
SRMASISSLFRSGRRGIQQATPATSAIPFTNTPSAGGNPWGMDALSETPTEINPGLFLDT
PTPETMNHAPVFPLLREISIDSIQAPEPRSREEFLQYSVNLTLDPNTAHRRLALSEGNTK
AILQVAGQPYPDTPQRFDGWTQVMCQSPLYGQHCYWEVEWRGRGSSVGVAYGALNRKGSD
ARSGLGYNAQSWTLELSDTCCSAMHANEKRDIPVTYSPRLGIFLDLSMGTLAFHSVAESM
THLHTFRANFTQPLYAAFGVGSGVGVGLDFALGKFTSSSDSIKICPM
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaagctgtggacagaggagcagtttaactgccctgtgtgtctggatctcccc
aacgatccagtcaccatcccctgtgggcacagctactgcatgacctgcatcaaggattac
tggagcaaggacgaccccaatgggacctacagctgcccccagtgccgcaaggccttcagc
cccaagcccaccctctccaggaacaccatgctggcagaagctgtggagcaacttcggaag
ggggccagcaaatctgatgtgagggagtctatccgtaaagcccgcagggcgtcctcctcc
tccaccaaacccaaagggaagctctcctcctcagcagtgacctgcgacatgtgcaaaggg
gatcggcgcgcagcggtcaagagctgcctggtgtgcatgagctcctactgtgaagcccac
ctgaagccccaccagaccaagaaggccctgaagcagcatgagctcatcgcacccacgggc
aatctggccgagaagatctgcacgcagcacaagtacctgcaggagttcttctgtcgccag
tgcaagatgttcatctgctggctctgcaccagcgacctgcacaagggccacgagtgtgtg
tccaccaaggccgagcgcttggagaaacagaaagtgatctccgagctgcaggtggggaat
cagcagagactgagagacagagagcaggagctcaaagacatgaagaagatcatggagggg
atgaagcgttcctcagacagggtacatgatgacacggagcaggtgctgtcggagctgcag
cgctccatggagcgtctgcaggagctcctggaggaggtgctggaccaggccagcatggag
aagatgggccaggcccaggaggtggccgacagtctggaggctgagatcatggagcggaag
aggagggacacagacatgaaggacctggggcgctgcgaggaccacattcactacctgcag
gcgtacgagtccctgatcagccccttggagtcgggcgagcttcccagcttggcggtcaat
ccagacgcttcctttgagcctgtgcgagacgccatcctggacctcagggagcgagtggag
gacctgtgcaaccaggagctgggcaagatcaccaaacaggttaatgaaacaacaatgttc
accttgggagacgccaatcagagctcaggagccaaagccgggttattaaaattgttttct
ggtctgggatcccgcaacacaaacagccgttcaccagcttcatcatccagtgtgtcagtt
ggaggtcggagtacagacagaagaggaattggtttaggcttccagagtcaggatgtgagg
agcagaaacgcaccacgagacacaggaaacacaaactcccccagacagaggagagaggag
agggagacagtgagggagacaacccccagacccatcccgactcccagcccagctcccagc
cacagagcgtcccagtccctcgggagcagattcagtcagaaccaggcacccagtccgact
cccagtccgactcccagccgcaaagagtcccggtccactgggatcaggtccagtcagaac
caggttgctcatgctgcgtctccgactccgactccagctcctgcatcgtctggaggtttc
agtcggatggcgtcgatcagcagcctcttccgctccggccggcggggcatccaacaggcc
acccctgctacctcagcaatccccttcaccaacacaccatctgcaggaggaaacccatgg
ggaatggacgctctgtctgaaacaccaacagaaattaaccctggtctcttcttggacacg
cccacccctgaaaccatgaatcatgctcctgttttccctttattgagagaaatcagcatc
gacagcatccaggccccagagccgagatccagagaggagttcctccagtactctgtgaac
ttgacccttgaccccaacacagcccaccgccgactggctctctccgagggcaacaccaaa
gccatcctgcaggttgcggggcagccctaccccgacacaccacagcgttttgacggctgg
acccaggtgatgtgccagagcccgctgtacggccagcactgttactgggaggtggagtgg
agaggccgcggctcctctgtgggcgtggcttacggagccttgaacaggaagggctcagat
gccagatctggccttgggtacaacgcccagtcctggaccctggagctctcagacacctgc
tgctcagccatgcacgccaatgagaagagggacataccggtcacctactccccccgtctg
ggcatcttcctggacctgtccatggggacgttggcttttcacagtgtggcagagagcatg
acacaccttcacaccttccgcgccaacttcacgcagcccctctatgccgccttcggggtg
gggagcggtgtcggggtgggtctggactttgccctcggcaagtttacctcaagcagtgac
agcattaagatctgtcccatgtga
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