Pleuronectes platessa (European plaice): 128431335
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Entry
128431335 CDS
T09923
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pplt03037
]
128431335 (rp1l1a)
04812 Cytoskeleton proteins [BR:
pplt04812
]
128431335 (rp1l1a)
Cilium and associated proteins [BR:
pplt03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128431335 (rp1l1a)
Cytoskeleton proteins [BR:
pplt04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
128431335 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
DUF7406
Motif
Other DBs
NCBI-GeneID:
128431335
NCBI-ProteinID:
XP_053273593
LinkDB
All DBs
Position
24:complement(3545173..3553707)
Genome browser
AA seq
2470 aa
AA seq
DB search
MHSVQVGMWDPRAPSKHDSPLASPPPSDVRLAHVTTDCPAKRITFYKSGDSQFGGVRMAV
HKRSFKCFDALLDDLSQKVPLPFGVRTVTTPRGTNTIQHLEQLQDGGCYLCSDRRQAKPI
NMELASKRPSIWSHHNRRPQRPESSSATPPNHQPYRQRRILLVKNSEPGTRRSVVLSRRS
TRSLGAFLDEVSEVMQFHVRKLYTAEGRKIDTVQSLMTCPPVLVCVGREAFSPVLANFIK
KNSEEKLPGLDSRSPGLSPRTPGNGARSPAVQGARSPPHGAQSRASEYSEGHESKKNVNF
GLETKKSIIHPRSDSSNRSNHFSMSSEKSYGNGVSSYSQARPAIMNDDIEKRVLVNKDGS
LSVEMRVRFRLHNDETVHWSTQIKKSPSLTNDCCPLSQVQPHYLHNGQSESCSDPDSMSF
DPEVVDYSSQPVQHALEANHCPCCYQRPEQHYDLWENPAHSRKQPLVPPPHPLTSSHTRR
RHTNSSSSSSSCNSRRVVHRRAQLSSCGGGSGSEQSQLIQEEMCVTEQVEHTVEVEQDGD
KHVEVCRVSRCHSRSEVVTRDSNHRPLSSKSGEEEVMIEEEQERPQSAVSCSSNVLQSLE
EDQDEEEEDLPPSASRCHHSNEPSPSPSSKISTVKKHKDGEERASSAVSAASSCCCGSVT
QLPAAEAEEMDRAPSSKSKASRASCRSGRTGLSTGSRKSGASTVCPDCGGCKQGATSNPG
SPQHKQENGSSESNDDTSEDSVGSTQSNKSNLTNCGRNSAESNVLECRASSVASSASTPE
VKEEERAPSAISATSHRSNRSHRSGNNGVTGITVDKEEERSLSNMSARSRKSKTPDTRTR
EEVVGERAISSLSVKSGVSAKTITSVKSHKSNCPSKSNAASPTEDTAVEEEKTRKKSPSS
LSERPHSALSAKSNVTAQSSTSHRSACSRCAKVKSPGAGEATRQEEGTDGQNRTASAMSV
KSNLSVKSNNSHKSTKASERSLSPRSEAQGEERPASQTSARSVKSTNGSVKSSKSRKSNC
EENETEVSPSSKLEEEPEETEGEMVEEETQHEPDRAASARSTMSNKNTGDAKERTASVLS
GKSALSEKSHHSKTDVDRSPSAASGKSRKSKCSAASPHGDEQQTETEERVASAMSVKSKS
SARSNVKSASPGPNAVTINSAEEVEDEGNETTERAPSAASAKSRKSHVSSNHSGRKAPAA
PGSRQSSARQLVPGPGLGETRGPSALSVRSATSAKSGRSKCRCGAASGEDQKEGNDEEAT
EQAASFLSSSSKRQRRDSGGTEQPLSRCSSGSVSLGLPEDQEAADSDSGKSCFSFCTNTE
SKGRVKTAASEGPKSQTGSAAKKDVEGRASRNKSTLSHNPPAVDIPTIKTPGGGDGRDEE
DGGGQNAERAASAISTKSGRSQKSSRSRSAKVTENNLQTESESKTRNLSAHNNRTSSSMS
SSSANVAKTPVGDSSSNDTGNISEVKGQEDVAASVHSKSPFCLRPESAASAQSGSKTKVR
SVKGRESRSKAGSNSGDVETLVKSSDPCPLHDSRPSSKVESETTLSHSLSAADLLKETMA
ACPDRPESKASKTSDRTGGEKSPKSQRKRNQKEKKPDLTPACLPNASPNEVVNNWLRSIP
ANSGMLALGDELEEGEQEAEEKPGEEEVAQVGESPEDDKVEDEEKAEVEEGAEKEGEAKC
DTAEEEQNSDPAPGDEKVASCPTGLESADSLPRNLHPSVAVMKVLLSSSLGRCRSLPEVS
PVYGRRLSTSARGFLDCLAQLQLIEPALRPGCDLQKNPNHQYDEIMTILQSLWLTGPSDT
EFKKGKDIGKEQVTPPRSSSGVGMSSGSGGSGKENGNKDGHETPPKEIESLPEVQVPSED
QSTLPQSLDSPKATENPSSSDKSSANDSSKSPTDNEQEPLDDTSSGTPSTVLRAPLSQKL
SQDPDPVWVLHLLKKVEKQFINHYINAMAEFKVRWDLDDSLILDTMMSELKEEVSRRIQS
SIEREIRKIKGRAGRGGRSPRPPQGAHLSRESTMTEKRRRILKVMKNQSVKTTDSVSDEE
MEGDFSDQRSDDEYCPCDACVRKKMDARPLMVNPLAANAPVKMEFDLLKILQLKKSPEPA
PVAVHQSAELEGEEGRNLEVVQEEEEEEEEEEETKEDIKAEFVLEDMIPEEDEEEEEEKV
EKEENSEEGKEQEEGEKEGEETGEEGAQGNDDEEEEGEAECQCQCARNEEESDKAEEEEE
AEETGDNTGEDEVEDDEDETGTGEEESDLETVKEAPVGKGETTEGQEEEEEEEECEASDS
KPVEEETTGKESGEEEAEDEDDGENGGGEEESHEEGEGGESEEQEGPPPQDQGATEGEEA
DAEDSDTDKKSPSDTSADEVVAGTTGDEEEKEAGGGDAVEEFKPEEEEEEEEVKGSRKEA
GALLHQFTRTSVESQPGSLEDIHTDSAPVSTIEVPKMGSTGGGASPKRSRSPGRVKCRKP
KDRDMDQDDY
NT seq
7413 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagtccaggtagggatgtgggacccccgggccccgtcaaaacatgactcaccc
ctcgcctcacctcccccctccgacgtgcgcctcgcccacgtgaccacagactgcccggcg
aagcggatcaccttctacaaaagcggcgacagccagttcgggggcgtcaggatggccgtc
cacaagcgcagcttcaaatgcttcgatgccctgctggacgacctttcccaaaaggtgccc
cttccgtttggtgtgcggactgtaaccactccccgtggcaccaacaccatccaacacctc
gagcagctccaggacggcggctgctacctgtgctctgaccggcgccaggctaagccaatc
aacatggagctggcaagcaaacgcccaagcatctggtcccatcacaaccgcagaccccag
cggcccgagagctcgtctgcgacaccacccaaccatcagccctacaggcagcggcggatc
ctgctggtgaagaacagcgagccgggcacgaggaggagcgtggtgctgagcaggaggtcg
accaggagcctcggggcgttcctggatgaagtgtcagaggtgatgcagtttcacgttcgc
aagctctacactgcagagggacgcaagatcgacaccgtgcagagcttgatgacctgcccc
cccgtgttggtgtgcgtcggccgggaagcgttcagtcccgtgttggccaacttcatcaag
aagaactcggaggaaaagctgcctggtctggacagcaggtcgcccggtctcagccccagg
actccgggaaacggggccagatctcctgccgttcagggagccagatccccgcctcatgga
gctcagtccagagccagcgagtacagcgaaggacatgagagcaagaaaaatgtgaacttt
ggtctggaaaccaagaagagcatcatccaccctcgttctgactcctcaaaccgctccaac
catttctcgatgtcttcagagaagtcgtacgggaacggcgtcagctcctactcccaggcc
cgaccggcgattatgaacgatgacatcgaaaagcgtgtgcttgtgaataaagacggtagc
ctctcagtcgagatgagggtccgctttcgcctccacaacgatgagaccgtccactggtcc
acgcagataaaaaaatccccatctctgaccaatgactgttgtcccctgagccaggtccag
ccccactacctgcacaatggccaatcggaaagctgctccgatcctgattccatgtcattc
gacccggaggtggtggattactccagccaacctgtgcagcatgcattggaagcaaaccac
tgcccctgctgttaccagcgaccggagcagcactacgacttgtgggagaatccagcacac
agccgcaaacagcctctcgtcccacccccacatccactcacgtccagccacaccagaagg
agacacacaaactcctcgagctcgtcttcttcctgtaattccaggagagtggtgcaccgt
cgagctcagctctccagctgcggaggcggctcaggctcagagcagagccagctgatccag
gaggagatgtgtgtgacggagcaggttgaacacacagtagaggtggagcaggacggagac
aaacacgttgaggtgtgcagggtgagccggtgccacagccgcagcgaagtcgttaccaga
gacagcaaccatcgacctctcagcagcaagtcaggggaggaagaggtgatgatcgaggaa
gagcaggagcgtccacagtctgcagtcagctgctcctcaaatgtcctgcagtcattagag
gaggatcaggatgaggaggaggaggacctgccacccagcgcctcacggtgccatcacagc
aatgaaccatcaccatctccatcaagcaaaatctcaacagttaaaaagcacaaggacggg
gaagagagagcgagcagtgcagtgtctgcagcttcttcctgttgctgtggatctgtcacg
caacttccagcagctgaagcagaggagatggatcgcgcccccagctccaagtccaaagcg
agcagagcttcttgcaggtctggtcgcacaggactttcaaccggctctaggaaatcaggg
gcatcgactgtgtgccctgactgtggcggctgcaaacaaggagccacttcaaaccctggt
tcaccgcaacacaagcaggagaacggctccagcgaaagtaatgatgacacctcggaggat
tcagtcgggtcaacacaatccaacaagtccaacctcaccaactgtggccgcaattctgca
gaatcaaacgtcttggagtgcagagcatctagtgtcgcgtccagtgcatccactcctgaa
gtaaaagaagaagaaagggctccgagtgccatctcagcaaccagccacaggtccaatagg
tcacacaggtctggtaataatggggtcactggtatcacagtggacaaagaggaggagagg
agcctcagcaacatgtctgccaggtccaggaagtctaaaacacctgacacgagaacaaga
gaggaagtcgtgggagagagagcaatcagctcgttgtcggtcaaatcaggtgtttcggca
aagaccatcacttcagtcaaatctcacaagtccaactgtccctcaaaaagtaacgctgcc
tccccaactgaagatacagccgtcgaagaggagaagacacgcaaaaagtctccaagtagc
ctttctgagagaccccatagtgccctgtcagcaaaatcaaatgtgacagcacagtcgagc
acttctcacaggtccgcgtgcagccgctgtgctaaagttaaatctccaggtgctggggaa
gcaacaagacaggaagaagggacagacgggcagaacagaacagcgagtgccatgtcagtc
aagtctaatctgtcagtcaagtctaataattcccataagtccaccaaagcttcagagagg
tcactttcgcccaggtcggaggctcagggagaggaaaggccagcaagtcaaacgtctgcc
agatcagtcaaatcaacaaatggttctgtaaagtcctcaaagtcacgcaagtctaactgc
gaagaaaatgaaactgaggtatctccgagctcaaagttagaagaggaacccgaggagaca
gaaggtgagatggtggaagaagaaacacaacatgagccagacagagcagccagcgcccgg
tccacaatgtccaataagaatacaggagatgctaaagagcggactgccagtgttttatct
ggtaaatcagctctatctgagaagtcccaccattcaaagacagacgtggacagaagtcct
agtgccgcgtctgggaagtccaggaagtccaagtgctctgcagcttctccacatggagac
gagcagcaaactgaaaccgaagagcgggttgccagtgccatgtctgtcaagtccaaatcg
tcagcacggtccaatgtcaagtcggcgtcaccgggtccaaatgccgttaccatcaactcg
gcagaggaggttgaggacgaaggaaatgagacgacagagagagctccaagcgctgcatca
gctaaatctagaaaatctcatgtttcatccaatcatagtggacgtaaagctccagccgca
cccggcagtcgtcaatcctctgcacgacagttggtgcctggccccggtttgggggagacg
agaggtccgagtgctttgtcagttcggtccgcaacctcggctaaatctggccggtccaaa
tgtcgctgtggagcagcttcaggggaggatcagaaggagggaaatgatgaggaggctact
gaacaggctgcaagcttcttatcatcctcttccaagagacagaggagggattcaggaggc
accgagcagccgttgagtcgatgctcatcaggctcagtctctctcgggttgcccgaagac
caagaagcagctgattcagacagtgggaagtcatgtttttccttttgcacaaacactgag
agtaaaggccgagtgaagacggcagcatctgagggtcctaaaagccagacgggctctgct
gcaaagaaagatgtggaaggaagagcgtccaggaataaaagcactttgtcccacaatcct
ccagctgtcgatatccccacgataaaaactcctggaggcggtgatggtcgagatgaagaa
gacggtggagggcaaaacgcagaaagagcagccagtgcaatttctaccaaaagcggcaga
tcccaaaagtcctcacgtagccgtagcgccaaagtgacagaaaataaccttcaaacggaa
agtgagtcaaaaactagaaatctgagcgcccacaacaacagaacctcgtcttcaatgtca
tcatcaagtgccaatgtagcaaagaccccagttggagattcatcaagtaatgacactgga
aacatcagtgaggtcaaagggcaagaagacgttgcagccagtgtccactccaagagtccg
ttttgcctcaggcctgaatcagcagcttcggctcaatctgggtccaaaaccaaagtcaga
tcagtcaaaggccgtgagtccagatctaaagcaggaagcaacagtggcgacgtggagaca
cttgtcaaatcctcggacccctgtcccctgcatgactccagaccaagcagcaaagtggag
agtgagaccactctgtctcactctctgtccgctgccgacctgctgaaggaaaccatggct
gcgtgtccggacagaccagagtcgaaggccagcaaaaccagtgaccgaacggggggagag
aaaagcccaaagagtcagagaaaaaggaaccagaaggagaaaaagcccgacctcacacct
gcctgtctgcccaacgcttcccccaacgaggtggtgaacaactggctgcggagcattcct
gccaacagcggtatgctggcactgggcgacgagctagaagagggggagcaggaggcggag
gagaaacctggagaggaggaggtggcacaggtgggggagagtcctgaagacgataaagtg
gaggacgaggagaaggctgaggttgaggagggagcagagaaagagggagaagctaaatgt
gacacggcagaggaggagcagaattcagatccagctccgggtgatgagaaggtggcgtct
tgccccactgggctggaaagtgctgactctctgcccaggaatttgcatccgtctgtggct
gtgatgaaggttcttctgagttcttctctgggccgatgccgaagtttgccagaggtgtct
ccagtttatggccgtcgactgagcacgtcagccagagggttcctggattgtttggcccag
ctccagctcatcgagccggcacttagacccggttgtgacctgcagaaaaaccctaaccac
cagtatgacgagatcatgaccatactccagtcgctctggctcactgggcccagtgacact
gagttcaagaagggcaaggacatcggcaaggagcaggtgactccaccgaggtcctcatcc
ggggtgggaatgagcagtggctccggcgggtcgggaaaggagaatggaaataaagatgga
cacgaaacacctccgaaggagattgaatctttacccgaggtgcaggtgccgagtgaagat
caaagtacactccctcaaagtctggacagcccgaaagccacagagaacccgtcatcctcg
gacaagagctctgccaacgacagctccaagtcccccaccgacaacgagcaggagccgctg
gacgacaccagctcaggaacaccctcgactgtcctgcgagcgcctctgtcccaaaaactg
tcccaagaccccgatcccgtttgggtgctgcaccttctgaagaaggtggagaaacagttc
ataaaccactacatcaacgccatggcggagttcaaagtccgctgggacctggacgacagc
ctcatcctggacacgatgatgtctgagctcaaggaggaggtgagtcgacgcatccagagc
agcatcgaacgcgagataaggaagattaagggccgagccggcagaggaggacggtcgccc
cggccaccccagggagcgcacctctccagggagtccaccatgacagagaagaggcgtcgg
attttaaaggtcatgaagaaccaatcggtgaaaaccactgactctgtcagtgatgaagag
atggagggtgatttcagtgaccagcgaagtgatgatgagtactgcccctgcgatgcttgt
gtccgcaagaaaatggatgcccggcctctcatggtgaacccattggcagccaacgcacca
gtgaagatggagtttgaccttctcaagatacttcagctgaagaaaagcccagagcctgcg
cctgtagccgtgcaccagtctgcggagctggaaggtgaggaggggaggaatttggaagta
gtgcaggaggaagaggaggaggaggaggaggaggaggaaacaaaggaggatattaaagcg
gagtttgttttagaggatatgatcccagaggaggatgaggaagaagaagaggagaaggta
gaaaaggaggaaaatagtgaggagggtaaggagcaggaagagggagaaaaagaaggtgag
gaaacaggagaagagggggcacaaggaaatgatgatgaggaggaagagggtgaggcagaa
tgtcaatgtcagtgtgccagaaatgaggaggagagtgacaaggctgaagaggaagaggag
gctgaggagactggcgacaacacaggggaagatgaggtggaagatgatgaggacgagaca
ggaactggggaggaggagagtgacctggagacagttaaagaagcaccagtaggtaaagga
gagaccactgagggtcaggaggaggaggaagaggaggaggagtgtgaggcgtctgattct
aagccagtggaagaggaaaccacaggaaaggaaagtggagaagaggaggcagaggatgaa
gatgacggggagaatgggggcggagaggaggagtcgcacgaagagggagagggaggagaa
agtgaggagcaggaaggaccccccccacaggaccagggggcgactgagggagaggaggcc
gacgctgaagactcagacacagacaaaaaaagccccagcgacaccagtgcggatgaagtt
gttgctgggaccactggtgacgaggaagagaaagaggcgggaggaggagacgccgtggag
gagttcaagcccgaggaagaggaggaggaggaggaagtgaaaggcagcagaaaggaggcg
ggggctctcctccatcagttcaccaggacgtctgtggagtcgcagcccggctccttggag
gacattcacacggattcagctcctgtcagcaccatagaagtgcccaagatggggtccact
ggggggggtgcgagcccgaagaggagccggtcgccggggagggtcaaatgtcgcaaaccc
aaagacagagatatggaccaggatgattattaa
DBGET
integrated database retrieval system
