Pleuronectes platessa (European plaice): 128431417
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Entry
128431417 CDS
T09923
Symbol
lrba
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128431417 (lrba)
Membrane trafficking [BR:
pplt04131
]
Endosome - Lysosome transport
Others
Others
128431417 (lrba)
Endosome - Golgi transport
128431417 (lrba)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
128431417 (lrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
WD40
Laminin_G_3
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
SUKH_6
Motif
Other DBs
NCBI-GeneID:
128431417
NCBI-ProteinID:
XP_053273603
LinkDB
All DBs
Position
3:8526297..8702273
Genome browser
AA seq
2929 aa
AA seq
DB search
MASEEAAGAAQPGDGNDGRPGAGQLNPAVPIRGIRMKFAVLAGLVEVGEVSNRDIVETVF
NLLVGGQFDLEMNFIIQEPDSILCMVELLDKCEPTCQAEVWSIFTAILKKSVRNLQACTD
VGLIQQVLERISTTDSMIADLLVDMLGVLASYSITVKELKLFFSKLQGQEGQWPRHAVKL
LSVLKYMAHRNGPDSFFSFPGKNAAAIALPPIAKWPYQNGFTFHTWLRMDPLNNINVDKD
KPYLYCFRTSKGLGYSAHFVGGCLIVTSLKTKGKGFQHCVKYDFKPQKWYMVTLVYIYNR
WKNSELSCYVNGELASFGDIAWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFGEA
LSAAQILAIYQLGPGYQGTFKYKAESDLLFAEHHKTLLYDGKLSSSIAFTYNPRATDAQL
CLESSPKDNASIFVHSPHALMLQDVKAVVTHSVQSGIHSIGGVQVLFPLFAQLDYRQPSS
HELDTSVGCTLLSFVMELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRPVLDIVLA
FSRYLSNLQNGILLLKQLCDHILFNPVIWIHAPAKVQLTHYTYLATEFISTVTIYNAIRR
VGTVLQVMHTLKYYYWVVNPQDRSGVIPKGLDGPRPNLKEILSLRAFLLLFVKQLIMKDH
GVKDDELQSILNYLLTMHEDDNIMDVLQLLVALMSEHPGSMVQAFDQRNGIRVVYKLVAS
KSEGIRVQALKVMGYFLKHLPPKRKSEVMLSHGLFSLLTERLMLHCSQFSMTTYNVLFEI
LTEQICTQVIHKQHPDPDSTVKILNPQILKVIAALLKNCPLSPESMEVRRLFLSDMIKLF
NNSRENRRSLLQCSVWQEWMISLCFINPRNTEEQKITEMVYAIFRILLYHAIKYEWGGWR
VWVDTLSITHSKVTFEQHKENLSRMFRQYQHQESLGSVRTISGVSQSSENMEGVNGSSAE
ETAPNTVIELRVDELSQKSPESASSSTITSSPQETAGERGQASITVSNILARSESAEGPR
RDHSGDGIETKATVTPTTAAEEQSEETNKQEAATETSPDEDVDHLQASVSDSSETLDTKA
AEVTGDSATAPACDDAQTPTEGEKCESEPKEGESPKTATEDSLNEVDTEPPVVSVEEVET
DQATPQTAAGQETSNEDQVDVSSVSDQIQPIVDESQQETSNASAAAEEGEASKKEEDAHA
DDEGNKSDQEGKEVTTEEEKEEPLKVSDEDKPVESKTEGKPDLESPTPPVETPGQNVTEP
PKEKVEDAQTETPTSDQLPSDTTLPPAAQEGAEQSDPASPSQPSETSGGEETASSALESS
STPPAAASASPDTQKSSDTVSKTKEIKIARLDVSNVALDTERLELKDTSITETSQGQSTT
ATASAGSSSSQPREGGASAPRSTMFRIPEFRWSHMHQRLLTDLLFSIETEVQMWRSHSTK
TILDFVNSSENVVFVHNSIHLISQVVDNLVMACGGILPLLSAATSSSHELENIEPSQGLT
LEASVTFLQRLINLVDVLIFASSLNFTEIEAEKNMSSGGLLRQCLRLVCAMAVRNCLECQ
QAQFKQGSEGPVRSGSQSTGPGASAQSPVDAVTGGMSPIRDLDRLLQDMDINRLRAVVFR
DIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDRKHPQRSQSARSTDGVSGGLEVEN
GVSLRRYDSGIGDDHTSTAASEADLSSSGMTHGPDAISEALSTLSSEVRPAPPSDSKGKN
VKDILRSLVSAPSDDIMVDPSLLPPSFLGSVSDLARKSSLQTHSFDRSVVVAPKKAGMAP
SPSSSTPVPAATAASVSAGTPIDRVAVVSAGDASESISADSAASGGQVPASASLPSVPPL
SPVTQNTAPNMSISERLESALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLMC
MKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFIL
SRQRAEDIHKHAEFESNCAQYAAEKRDEEKMCDHLIRAAKYRDHVTATQLIQKIVNILTD
KHGAWGNSSISRPREFWRLDYWEDDLRRRRRFIRNPFGSNHSEATLKAAAEHAPEEDILK
GKQSIRSHALGHQNSESETSLDGDDDTLSSLDEKDLENLAGSVNLSTGAQLVAPAAVVKG
TLSITASELYFEVEEDEPSFKAIDPKILAYTEGLHGKWLFTEIRAIFSRRYLLQNTALEI
FMANRTAVMLNFPDAATVKKVVHSLPRVGVGTNFGLPQTRRISLATPKQLFKASNMTQRW
QRREISNFEYLIFLNTISGRTFNDLNQYPVFPWVITNYDSEELDLTLPSNFRDLSKPIGA
LNPKRAAFFSDRYESWEDDQVPKFHYGTHYSTSSFTMMWLLRMEPFTTFFLNFQGGKFDH
ADRTFSSVARAWRNCQRDTSDVKELIPEFYYLPEMFVNSNSYNLGVMEEGSVVSDVELPP
WAKSPEEFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEATRALNVFYYLTYEGAVNL
NSFNDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVTPLMFTEQMQQDVIMVLKFP
SNSPVTHVAANTQPGLTSPAIITVTANRLFAVNKWHGLAGHQSSTVQDQQYQLPVEIDPL
IASNVGSHRRQISDLLDQSIQISSQCFIITADNRFILLCGFWDKSFRVYSTDSGKLTQIV
FGHRDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIGESLGTEFTTPRAILT
GHDCEVTCASVCAELGVVISGCKEGPCLIHSMNGDLLRTLEVPERCTRPRLIQSSTEGHC
MVYYDKGQFCLFSVNGKLLGHMEVEDSIKAMLLSRDGQYLLTGGDGGIVSVWQVHNLKQL
FSYPGCDAGIRSMAISHDQRCIITGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8790 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaggaggcggcgggcgctgctcagccgggggatggcaatgacgggagaccg
ggcgccgggcagctcaaccccgcggtgcccatccgggggatcaggatgaaattcgccgtg
ctcgccggcctggtggaagttggggaagtttccaaccgggacatcgtggagaccgtgttc
aacctgctggtcggcggccagtttgacctggagatgaacttcatcatccaggagccggac
agcatcctgtgcatggtggagctgctggataagtgtgagcccacctgtcaggccgaggtc
tggagcatcttcaccgccatcctcaagaagagcgtccgcaacctgcaggcgtgcaccgat
gtggggctcatccagcaggtgctcgagcggatatccaccacagacagcatgatcgcagac
ctcctcgtggacatgctgggcgtcctcgccagctacagcatcacggtgaaggagctgaag
ctgttcttcagcaagctgcaggggcaggaaggccagtggcctcgtcacgcagtgaagctt
ctgtcggtgctgaagtacatggctcacagaaatggtcccgactccttcttcagcttccca
ggaaagaatgcagctgccatagctctgcctcccattgcaaaatggccgtaccagaatggg
ttcacattccacacgtggctccgcatggatcctctcaacaacatcaacgtagacaaagac
aagccttacctctactgtttccgcaccagtaaaggcctcggttactctgcacactttgtg
ggcggctgtttgatagtgacctcattaaaaaccaaggggaaaggattccagcactgtgta
aaatacgacttcaaaccacagaagtggtacatggtgactcttgtttacatctacaaccgc
tggaaaaacagtgagctcagctgctacgtgaacggagaactggcttcctttggagacatc
gcctggttcgtcaacaccagtgacacgtttgacaagtgtttcctgggatcgtcggagacg
gcggatgccaaccgtgtgttctgtggacagatgggggcagtttacctgtttggagaggct
ctcagcgctgctcagatcctggccatttatcagctggggcccggctaccagggcacattc
aagtacaaggccgagagcgacctgctgtttgcggagcatcataagaccttactgtacgac
ggcaagctgtcctccagcatcgccttcacgtacaaccctcgcgccacagatgctcagctc
tgcctcgagtcctcccccaaggacaacgcctccattttcgtccattcaccccatgcactc
atgctgcaggacgtgaaggctgtggtgactcactcagtccagagcggcatccactctatc
ggaggcgtgcaggtcctcttccctctgtttgcacagctggattatcgccagccctccagc
catgagctggacacctccgtcggctgcacgttgctgtcctttgtgatggagctcttgaag
aactcggtggctatgcaagagcaggtcctggcctgcaagggcttcctcgtgattggctac
actttggagaagtcctccaaggtgcatgtgacgcggcccgtcctggacatcgtgctggcc
ttctccagataccttagcaacttgcagaacggcatcttgctgctgaagcagctgtgtgac
cacatcctgttcaaccctgtcatctggatccatgcccctgccaaggtgcaactgacccac
tacacttacctggcgacggagttcatcagcacagtgaccatctacaacgccattcgcagg
gtgggcacggtgctgcaggtcatgcatacactgaaatactactactgggtcgtcaaccca
caggaccgcagcggggtcatccccaaaggcctcgacggtccgaggccaaacctcaaggag
atcctgtctctgcgagctttcttgttgttgtttgtcaaacagctcataatgaaggatcat
ggagtcaaagacgacgagctgcagagtatcctcaactacctccttaccatgcatgaggat
gataacatcatggatgtgctgcagttgttggtggctctgatgtctgaacatccagggtcc
atggtccaggccttcgaccagcgcaatgggattcgtgtggtttacaagcttgtggcctca
aaaagtgaaggaattcgagtgcaggcactcaaagtgatgggctactttctgaagcacttg
ccaccaaagaggaaatctgaggtcatgctgagtcacggcctcttctccctgctcactgaa
cggctgatgctgcactgcagccagttcagcatgacgacctacaacgttctcttcgagatc
ctcaccgagcagatctgcactcaagtgatccataaacagcatccggaccccgactccact
gtgaagatcctcaacccacagattctcaaggtaatagctgctctactgaagaactgtcct
ctgtctcctgagagcatggaggtgcgccggctcttcctgtcagacatgatcaaactgttc
aataacagccgagagaaccgcaggagcctgctgcagtgctcggtgtggcaggagtggatg
atctccctgtgcttcatcaacccgaggaacacagaggagcagaaaataacggagatggtg
tacgccatcttccgcatcctgctttaccacgccatcaaatatgagtggggtggctggcgc
gtctgggtggacaccctgtccatcacccactccaaggtgacctttgaacagcacaaggag
aacttgtctcgcatgttccgtcagtaccagcatcaggagtctcttggctcggtccggacc
atctccggtgtcagccagagctctgagaacatggaaggcgttaacgggtcgtcggcagag
gagacagcccccaacaccgtcattgagctcagagtggacgagctgtcccagaagtcccct
gaatcagcatccagttccaccatcacctccagcccacaggagaccgctggtgaaaggggg
caagcatccatcacagtgtcaaacatcctggcgaggtctgagtcggctgagggacctcgc
agagaccactcgggtgatggaatagagacaaaagctaccgtgacaccgacaacggctgca
gaggaacagagcgaagagaccaataagcaggaagcagcgactgagacgtcccctgacgag
gacgtggatcatctacaagcatccgtcagtgactcgtctgaaacgctggacacaaaagca
gcggaagtgaccggagactctgctacagctcctgcgtgtgatgatgcacaaacaccgaca
gagggcgaaaaatgcgagagcgaacccaaagaaggagaatcgccaaagaccgcaacggaa
gactctttaaatgaagtggacacggaaccaccagtggtttcagtagaagaagttgagacc
gaccaggcaacccctcagactgcagccggtcaggagaccagcaatgaggaccaggtcgat
gtttcatccgttagcgaccagatccaacccattgttgacgaaagccaacaggagacttct
aatgcttctgctgctgcagaggaaggggaagcatcgaagaaggaggaagatgcacatgcg
gatgatgaagggaataaaagtgaccaggaaggaaaggaggtaacaacggaagaagagaaa
gaagagccgctgaaggttagtgatgaagacaaacctgtagagagcaaaactgaagggaaa
cctgatttggagagtccgactcctccggtggaaacacccggacagaatgtgacagaacca
cccaaagaaaaggttgaagatgcacagactgaaaccccaacttcagaccagctgccctca
gacaccacactgccccctgcagctcaggagggtgcagaacagtcagaccctgcctcacct
agccagccttcagagaccagcgggggagaggaaaccgcttccagcgccctggagagcagc
agcaccccccccgccgccgcctccgccagccctgacacccagaagagctcagacaccgtc
agcaagaccaaagagatcaagatcgcccgactggacgtgtccaatgtggccttagacact
gagagacttgaactgaaggacacctccataacagagacaagccaaggccagtcgaccaca
gcaacggcatcagcaggaagttcttccagtcaaccgagggagggcggcgcctcggccccg
cgctccaccatgtttcgcatcccagagttccgatggtcccacatgcaccagcgcctcctc
accgacctgctgttctccatcgagacggaggtccagatgtggaggagtcactccacgaag
acgatcctggacttcgtgaacagcagtgagaacgtggtgtttgtccacaacagcatacac
ctcatctcccaggtggtggacaacctggtgatggcgtgcggaggcatcttgcctctgctc
tctgctgccacctcctcctctcatgagctggagaacattgaaccttcccaaggcctgacg
ctggaggcctccgtcaccttcctgcagcgcctcatcaacctcgtggacgtgctcatcttc
gccagctccctcaacttcacggagatcgaagcagagaagaacatgtcgtccggaggtctc
cttcgacagtgccttcgcctcgtgtgtgcaatggcagtgagaaactgtctggagtgtcag
caggcccagttcaagcaaggctccgaaggcccagtccgcagcggctcgcagagcactggg
cccggagcgtctgcccagagtcctgttgatgcagtgacaggtggaatgtctccaatcaga
gatctggaccggctgctccaggacatggacatcaaccgcctccgggccgtcgtcttcagg
gatattgaggacagtaagcaggcccagtttctggctctggccgtggtgtacttcatctcg
gtcctcatggtgtccaagtaccgggacatcctggagccgcacaatgataggaaacatccc
cagagatcccagtctgccaggagcacagacggcgtctctggtggactggaggtagagaat
ggcgtctccctccggcggtacgactccggcatcggcgacgaccacacctcgaccgcggcg
agcgaggccgacctgtcgtcctccggcatgacccacggccccgacgccatctccgaggcc
ttgtccacgctgtcgtccgaggtccgacccgctccgccctcggattcgaagggcaagaat
gtgaaggacatcctgcgcagcctcgtgagcgccccgtccgacgacatcatggtggacccg
agtctgctgccaccgtcgtttctggggagtgtgagcgatttggccagaaagtcctcactg
cagacccactcctttgatagaagtgttgtcgtcgcacccaagaaagccggcatggcgcct
tctcccagcagctccacccccgtcccagcagccaccgctgcctcggtgtcggccgggacg
cccattgaccgtgtcgctgtggtatctgccggcgatgcctctgagagcatctctgcagac
tctgcagcttcaggcggccaggttccagccagcgctagcctgccatctgtccccccactc
tcccctgtgacccagaacacagcccccaatatgagtatctcggagcgtctggagagcgct
ctggagaaggcggctcctctgctgagagagatcttcgtggactttgcccccttcctctct
cggaccctgctgggcagccacggacaggagctcctgattgagggcacgagtctgatgtgt
atgaagtccagcagctcagtagtggagctcgtcatgcttctgtgttcacaggaatggcag
aactccatccagaagaacgcaggcctcgccttcatcgagctggtcaacgaaggcagactg
ctgagtcacaccatgaaggaccacctggtgcgtgtggctaatgaagctgaattcatcctg
agccgacagagagctgaagacatccacaagcatgctgagtttgagtccaactgtgctcag
tacgcagccgagaagcgagatgaggagaagatgtgtgaccacctgatccgggcggccaag
taccgcgaccacgtgacggccacgcagctcatccagaagatagtcaacatcctgactgac
aagcacggagcctggggaaactcttccatcagccggccgagggagttctggcgcctggac
tactgggaggacgatttaaggcggcgtcgtcgcttcatcaggaaccccttcggatccaac
cactcggaggcgaccctcaaagccgccgccgagcatgcgcccgaggaggatattctcaaa
ggcaagcagtccatcaggagtcacgctctgggacatcagaactcagagagtgagacgtcc
ctcgacggggacgatgacactctgtccagcctggacgagaaggacctggagaatttagca
ggctcagtaaacttgagcaccggcgctcagctggtggctccggccgcggtggtgaaaggc
accctgtccatcaccgcctccgagctctacttcgaggtggaggaggacgagccgagcttc
aaggccatcgatcctaagattctggcctacacagaaggccttcatgggaaatggctcttc
acagagatccgggctatcttttccagacgctacctacttcaaaatactgcactggaaatc
ttcatggccaacagaactgcagtcatgctcaacttcccggatgctgccaccgtgaagaag
gtggtccacagtcttcctcgtgttggggtgggcacgaacttcggccttccccagaccagg
cgaatctccctggcgaccccgaagcagcttttcaaagcgtccaacatgacccagcgctgg
caacggcgggagatctccaactttgagtacctcatcttcctcaacaccatctccggtcgc
accttcaatgacttgaaccagtacccggtcttcccgtgggttatcaccaactatgactca
gaagaacttgacctcacgctgcccagcaacttcagagatctgtctaagcccatcggtgca
ctgaatcccaaacgggcggccttcttctcagacagatacgagtcctgggaggatgatcag
gtgccaaagttccactatggcacccactactccacctccagcttcaccatgatgtggctg
ctacgtatggaacccttcaccactttcttcctcaacttccaaggaggaaagttcgaccac
gccgatcgcaccttctcatctgtggcgcgggcctggaggaactgccagagggacacatct
gacgttaaggagctgatcccagagttctactacctccccgagatgtttgtcaactccaac
agctacaacctgggagtgatggaggaaggcagcgtggtctctgacgtggagctgccgccc
tgggccaagagtccagaggagtttgtccgaatcaatcgcctggctctggagagcgagttc
gtgtcctgccagctccaccagtggatcgatctgatcttcggctacaagcagcagggcccc
gaagccacaagggccctgaatgtgttctactatctgacctatgagggcgcagtcaacctc
aactccttcaacgaccccatgctcagagaggctgtggagtctcaaattaggagttttgga
cagaccccctgccagttgctcatcgagccacacccacccagaagctcagccatgcaagtg
acgccgctgatgttcacggagcagatgcagcaggacgttatcatggtgttgaagttcccg
tccaactcgcccgtgacccacgtggcggccaacacgcagccgggcctgacgtcgcccgcc
atcatcactgtcaccgccaaccgcctctttgcagtcaacaagtggcacggcctggcaggt
catcagagctcgacggtgcaggaccagcagtaccaacttcctgtggagattgacccgctc
atagccagtaacgtgggcagtcaccggcgtcagatctcagacctgctggaccagagcatc
cagatcagctcccagtgtttcatcatcacggccgacaaccgcttcatcctcctgtgtggc
ttctgggacaagagcttcagggtctactccaccgactcaggcaaactgactcagatcgtg
ttcgggcaccgggacgtggtgacgtgtctggctcgctccgagtcctacatcgggggggac
tgctacgtgctgtcgggctcacgggacgccaccctgctgctgtggtactggaacggaaag
cacagcagcatcggagagagcctcggcacagagttcaccacaccccgggccatcctgacg
ggccacgactgtgaggtgacgtgtgccagcgtgtgtgcggagctgggcgtcgtcatcagc
ggctgcaaagagggcccttgtctgatccattccatgaatggggacctgctgaggaccctg
gaggtcccggagcgttgcacgcggccccgcctcatccagtcctccaccgagggacactgc
atggtctactacgacaaggggcagttctgtctcttcagtgtcaacggcaaactgctggga
cacatggaggtagaggacagcatcaaggccatgctcctcagtcgagacggccagtacctg
ctgacaggcggagacggggggatcgtttctgtctggcaggttcacaacctcaagcagctg
ttctcgtacccgggctgtgacgcagggatccgctccatggccatttcacacgaccaaagg
tgcatcatcactgggatggcgtcggggagcatcgtgctcttctacaacgacttcaaccgg
tggcaccacgagtaccagacccggtactga
DBGET
integrated database retrieval system
