Pleuronectes platessa (European plaice): 128436525
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Entry
128436525 CDS
T09923
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pplt03009
]
128436525 (ddx21)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128436525 (ddx21)
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128436525 (ddx21)
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
Pre-60S particles
Helicases
128436525 (ddx21)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
128436525 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128436525
NCBI-ProteinID:
XP_053274237
LinkDB
All DBs
Position
1:15954299..15963566
Genome browser
AA seq
752 aa
AA seq
DB search
MPSKIVFDTEDLVQEAEMDTVSEAKALKIKNKEAKKLKKKQQTEEQEEQEDPDCEPPALK
KKKKKDKLAGHEVNGHDEVTDLNDNINGIETPKKKKTKTNTEGDTEKKIKQKKATVEAAT
NGHSTLNTPVQTPLPSGEESASDNEKDTETQEQKDGAFSNFKISDFTINKLKARGVTYLF
DIQVKTFNPVFDGEDVIAQARTGTGKTFSFAIPLVEKIQRDSLPPTRGRAPKVLVLTPTR
ELAIQVARDFKDVANKLSIVCFYGGSSYNPQIDAIRNGIDVLVGTPGRIKDHLQNSKLDL
SKVKHVILDEVDQMLDMGFAEQVEEILATSYEKDGEANPQTLLFSATCPAWVYQVAKKYM
RPECKHVDLIGKKTQKAATTVEHLAIACHWSQRAAVIGDVIQVYSGRHGRSIVFTETKKE
ANELSMNASIKQSTQTLHGDIPQKQREITLKGFRNGTFEVLVATNVASRGLDIPEIDLVV
QCSPPKDVESYIHRSGRTGRAGRLGVCICFYQRKEEDQLRYVENKAGITFKRVGVPTSND
IIKSSSKDAVKFLDSVPVTAIGYFRASAEKLIEEKGAVDALAAALAHISGATSLEQRSLL
NSDSGFTTMQMVCSQEMHNLGYAWRSIKEQLGEDFENHIQRMCFLKGKTGVCFDIPVDKV
KQMQEGWKDGRRWQLSAAEELPDLEEKQHNNRGDGGFGNGNRGDRRGGGGFRGGRGRSFG
GGGGQRNGFRNGGGVGAGRGTHKRNFSEAFDY
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaagatcgtatttgacaccgaggatctggtccaggaggcggagatggacacc
gtcagtgaggcgaaagcactgaagatcaagaacaaggaagccaagaagttgaagaagaag
cagcagacggaggaacaagaggagcaggaggacccagactgtgaacctccagcactaaag
aagaaaaagaagaaagacaagctggcaggtcatgaagtgaacggccatgatgaggtcaca
gaccttaatgacaacattaacggtattgaaacaccaaagaagaagaagactaagacgaac
actgaaggagacacagagaaaaaaattaagcaaaagaaagcaaccgtagaggcagcaacc
aatggacattccaccctgaacacccctgttcagacaccgttaccatcgggtgaagagtca
gccagtgacaacgagaaagatacggaaacacaagagcagaaggatggggccttttccaac
ttcaagatctccgactttaccatcaataaactgaaagcccggggagtcacctacctgttt
gacattcaggtgaagacatttaatccagtgtttgatggagaagatgtaatcgctcaagct
cgaacaggaacaggaaagaccttctcctttgccatcccattggtggagaagatccagagg
gattcattgccgccgaccagaggccgagctcccaaggtcctggtgctgactccaaccaga
gagttagcaatccaggtcgctagggacttcaaagacgtcgccaacaaactttccatcgtc
tgtttctacggcggcagctcatacaacccacagattgatgccatccgtaatggtattgat
gttttggttggaacccctggtcgtatcaaagaccacctccagaacagcaagcttgacctg
tccaaggtgaagcacgtcattctggatgaagtcgaccaaatgttggacatgggatttgca
gaacaggttgaagaaattttggctacatcatatgagaaagacggcgaagccaatccccag
acgctgctgttttcagccacctgccccgcctgggtctaccaagtggccaagaaatacatg
agaccagaatgcaaacatgttgacctaatcggcaagaaaactcagaaagctgcaacaact
gtggagcatcttgccatcgcctgtcactggtcacagcgcgcagccgtgatcggtgatgtc
atccaggtctacagtggcagacacggccggagcatcgtgttcacggagacaaagaaagag
gccaatgaactctccatgaacgcatccatcaaacaaagtacacagaccctccatggtgat
attcctcagaaacagagagagatcaccctgaagggcttcaggaatgggacctttgaggtt
ctggttgccaccaatgttgcatctcgtggattagatatccctgaaatcgacctggtggtc
cagtgctctccacccaaggatgtggagtcatacatccatcgttcaggacgtacaggccga
gcaggcaggcttggagtttgcatctgtttctaccagaggaaagaggaagaccagctgcgc
tacgtagaaaacaaagcgggtatcacattcaaacgagttggagttcccacttccaatgat
atcatcaagtcatcaagcaaggatgctgtcaagtttttggactcagttccggtcacagct
attggatactttagagcttcagctgagaagctgatcgaggagaaaggcgccgtcgatgca
ctcgctgctgcccttgcccacatctctggagccacaagtctggagcagaggtcactgctg
aactctgattctggtttcaccaccatgcagatggtgtgttctcaggagatgcataatctg
ggttatgcttggagaagcatcaaagaacaacttggcgaagactttgagaaccacattcaa
agaatgtgcttccttaaaggcaaaacgggagtttgtttcgatatcccagttgacaaagtc
aagcagatgcaggagggctggaaggacggtcgtcgttggcaactgtcagccgccgaggag
ctcccagacctggaggagaagcagcacaataaccgcggcgacggaggctttggcaatggt
aaccgtggcgacagaagaggcggaggaggcttcagaggcggaaggggacgcagcttcggg
ggaggtggcggccaacgcaacggattcaggaacggtggtggcgtcggcgccggcagagga
acacacaaacgcaacttcagcgaagcttttgattactga
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