Pleuronectes platessa (European plaice): 128436632
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Entry
128436632 CDS
T09923
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pplt03037
]
128436632 (cfap52)
Cilium and associated proteins [BR:
pplt03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
128436632 (cfap52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
WD40_like
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_Vps41
Kelch_6
WDR54
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
128436632
NCBI-ProteinID:
XP_053274397
LinkDB
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Position
3:complement(16878014..16889682)
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AA seq
619 aa
AA seq
DB search
MADKTQGVTPLELEAVIGFNGHVSSGLNVHPDKEHLIYPLGSTVILKSLTDGKQEFLHGH
TNNISCISVSKSGLYIASGQANFMGFEAPIIIWDYTQRTIHAELTLHKAKVEALAFSPND
KYLVSLGGQDDGRIFLWDIETKRFMCGSPASANSSGHTFTLQYSNTNDHVFVSAGNETLR
VWELNLTNRKITATECQAGKLRRMVKCVEISEDDEFIFCGTTSGDIMKINLNSRHLSSCG
PVKSKYSLGVSVLKILKSGDLLLGSGSGTITLCSSTNFKILKKVQVEKGVTSISLSGEDN
HFYVGTEAALMYRISYVDFEAELVSSSHTSAVKDVAIPSGTSELFGTCSEQDIKLWHIDN
PKELLCIAVPNKTCNALDFMANGQSIISAWDDGAIRVFGTESGRLMLIIDNAHKKGVTAI
AGTRSCKRIVSGGGDGKMRVWELQKQGHRLLETMTKHKGSVTCIQIKSDDSECVSVSTDG
SCIIWDLVRFMSLQMMATNTMCKAVCYHPEEHQIITSGTDRKVAYWDVYEGATIREVEGS
QSGPINAMHISQDGKHFVTGGEDKLVKVWDYMEGTVTHVGVAHGVTITSIKMCSNNRTLV
STSADGAVLRWRFPHPSSP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaacacaaggagtcactccacttgaactggaggctgtcattggcttcaat
ggacacgtgtcttctggcttgaacgttcacccagacaaagagcacctcatctatcctctg
ggatccacggtcattctgaagagtctcaccgatggcaagcaggagttcctccatggacac
acaaacaatatatcctgtatttcagtgtccaagagtggattgtatattgcctctggacag
gccaacttcatgggctttgaggctccaattattatctgggactatacacagcgaacgatc
catgccgagctgaccctccacaaggcgaaggtagaggcgctggccttctctccgaacgac
aagtacctggtgtccctcgggggtcaggatgatggccgcatattcctttgggatattgag
accaagcggttcatgtgtggaagcccagcctcagccaacagttctggtcacaccttcact
ctgcagtactcgaataccaacgaccatgtctttgtttcagctgggaacgaaacactgcga
gtctgggagctgaacctcaccaaccggaagatcacagccacagagtgtcaggcaggaaag
ctcaggaggatggtgaagtgtgtagagatctcagaggacgatgagttcattttctgtggc
actaccagtggagacataatgaaaatcaacctgaattcgaggcacctgagtagctgtggt
ccagttaaatcaaaatacagcctgggtgtcagtgtcctgaaaatactgaagtctggggac
ctacttctcggatctggatctggtaccatcactctgtgttctagtactaacttcaaaatt
ctcaagaaagttcaggtggaaaagggggtgacctccatttctttaagcggagaagacaac
catttctatgttgggacagaggctgctctgatgtaccgcatcagctacgtggacttcgaa
gctgaactcgtgtccagcagccacaccagtgctgtcaaggacgtagccattccttctgga
acctctgaattatttggaacctgctctgagcaggacatcaagctgtggcacattgacaac
cccaaagagctgctgtgcatagctgtacccaacaagacctgtaatgccctggacttcatg
gctaatggacaaagcatcattagtgcatgggacgatggtgcgattcgtgtgtttgggaca
gaaagcggtcggctcatgctcatcattgacaatgcacacaaaaagggggtgacagccatc
gctggcaccaggtcctgcaagaggatcgtcagtggagggggagatggaaagatgcgtgtg
tgggagctgcagaaacaaggccatcgactgctggagaccatgacaaagcacaaaggctct
gtgacttgtatccaaatcaagagcgacgacagtgagtgtgtctctgtcagcacggatggt
tcctgcatcatctgggaccttgtgcgattcatgagtcttcagatgatggccacgaacacg
atgtgtaaggcagtgtgctaccaccctgaggaacaccagatcattaccagtggcacggac
agaaaggttgcctactgggacgtgtacgaaggtgctaccataagggaagtggagggctcc
cagtctgggcccattaacgccatgcacatctcccaggacggcaaacactttgtgacgggt
ggagaagacaagctggtgaaggtgtgggactacatggaaggcacagtgacacacgtgggt
gtggctcatggtgtcactatcaccagcatcaagatgtgctccaacaaccgcaccttagtc
agcaccagtgcagacggagccgttctccgctggaggttccctcatccgtcttccccctaa
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