KEGG   Pleuronectes platessa (European plaice): 128436661
Entry
128436661         CDS       T09923                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pplt  Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pplt03041]
    128436661
Spliceosome [BR:pplt03041]
 Complex B
  Other components
   Complex B specific factors
    128436661
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th LisH_TPL Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_Vps41 Ge1_WD40 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_WDR75_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Cytochrom_D1 Beta-prop_VPS8 Mala_s_1-like Beta-prop_IP5PC_F TFIIIC_delta DUF7165 VPS8_N LisH
Other DBs
NCBI-GeneID: 128436661
NCBI-ProteinID: XP_053274436
LinkDB
Position
3:11730689..11736813
AA seq 520 aa
MALEMEPSDVIRLIMQYLKENNLYRTLTTLQEETTVSLNTVESIDSFMADVNRGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAARSLLRQTDPMIMLKQTQPERYVHLEDL
LSCSYFDPREAYPKGSSKEQRRRAIAEALAREVSVVPPSRLLGLLEQVGSLRLQQLPGQL
SPESPITTSGNKERHVVKESFPTQLYRHIKFGRRSHVECARFSPDGKYLITGSVDGFIEV
WNFYTGKISKDLKYQAQDSFMMMDDAVLCMCFSQDTDLLATGSQNGKIKVWKIQSGLCLR
RFEHAHSKGVTSLCFSRDSSQILSASFDQTIRIHELRSGKTLKELNGHSSFVNDASFTQD
GFHIVSASSDGTVKIWNPETSECVHTVKPLSQTSEVPVNSVTPLPQDPEHFVVCSHSSKV
VVLSMDGQTVKTFSSDRKDATDFVCCTLSPRGEWLYCVGEDLVLYCFNYMTGRLEKTLTV
HEKDVIGITHHPHENLIATYSEDGLLRLWMPSSHGRPTEP
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggccctggagatggagccctcggatgtgatccgcctgatcatgcagtacctcaaggag
aacaacctctaccggaccctgaccaccttacaggaggagaccaccgtctccctcaacacg
gtggagagcatcgacagtttcatggccgatgtgaaccgcggccactgggactcggtcctg
ttggccatcgagtccctgaagctgccggacaacacgctgatcgacctctacgagcaggtt
gtgatggagctgattgagatgagggaggtgggagcagctcgctcgctcctcagacaaacc
gaccccatgatcatgttgaagcagacccagccggagagatacgtccacctggaggacctg
ctgtcctgctcctacttcgaccctcgtgaggcgtacccgaaggggagcagcaaggagcag
cgacgcagggcgatagctgaggcgctggcgagggaggtgagcgtggtgcctccttctcgc
ctcctgggactcctggaacaagttggttcgctgagactacagcagcttccaggtcagctg
tccccagaaagccccatcaccacgtctggcaacaaggagagacatgtggtgaaagagagc
ttccctacgcagctgtaccggcacatcaagtttggacgacggtcacatgtggagtgtgcc
cgtttctctcctgatggaaagtacctgatcaccggatcggtggacgggttcattgaggtg
tggaacttctacactggaaaaattagtaaggacttaaagtaccaggcacaagacagcttc
atgatgatggatgatgctgtgctgtgtatgtgcttcagccaggacaccgatcttctggca
accggatctcagaatggcaaaataaaggtgtggaagatccagagcgggttgtgtctgcgc
aggttcgagcacgctcacagcaaaggtgtgaccagtctgtgcttctccagggacagcagc
cagatcctcagtgcctccttcgatcagaccatcagaatccatgaactgaggtcagggaag
acactgaaggagttaaatggccattcgtcgtttgtgaacgatgcatctttcactcaagat
ggattccacatcgtcagcgcctcatctgacggcaccgttaagatttggaacccggagacg
agcgaatgcgtccacactgtcaagcctctgtcccagacgtcggaggtccccgtcaacagc
gtgactcctcttccccaggacccagagcactttgtggtttgcagccactcaagcaaagtg
gtcgtgttgagcatggacggtcagaccgtgaagacgttcagctcagacaggaaggacgcc
acggactttgtgtgctgcaccctgtcgccccgcggggagtggctctactgtgtgggagag
gatctggtcctgtactgcttcaactatatgaccgggaggctggagaaaacgctgaccgtt
catgagaaagacgtcatcggcattactcaccatccacacgagaacctgatcgccacatac
agtgaggacggcctcctgaggctgtggatgccatcttcacatggacgacctacagagcca
tga

DBGET integrated database retrieval system