Pleuronectes platessa (European plaice): 128436673
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Entry
128436673 CDS
T09923
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128436673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pplt03041
]
128436673
03009 Ribosome biogenesis [BR:
pplt03009
]
128436673
Enzymes [BR:
pplt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128436673
Spliceosome [BR:
pplt03041
]
Complex A
U1 snRNP components
U1 related factors
128436673
Complex B
128436673
Ribosome biogenesis [BR:
pplt03009
]
Eukaryotic type
Pre-60S particles
Helicases
128436673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
128436673
NCBI-ProteinID:
XP_053274454
LinkDB
All DBs
Position
3:complement(17986824..17994263)
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AA seq
634 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGGGNRGGPPSGKFGNPGERLRKKHWNLDELPKFQK
NFYQEHPDVTRRPVQEVDLYRRTKEVTVKGRECPKPIMKFHEAAFPSYVMDVIAKQNWTE
PTSIQSQGWPVALGGKDMVGIAQTGSGKTLAYLLPAIVHIQHQAFLEHGDGPICLVLAPT
RELAQQVQQVAAEYGRASRLKTTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECSK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLKD
YVQINIGALQLSANHNILQIVDVCNDMEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDE
LTRRMRRDGWPGMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVINY
DYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLIAVLREANQAINPKLIQMAE
DRGGRGRGGRGGYKDDRRDRYGGGRSNFGGGSYRDRESDRGFGSGPKSTFGGGKAQNGGA
YGGNSGNSSGSYGNNNYSNSNGQGNFGNPANQVGAFGNQSFQGPPQFGAMQRAAQNGMNH
PPFPFNSQAPPPQAQQAAPPPPMMPYPMPPPFPQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggttttcagacagagatcgcggcagagatagagggtatggtgggggacctcct
cgttttggtggtggtggaggaggcaacagaggtggacctccttctggaaaatttggcaac
cctggtgagaggctgcggaagaagcactggaaccttgatgagcttcccaagtttcagaag
aacttctaccaggagcacccagatgtcacccgcagaccagttcaagaggttgacctgtac
cgaagaactaaagaagttacagtcaaaggcagagagtgccccaaaccaattatgaaattc
cacgaagctgcatttccaagctatgtcatggatgttatcgccaaacaaaactggactgaa
ccaacctctattcagtctcaggggtggccagttgctcttggtggcaaagacatggttggc
atcgctcagactggatctggaaaaacccttgcataccttctgcctgcaattgtgcacatc
cagcatcaggcattcttggagcatggagatggacctatttgcttagtgctggcaccaacc
cgtgagctggctcagcaggtgcaacaagtggctgctgaatacggccgggcctcccgtctc
aagaccacctgcatctacgggggtgcacccaaaggaccccagatcagggaccttgagagg
ggtgttgagatttgcatcgctaccccaggtcggctcattgacttcctggagtgtagtaag
actaatttgcgtcgttgcacctatctggtgctggatgaagctgaccgcatgctggacatg
ggatttgaacctcaaatccgcaagatagttgaacaaatccggccagaccgccagactctg
atgtggagtgccacctggcccaaggaagttcgccagctggctgaggacttcctgaaggat
tatgtccagattaatattggagctcttcagctcagtgctaatcacaacatcctgcagata
gttgatgtttgcaatgacatggagaaggaggacaaactgctccgtctgctggaggagatc
atgagtgaaaaggagaacaagaccatcatctttgtggagaccaaaaggcgttgtgatgag
ctcaccaggaggatgagacgagatggttggccaggaatgggaattcatggagacaagagc
cagcaggagagggactgggtccttaatgagttcagatatggcaaagctcccatcctcatt
gctacggatgtggcctcccgcggcctagatgtggaggatgtgaaatttgtcatcaattat
gactaccctaactcctccgaggattatatccaccgcattggacgcacagcccgcagtcaa
aaaacgggcacagcatacaccttcttcacccccaacaacatgaaacaagccagcgacctg
atcgctgtgctccgtgaggctaaccaggccattaaccccaagctgatccagatggcagag
gacagaggaggtcgtggaagggggggaagaggtggctacaaggatgaccgtcgcgatagg
tatgggggtgggaggagcaattttggcggtggaagctacagggatagggagagcgataga
gggtttggcagtgggccgaagagtaccttcggtggcggcaaggcccaaaatggtggtgct
tatggaggcaacagtggaaactctagtggcagctatggcaacaacaattatagcaacagc
aacggacagggtaatttcggtaatccggcaaaccaggtgggtgcctttggtaaccaaagc
tttcaggggccccctcagttcggggccatgcagagggctgctcagaatggaatgaaccac
ccgccattcccattcaactctcaggccccaccaccacaggcccagcaggctgcaccgcca
ccacccatgatgccctacccaatgccgccaccttttccacagtag
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