KEGG   Pleuronectes platessa (European plaice): 128436720
Entry
128436720         CDS       T09923                                 
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2
  KO
K10897  partner and localizer of BRCA2
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03440  Homologous recombination
pplt03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    128436720 (palb2)
   03460 Fanconi anemia pathway
    128436720 (palb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pplt03400]
    128436720 (palb2)
DNA repair and recombination proteins [BR:pplt03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     128436720 (palb2)
   FA (Fanconi anemia) pathway
    Downstream FA components
     128436720 (palb2)
SSDB
Motif
Pfam: PALB2_WD40
Other DBs
NCBI-GeneID: 128436720
NCBI-ProteinID: XP_053274535
LinkDB
Position
3:6297874..6305717
AA seq 1411 aa
MESRDVEEQLRTTLHCDDKEKLRRKLALLKREYLRTAQRLQRAERLEGVRRHVRSRISQE
NLQDQRDPEETSKQSLSPGRLNGADATTPDKVQCPGQSEGPSDSENLRRSQVIRFLLPSD
ADCPQTPDPIHDAVRGHRSSPALRLRSRRSRLLWERRSAEVCRITDDREEVQEQSDQLER
VGTIAGEEKIHSEEAVKIKSEESEVVNESEELFSSSESDSPSLLLTHWKTHAHTETGETE
GKEIREDDEQREKEDEATTDGTKESESTSLLLQCQNSAVQSEEKGRDRTLNGEREEAVSG
ENSRGQRETTRSVVNHHKNMEETTTGKIETEKMHDDIMEIKEEKNLLDSCTLVEGLLFPV
EYYVRTTRRMSSSQSQPDMQAVLLSQLSAGRPRRGRGRGRGSNRHTHTRECSDLNSQEDF
SSLTNASTDPPEISHVCTVDASAELSANSQRSSEISGKSQNGVDASYSPAVSATHPGAGR
RRRGRRRGRGRGRSQTPRSIKCLDIVQMETSEDPLPTLTPLSSSPPSPRAPDGLKPRLPP
QEPVLLSDDDRPVSTCHAGTQPPPGVNGAQCSPASRHLHRIYPMFLMNNTPSQSRGASSW
RSLLLPSSPLSQTSLFPLPSPSTGSLFNSLMTFDMHQDFHLPDDQFASLKLHKLRQVAVE
SGVELFTSPSYNTRSRLPRSYPCYSTSEPVVPLSLPLSLTPTVSMEETPACVDVQNLPTD
SKLVDESLAEDSSNPDKTEPPGEQQTEKHDAKTHTSSTETVSVAQESPAVCEDDSKKQDT
VDTHSRSNTHRSIDDSVKPQPYMNCADGPAGKVDGCVAEPSNELKIKQPASETDAYCSGE
VCSEEDQTSTNHRREDGAVIKTLCFECPPEESAEEASDSRPAAQTRDDSDSPVKHRTSEE
SSEPPTRPPRDRSGIRTSQKSSPHPRVHSQLLLSPPLTSASCPFAPPHLPSSALLSSPTL
PSLGLTPCPVSAGLPLTSSPSAPPLTLPPPHSPATHPLSPPALCPCPSITSLPPSRPLVS
RSSQDRASSQVAADRHPSVEPATLATASSFQARGRAGQEGERMEETAEQHVITHTLKAPA
GGCLVDTCCLPGPSGGLCVAAAGKWAVCLWSQTPASDWSLTHTWTFNYRVINVVPVPDAS
GLMFVTLGQLEIREVRVLSCSSLTQVLLCEGVVQVVVGVSGSRVVTSSHSATGSTLRVFN
VSDDNSVWSSQPLESPGVCVGALAPVDGLSDALIGTDEGGRVFVWNLKSGQLLRSIVLGD
GLSHTACLRGYSHCGVLFVLLQHQLLSSPEEGGMEAKAKDELFSEEDRKKTALFSLVAVN
PLTGKSTLATRLFPPKAWSGRLCEADVNRSSVVGLSQSGCVCVWELGRPGASRMVWAPES
EGWQLARWGGPDMLVTGHHKGDVTVHCYSKT
NT seq 4236 nt   +upstreamnt  +downstreamnt
atggagagtcgtgatgtggaggagcagctgaggaccacactgcactgtgatgataaagag
aagctccgtaggaagttggccctgttaaaaagggaatatctcagaacagcccagcgacta
cagcgtgcagagcgtctggaaggagtgcgccgacatgtgaggagcagaatctcacaggag
aacctccaggaccagagggacccagaggagacgtctaaacagagtctcagtccagggaga
ctgaacggcgccgatgcaacgaccccagataaagttcagtgcccgggacaatctgaaggt
ccatcagactctgaaaacttgaggaggagccaggtgatcaggttcctgcttccctctgat
gctgattgcccacaaacgcccgatcccatccacgatgcagtcagaggtcacagatccagt
cctgccctgcgcctcaggtctcgccgcagccgtctgctctgggagaggaggagcgcggag
gtttgcaggatcactgacgacagggaggaggtgcaggagcagagtgaccagctggagagg
gtcggaacaatagcaggggaggaaaaaatccattctgaagaggcagtgaaaatcaagtcc
gaagagtccgaggtggtgaatgaaagtgaagagttattttcttcttcagaatccgattct
ccttctctgctgctaacacactggaaaacacatgcacacactgaaacgggggagacagag
ggaaaggagataagagaagatgatgaacaaagggaaaaagaggacgaggcgactactgat
ggaacaaaagaatcagagtcgacttctttgctgcttcaatgtcagaactctgctgtacaa
agtgaagaaaagggacgagatcgaacactaaatggagaaagagaggaggcagtcagtggt
gagaatagtagaggacagagagaaacaacacgttctgtagtgaaccatcataaaaacatg
gaagaaacaacaactgggaaaatagaaactgaaaaaatgcacgatgacattatggaaata
aaagaagaaaagaatctcttggactcctgcactctagtggaaggactacttttcccagtg
gagtactacgtccggaccacaaggcgtatgtcgtcctcgcagagtcaacctgacatgcag
gccgtcctcctgtcccagctgagcgcgggacgaccacgccggggacggggacggggcaga
ggatcgaacagacacacacacaccagggagtgctcagatctaaactcacaggaagatttc
tcctctctgacaaatgcatctacagatcctcctgagatttcacatgtgtgtactgttgat
gcatctgctgagctttctgctaacagccagaggtccagtgagatttcaggtaaaagtcag
aacggcgtggatgcgtcttactcacctgcagtcagcgcgacgcatccaggagccgggagg
aggaggaggggcaggagaagaggccggggcagagggagaagtcaaactccaagatctatt
aagtgtttagacatcgttcagatggaaacctcagaggatcctctacccaccctcaccccg
ctctcctcctcccccccatcgccccgtgcccctgatggactgaagcctcgtctccctccc
caggaacctgtccttctgtcagatgacgacaggcctgtgtccacctgccacgcggggacc
cagcccccccccggggttaacggagctcagtgtagtcctgcttccagacacctgcacagg
atctatcccatgttcctgatgaacaacacgccctcacagagtagaggtgcatccagctgg
cgatctctcctcttgccttcctctccactctcccagacgtccctctttcctctcccgtct
ccatccaccggttcactgttcaacagcctcatgactttcgacatgcaccaagactttcat
ctccctgacgatcagtttgcgtctctgaagctacacaagctccggcaggtcgctgttgaa
tcaggagttgaacttttcacctccccctcttataacactcgcagccgcctccctcgctct
tacccttgctacagcaccagtgagccagtggtgccactttctctcccactcagcctcacc
ccgacagtttcaatggaagaaaccccggcgtgtgtggacgtccaaaacctgccgacagat
tccaagcttgtagacgagtccttagctgaagattcatccaacccagataaaacagaaccc
cctggagaacaacagactgaaaaacacgatgcaaagactcacaccagctcgacagaaact
gtgtcagtggctcaagaaagtcctgccgtctgtgaagatgacagtaaaaagcaggatact
gtggatacccacagccggagcaacacacacagatctatagacgacagtgtcaaacctcag
ccttacatgaactgtgcagacggtcctgcaggcaaagtggatggttgtgtagctgagccg
tcaaatgaactgaaaataaaacagcctgcatcagaaacagacgcgtattgttctggtgaa
gtttgttctgaggaggatcagacgtccacaaaccaccgaagagaagacggagctgtcatc
aagactctgtgcttcgagtgtccaccggaggaatcagctgaggaggcgtctgacagccgc
cctgctgcacagacacgtgatgactccgactctcctgtgaagcatcggacatcagaggaa
tcctccgaaccccccactcgtcctcccagagacagatcagggataagaaccagtcagaag
tcttcaccacaccccagagtccactcccagttgctgttgagtcctccgctgacctcagcc
agctgccccttcgcaccccctcacctgccctcctcagccctcctctccagccccacgctg
ccctccctaggactcaccccctgccctgtttccgccggcctccccctgacctcctctccc
tctgccccgcctctcaccctacctcctcctcacagcccagcaacccaccctctctctcct
ccggctctgtgtccctgtccgtccataacgtccctccctcccagccggcctctagtctcc
cgctccagtcaggacagggcttcatcacaagtggcagccgatcgtcatcccagcgttgag
ccagcaacccttgccacagcatccagcttccaggcccgaggcagagccgggcaggaggga
gagagaatggaggagactgcagagcaacatgtgataacacacactctgaaggccccagca
ggcggctgtctggtggacacgtgctgtctgccgggaccctcgggggggttgtgtgtagcg
gcagcaggaaagtgggctgtgtgtctgtggagtcagaccccagcatctgactggagctta
acacacacctggaccttcaactaccgggtgatcaatgtggttcctgtccccgatgcctct
gggctgatgtttgtgactttgggtcagctggaaatcagagaagtgagggtgctctcctgc
tccagcctcacccaggtgctgctgtgtgagggggtggtccaggtcgttgtaggcgtgtcc
gggtccagagtggttacctcctcccactcagcgacgggttcaaccctgcgggtgtttaac
gtctcagacgacaacagcgtgtggagctctcagcctctggagtctcccggtgtgtgcgtc
ggggccctcgctccagtggacggactctcggatgctctgattggcacagatgagggtggg
cgtgtctttgtctggaatctgaagagcggccagctgctgcgtagcatcgtcctcggagac
ggtttgtcgcacacagcctgtctccggggatactcccactgtggagtgttgtttgtcctg
ctacagcatcagctgctcagctccccggaggaaggaggaatggaggccaaagcaaaagac
gagctgttttctgaagaggacaggaagaagacggccttgttctcattggtcgctgttaac
cctctgacgggcaaatcaacgctggctactcgactgttcccccccaaagcctggtccggc
agactgtgtgaagccgatgtcaaccgctccagcgtggtcggcctgagtcagagcggctgt
gtgtgcgtgtgggagctcgggcgtccgggggcctcgaggatggtgtgggcccccgagagc
gagggctggcagctggcccgttggggggggccagacatgctggtgaccggccatcacaaa
ggagatgtcactgtacactgctacagcaaaacatag

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