Pleuronectes platessa (European plaice): 128436739
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Entry
128436739 CDS
T09923
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128436739 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pplt03019
]
128436739 (exosc1)
Messenger RNA biogenesis [BR:
pplt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128436739 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128436739 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
SPK
Motif
Other DBs
NCBI-GeneID:
128436739
NCBI-ProteinID:
XP_053274555
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All DBs
Position
3:21210996..21216484
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AA seq
194 aa
AA seq
DB search
MSPMKLCVPGDKLCNIEDCSPGTGVYQRHGYIYSSLAGYVLRKNEGGQLPVISVVRETEA
QLLPDVGAIVTCKVTSINPRFAKVQILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHTKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaaactatgcaacatagaagactgctct
ccaggcacaggagtatatcagcggcacggctacatctactcctcactagcaggctatgtg
ctcaggaaaaacgagggaggccagttacctgtgatctcagtggtgagggaaacagaagca
caactgctgccagatgtgggagcaatagtcacctgtaaggttaccagcatcaacccccgg
ttcgccaaggtccagatcctctacgtaggctccacgccactgaaagatcgcttcagaggg
accatcagaaaagaagatgtgcgtgcgacagagaaggacaaggtggagacatacaaaagc
ttcagacctggtgacatcgtcctggcaaaagtgatttctttgggtgatgttcagtcgaac
tacctgttgacaactgctgagaatgagctgggagtcgtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgcgagatgcagtgcccgcggacgcacaccaaagag
ttccgcaaagtggcccgagtgcagccggagtatctacaggcatga
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integrated database retrieval system
