KEGG   Pleuronectes platessa (European plaice): 128436764
Entry
128436764         CDS       T09923                                 
Name
(RefSeq) THO complex subunit 4 isoform X1
  KO
K12881  THO complex subunit 4
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt03013  Nucleocytoplasmic transport
pplt03015  mRNA surveillance pathway
pplt03040  Spliceosome
pplt05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128436764
  09122 Translation
   03013 Nucleocytoplasmic transport
    128436764
   03015 mRNA surveillance pathway
    128436764
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128436764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pplt03019]
    128436764
   03041 Spliceosome [BR:pplt03041]
    128436764
Messenger RNA biogenesis [BR:pplt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     128436764
    TREX complex
     128436764
Spliceosome [BR:pplt03041]
 Complex C
  Other components
   EJC/TREX
    128436764
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128436764
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 FYTT RRM_5 RRM_occluded YHR127W_C RRM_10
Other DBs
NCBI-GeneID: 128436764
NCBI-ProteinID: XP_053274585
LinkDB
Position
3:complement(27460735..27463468)
AA seq 267 aa
MSDKMNMSLDDIIKLNRKGGSGRGGGSSGPGAGSGRAGGSSRPTRGRQNNFNRERNSRPA
PYTRPRELPDKWQHDMFEDHVGGRRGPTAVPERSVESNGKLLVSNLEFGVSDSDIKELFA
EFGPLQKTSVHYDRSGRSKGTADVHFESKADAQKAMKHYNGVPLDGRPMKIQQVTSEVEE
HRPSTQSSNSGFDRSRLGQPKFERRDRGEKRQSGGGGGGGGGGGGGGGGGGFRGRGRGGG
NRAPQLSAEELDAQLDAYNAKFQMDTS
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtcagacaagatgaacatgtctctggatgacataatcaagttgaacaggaaaggaggc
agcggccgcggcggaggatcatcggggcccggtgcgggctcgggtcgggccgggggatcg
tcgaggccaacgcggggtcgacagaataacttcaaccgggagagaaacagcaggcccgca
ccgtacacccggcccagagagttaccagacaaatggcagcatgacatgtttgaggatcat
gtcggtggacgcagaggaccgaccgcagtacctgaaagaagtgtggagagtaacggcaaa
ctgctggtctccaatcttgaatttggtgtctccgactcagatatcaaggagctgtttgca
gagtttggtccattacagaaaacatctgttcactacgatcggtctggccgcagtaaaggc
acggcagatgttcactttgaaagtaaggctgatgcccaaaaagccatgaagcactacaat
ggtgtcccacttgatggccgtcccatgaaaatccagcaagtgacgtccgaggtcgaggaa
catagaccgtcaacacaaagttcaaacagcggttttgaccggagcagacttggtcaaccc
aagttcgaaaggagggacagaggcgaaaagaggcaaagtggtggtggcggaggaggtggt
ggcggtggaggaggagggggaggtggtggaggtttccgaggacgtggaagaggaggtgga
aacagagccccccagctttctgcagaggagctggatgcccagttggatgcatacaatgcc
aagtttcagatggacaccagttag

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