Pleuronectes platessa (European plaice): 128436880
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Entry
128436880 CDS
T09923
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128436880 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128436880 (smarca5)
03036 Chromosome and associated proteins [BR:
pplt03036
]
128436880 (smarca5)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
128436880 (smarca5)
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
128436880 (smarca5)
RSF complex
128436880 (smarca5)
WICH complex
128436880 (smarca5)
B-WICH complex
128436880 (smarca5)
NORC complex
128436880 (smarca5)
BRF complex
128436880 (smarca5)
NuRF complex (fruit fly)
128436880 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
128436880
NCBI-ProteinID:
XP_053274759
LinkDB
All DBs
Position
3:complement(9405749..9414690)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSESENFVLPREELPEVKEAGGAEEKSDSSDAGKESSSDAGADGADAPSSSAVAPGYEEK
VLTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLTAGELSV
IDSNRHRRTEQEEDEELLSESTKTTNVCARFDDSPSYVKAGKMRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTIALLGYMKHYRSIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDREQRNALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCLGD
TKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNS
AGKTDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMVVLEKLLPKMKK
QGSRVLIFSQMTRVLDILEDYCMWRNYSYCRLDGQTPHEERQISINAFNEPDSPKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERI
VERAEMKLRLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKDSEITDEDIDEI
LERGERKTMEMKEKMSSLGESTLRNFTMDTENSSVYKFEGEDYREKKKVINNWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIG
YKVPRNPEVPNSAQAQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKGASAVKRK
SEGTPDGRGRRKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgaaaacttcgtgctgccgcgggaagagctccctgaagttaaagaagcc
ggaggagcggaggagaagtctgactcttcagatgctggtaaagagtcctcctcagatgcc
ggtgcagatggagcagatgcaccatcttcctcagccgtggctccaggctacgaggagaaa
gtgctaacggaccggaccaacagatttgagtacctgttgaagcaaacagagttgtttgct
catttcatccaaccagccgcacagaagacccctacctctccgctgaagatgaaaccagga
cgtcctcgcataaagaaggatgaaaagcaaaacttgctgactgctggagaattgtctgtg
attgacagcaaccggcaccgtcggacggagcaggaggaggacgaggagcttctgagcgaa
agcaccaagacgaccaatgtctgcgctcgctttgacgattctccctcttatgtcaaagct
ggaaaaatgagggactatcaggtccgtggcctgaactggctcatctctttgtatgaaaac
ggcatcaatggcatcctcgctgatgaaatgggtttgggtaaaactctacagaccatcgcc
ctcctgggttacatgaagcactacagaagcatcccgggtccccacatggtgctggtgccc
aagtccaccttatacaactggatgaacgagttcaagcgatgggtgccttctcttcgtgca
gtctgcctgattggagacagagagcagaggaatgctttgatcagagatgtgctgctgcca
ggagagtgggacgtgtgcgtcacatcctacgagatgctcatcattgaaaaggcggtgttc
aagaagttcaactggaggtacctcgttatcgacgaagcccacaggatcaagaatgagaaa
tcaaagctatcagaaattgtacgagaattcaagaccaccaatcgtttactgctgactggt
accccccttcaaaataacctccacgagctatgggctctgctcaacttcctgctgcctgac
gtgtttaactcagcagaggactttgactcctggtttgacacaaacaactgcttgggtgac
acgaagttggttgaacgtcttcacactgtcctacgccctttcttgctccgtcgtattaaa
gctgacgtggaaaaaaccttgctcccaaaaaaagagatcaagatgtacgtgggcctgagc
aagatgcagcgagagtggtacacaaagattctgatgaaggacattgacattctgaactca
gcgggtaagacggacaagatgcgcctgctgaacgttctcatgcagctcagaaaatgttgc
aaccacccgtacctgtttgacggagctgagccaggtcctccgtacacaactgacctgcat
ctggccgtgaacagcgggaagatggtggtgctggagaagctgctacccaagatgaagaag
cagggttcccgtgtgctcatcttcagtcagatgaccagggtgctggacatcttggaggat
tactgcatgtggaggaactattcatactgccgcttggatggtcagacgccgcacgaggaa
agacagatctctatcaacgcattcaatgagcccgacagccctaagttcatcttcatgttg
agcaccagggccggtgggttggggatcaacctggcaacagccgacgtcgtcatcctctac
gactcggactggaaccctcaagtcgacctgcaggccatggaccgagctcacaggattggt
cagcagaagcaggttcgcgtctttcgtttcatcaccgaaaacacagtggaggagaggatc
gtagagagggccgagatgaaactgcggctggactccattgtcatccagcaaggaagactc
gtggatccgaacgcaaacaagctgggcaaggatgagatgctgtccatcatccgtcacggt
gccacacacgtgttcgcttccaaagatagtgagatcacagatgaggacattgatgaaatc
ctcgagagaggtgaaagaaagaccatggagatgaaagagaagatgtcgtctctgggtgag
agtaccctgagaaacttcaccatggacacagagaacagcagcgtgtacaaatttgaagga
gaggactatagagagaagaaaaaggtcattaacaactggatcgagccgcccaagagagag
aggaaagccaattacgctgtggatgcctactttagagaagccctgcgtgtcagtgaaccc
aaagcacccaaggctcctcgtcctcccaagcagccaaatgtccaggacttccagttcttc
ccccctcgtctctttgagcttcttgaaaaggaaattctcttttataggaagaccataggc
tacaaggttccccggaacccggaagtgccaaactctgctcaggcgcagaaagaggagcag
gctaagattgacgaggccgaggctctcacagaggaggaactggaggagaaggagaacctg
ctgcaacagggatttactatttggaacaaacgtgacttcaaccagttcatcaaagccaac
gagaagtggggaagagatgatatcgagaacatcgccagagaagtggaggggaaaaccccc
gaagaagtgatggaatattctgctgttttctgggagcgctgcaatgagctgcaggacatc
gagaagatcatggcccagatcgagagaggagaggccaggattcagagaaggattagcatc
aagaaagcactcgactcaaagattggtcgctacaaggctcccttccatcagctccgtatt
tcctacggcaccaacaaaggcaagaactacacggaggaagaggaccgcttcctcatctgt
atgctccacaagctgggcttcgacaaggagagtgtgtacgatgagctgcgccagtgcatc
cgcaactctcctcagttccgcttcgactggttcctcaagtccaggaccgccatggagctt
cagagacgatgcaacaccctaattacgctgatagagagagagaacatggagctggaagag
agggagaaggcggagaagaagaaacgaggtccaaagggtgcatcagctgttaaacgaaag
tcagagggaacccccgacggtcgcggacgcaggaagaagctcaagttgtga
DBGET
integrated database retrieval system
