Pleuronectes platessa (European plaice): 128437258
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Entry
128437258 CDS
T09923
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt02010
ABC transporters
pplt04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128437258
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128437258
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pplt02000
]
128437258
Transporters [BR:
pplt02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128437258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
MRS2-like
Motif
Other DBs
NCBI-GeneID:
128437258
NCBI-ProteinID:
XP_053275303
LinkDB
All DBs
Position
3:19199105..19236060
Genome browser
AA seq
2269 aa
AA seq
DB search
MAVFTQLGLLLWKNFTYRRRQTIQLLIEIVWPLFIFLILISVRMYYPPYEQHECHFPNKA
MPSAGTLPWMQGIICNANNPCFRNPTPGESPAVVGNFNDSIISRLFIDAKKILLYTQNDK
SYEGYKGLLRALRKLQKNTARFKLKDFLKDNETLSHFLHHNASLPRHALKQIVEADVNLE
KVLTKGFGFHLRDLCNSTTLDEFVHIADRNVSLMTQEIICKSSSDWLNKAQSHFLSNLDF
LKPIRKDVKSDPKVVQEVSAATDHLLESLGALAVELAGMKSWKDMRKEILYLTVNATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGSGNDSDSEPSTSYDNSSTP
YCNSMMRKLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQELGVLRDLG
GMWQEMRPKVWSFMENSEEMDLVRTLLQNNASAAFFNAQLSDTEWRVSDVIDFLSKSSED
RRPAGSAFTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLSNQKFWA
GIVFPDIARTNSTDLPSNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGF
SYLQDVVEQGIIRAITGSKERTGVYIQQMPYPCYVDDVFLRVMSRSMPLFMTLAWMYSVA
IIIKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISACLLVVLLKMGNLLPYS
DPGVVFLFLGSFGVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGF
GAKLVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEDDSYNLTTSICLMLFDAF
LYGVMTWYIEAVFPGQYGIPRAWYFPLTRTYWCGEKETRNLSAPPSKKGNTEAVCIEEEP
SHIEPGVYIENLVKVYSHGKKLAVDELSLRFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TSGTAYILGKDIRTELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYGRLKGLPEEKVKAEM
EQIVNDVGLPHKRKSRTCTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWD
LLLKYRPGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKR
DYDLALQSCRNSASTVCYKKTEKEDNVSESSSDAGLGSEPESETTTIDVSLISNLIFKHV
SEARLVEDLGHELTYVLPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTSLEEIFLKV
AEDSGVDAVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFEFNDSEESRETDWLSGTDG
KGSYQVKGWSLKRQQFVALLWKRYLYAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALDPSMYGEQFTFISNDMPENAHTNKLLGALMGKPGFGTRCMEGEPLLNNSCTPLE
DEWSIPQVAQGLMDMFENGNWTMENPSPMCECSCDGRKRMLPECPAGAGGLPPPHMKISD
KDTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIGVNEFRYGGFSLGAPGSQLLSNSDDLDE
AIAHLRRRFRLERGAAADRFFHSLSSFVQGLDSKNNVKIWFNNKGWHSIGSFLNVMNNGI
LRANLPAGKDPTKFGITAHNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHLQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFVCFQQDAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEVGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMSDALERFGENRFRSPLAWDMVGKNL
FAMALEGLIFFIITVLIQYRFCIKARSSTSHLKPIGEEDEDVARERQRILGGGGQTDILE
LRQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSLVTGGEAYLA
GKSVTKEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLG
LVKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLR
PVMGFIEHELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSQNKEALSIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDMHLSKRDAVVVDFPQLNSFLKNSKTRESCV
NT seq
6810 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcttcactcaactgggtttgctgctttggaaaaacttcacctaccgacggaga
cagactatccagctgctgattgagatagtctggcccctgttcatcttcttgatcctgatc
tcggtgcggatgtactatccgccctacgagcaacatgaatgccatttcccaaacaaggcc
atgccctctgcgggtaccctgccctggatgcaaggcatcatctgtaacgccaacaacccc
tgtttccgcaatcctactcctggagagagccccgcggtcgtgggaaacttcaacgactct
ataatctctcgtctgttcatcgatgccaaaaagatcctgctgtacactcagaacgataaa
agctacgagggctacaagggcctgctgagggccctcaggaagctgcagaagaacactgcc
cgcttcaagttgaaggactttttgaaagacaacgagaccctttcccacttcctgcaccac
aatgcctcacttcctcgtcacgctttgaaacagatagtggaggcagacgtcaatctggag
aaggtgctgactaaaggatttggcttccacctcagagacctctgtaacagcacgacactg
gatgagtttgtccacattgctgaccgcaacgtgtcgcttatgactcaagaaattatctgc
aagtcctccagcgactggcttaacaaggcccagagccacttcctgtccaacctagacttc
ctcaaacctattcggaaggatgtgaagtcggatcccaaagtcgttcaggaggtctcagct
gcaaccgaccatcttctggagagcctgggagcgctggctgtggagctcgccggtatgaag
agttggaaagacatgcgaaaggagatcctctatctgactgtaaatgccacaggctctcca
aaccagatgtaccaggcggtgtcccgtatcgtctgcggacaccccgagggaggtggcctc
aaaattaaatctctcaactggtacgaggacaacaactacaaggccctgtttggaaaccat
ggcagcggcaacgacagcgacagcgagcccagcacttcttacgacaactcttccacacct
tattgtaacagcatgatgcggaagctggagtcaagccccatttccaggatgatctggaga
gccctgaagccactgctcatgggaaagatcctgtacaccccagatacaccagcaacacag
aggatcatccatgaggttaataagactttccaggagctcggcgtgctgagggatcttgga
gggatgtggcaagagatgagacccaaagtttggagcttcatggagaatagcgaagaaatg
gacttagtcaggaccctgctgcagaataacgccagcgctgcattcttcaacgcccagctc
agtgataccgagtggcgcgtgtcagacgtgatcgatttcctgtccaagtcctcagaggac
cggagacctgcaggatccgccttcacctggagagaggtcttcaacgagaccgaccaagcc
atacagaccatctcacgcttcatggagtgtgtgaacctggacaagctggagcctgtggct
aatgaggagcgactggtcaacaagtccatgggtctcctgagcaaccagaaattctgggct
ggaatcgtgtttcctgatatcgcccgtaccaacagcaccgacctgccttccaatgtcaac
tacaagatccgcatggacatcgataatgtggagaggacgaacaaaatcaaagacgggtat
tgggaccctggtcccagagcagaccccttcgaggatctgcggtacatctggggtggattt
tcctacctgcaggacgtcgtggagcaaggaatcatcagagccatcactggctcaaaggag
aggacaggcgtctacattcagcagatgccttacccctgttatgtcgatgacgttttcctt
cgggtgatgagtcggtcgatgcctctcttcatgaccttggcgtggatgtactccgtggcc
atcatcatcaagggcgttgtgtacgagaaggaggcacggctcaaggagaccatgaggatc
atgggactgaacaacggcactctgtggctcagctggttcatcagcagtttaatcccgctg
ctgatcagcgcctgcctgttggtcgtgttattaaagatgggcaacctgctgccgtacagt
gatccaggggtcgtgttcctgttcctgggatcgttcggcgtggtaaccatcatgcagtgt
ttcctcatcagcaccctgttctctcgtgccaacctggcagcggcctgcgggggcatcatc
tacttcactctctacctgccctatgtgctgtgtgttgcctggcaagactacgtcggcttt
ggagccaaacttgttgtgagtctgctgtctcctgtcgcttttgggttcggctgtgaatac
ttcgccctgtttgaggagcaaggcgtcggtatccagtggtccaatctgctggccagccct
ctggaagacgacagctacaatctaaccacctccatctgcctcatgctgtttgatgccttt
ctgtacggagtaatgacctggtacatcgaagctgtgtttcctggtcagtatggtatcccc
agagcttggtacttccctttgactaggacgtactggtgcggggagaaagagaccagaaac
ctctccgcccctccgtcaaagaagggcaacactgaagctgtgtgtattgaggaggagcct
agccacatcgaaccgggtgtttacattgaaaatctggtgaaggtctacagccatgggaaa
aagctggctgtagacgagctgtcactgaggttctacgaaggacagatcacctccttcctc
ggacacaacggagctggcaagaccacaactatgtcaatcctgacggggttgttcccgccc
acttccggtacggcctacatccttggcaaggacatccgcactgagctcagcaccatccga
cagaatctgggcgtctgtccgcagcacaacgtactgttcagcatgctgacggttgaggaa
cacatctggttctacggccgtctgaaggggctgccggaggagaaggtgaaggctgagatg
gagcagatcgtgaatgatgtcgggctgccgcacaaacgaaagtcccgcacctgcaccttg
tccggtgggatgcagaggaagctgtcagtggccctggcttttgttggaggctcgaaggtt
gtgatcctggatgaaccgactgctggggtcgatccttatgcacgtaggggcatatgggac
ctgctgcttaaatacagacccggccgcaccatcatcctgtccactcatcacatggatgag
gccgacatcctgggcgaccgcatcgccatcatctcccatggaaagctgtgctgcgtgggc
tcctcacttttcctgaagactcagctggggacaggctactacctgaccctggtcaagaga
gactacgacctggcccttcagtcctgcaggaattctgccagcaccgtctgctacaagaaa
acagagaaggaggacaacgtatcagagagcagctctgatgctggtttgggcagcgaaccg
gagagtgaaaccaccaccattgatgtatccctcatctctaacctgatattcaagcacgtc
tcggaggctcgcctggtggaggatctcggtcatgaactcacatatgtgttgccctaccag
tccgctaaagacggagcctttgtggagctcttccatgagcttgacgaccgactgaccgac
ctgggaatatccagctatggaatatctgacacaagcctggaagagattttcttgaaagtg
gctgaggacagtggagtggacgctgtggagctttcagatggagtcgtaccaacaaggact
cgtcgccatcacgccttcggagaccaccagagctgcctgaagcccttcaccgaggacgac
tttgaattcaacgactctgaagagtcccgtgagaccgactggctcagtggaacagatggt
aagggttcgtaccaggtgaaaggctggagtctgaagaggcagcagtttgttgcgctgctc
tggaaacgatacctctatgctaaacgctccagaaaaggattctttgctcagattgttctg
cctgcggtgtttgtgtgtatcgctctggtgttcagcctgatcgttcctccctttggaaag
taccccagtctggctctggatcccagcatgtacggagaacagtttaccttcatcagtaat
gacatgcctgagaatgcccacaccaacaaactacttggagctctgatgggaaaacctgga
tttggaacacgctgcatggaaggagaacccctactgaataactcgtgcactccattagag
gatgagtggtcgatcccacaagtcgctcaaggtttgatggacatgtttgaaaacggcaac
tggaccatggagaatccgtctccaatgtgcgagtgcagctgcgacggccgcaagagaatg
ctgcccgagtgtccggctggtgctggcggacttccaccaccacatatgaagatcagtgac
aaagacacacttcagaacttgactggcaggaacgtctcagactatctggttaaaacctac
gctcagattattggaaagagcctgaagaacaagattggggtcaacgagttcagatatgga
ggattctcgctgggtgcccccggatctcagcttctgtccaacagcgacgatctcgacgaa
gcaatcgctcatctgaggagacgcttccgcctggagaggggagcagcagctgatcgtttc
tttcacagtctttccagttttgtccaaggattggacagcaagaataatgtcaagatctgg
tttaacaacaagggctggcacagcatcggctccttcctcaacgtgatgaacaacggcatc
ctgcgagcaaatctgccagccggcaaagaccccacaaagtttggtatcaccgcccacaat
cacccactcaacctcaccaaggagcagctctcacaggtcgcactgatgacaacgtcagtg
gacgtgttggtgtccatctgcgtgatctttgccatgtccttcgtcccggccagttttgtg
gttttcctcattcaggagagagtgaacaaggcaaagcacttgcagttcatcagtggagtg
cagcctctcctctactggctggccaactttgtctgggatatgtgcaactacatcgtccca
gctacattggttatcattatctttgtgtgtttccaacaagacgcctacgtctcctccact
aatctgcctgtgctggctctgctgctgctgctctacgggtggtcgatcacccctctgatg
tacccagcctcatttttctttaagattccgagcacggcctacgtggttctgaccagcgtc
aacatactgataggaatcaatggcagtgtctccacatttgtgctggagctgttcggcagc
aatgaggtcggtggcatcaacgacatcttgaagaacgtgttcctcatcttcccacacttc
tgtctgggcagaggactgattgacatggtgaagaatcaggcaatgtctgatgctttggag
aggtttggtgaaaaccggttccgttcacctctggcttgggacatggttggaaagaatctg
tttgcgatggccctggagggcctcatcttcttcatcatcaccgtcctcattcagtatcgc
ttctgcattaaggccaggtcttccaccagtcacctgaagcctattggagaagaagatgag
gacgtggccagagagagacagaggatcctgggtggaggaggacagaccgacatcctggag
ctcaggcagcttaccaagatttacaagcggaaacagaagccagcagtggaccggctgtgt
gtcggcatcccccctggagagtgcttcggtttgctgggggtgaatggagcaggaaaaacc
agcacctttaaaatgctgacaggagattctctagtgaccggtggagaggcgtacctggct
ggcaaaagtgtaaccaaagagatcgatgaagtgcatcagaacatgggctattgtccccag
tttgacgctatcaacgacctgttgactggcagagagcatctggagttttacgccatcctg
agaggagtgcctgagaaggaagtctgcgaggtggcagagtggggcatccggaagctgggt
ctggtgaaatatgtggacaagtcagcaggaagctacagtggaggaaacatgaggaaactg
tcgactgccatcgctctcataggaggaccgcctgtcgtgtttctggatgaaccaactaca
ggcatggaccctaaggcgcgtcgggccttgtggaacgccatcctgagcatcatcaaggag
ggacgatctgtagtcctcacctctcacagcatggaggagtgtgaggccctctgcaccagg
atggccatcatggtcaacggcaggttccgctgtctgggcagcgtacagcacctcaagaac
agatttggtgatggctacaccatcatcctgcgggtggccgggccggacccagaccttcgg
ccggtgatggggttcatagagcacgagctcccaggcagcacgttgaaggagaagcaccgc
aacatgctgcagtaccagctgccctcgtccctcacttccctcgcccgcattttctctctg
ctctcccagaacaaggaggcgctcagcatagaggactactcagtctctcagaccactcta
gaccaagtgtttgtaaatttcgccaaggaccaaagtgacgaggaccatttgaaagacatg
catctgagcaagcgggacgctgtggtagtggactttccccagctaaactcctttctcaaa
aacagcaagactcgggagagctgcgtctga
DBGET
integrated database retrieval system
