Pleuronectes platessa (European plaice): 128437313
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Entry
128437313 CDS
T09923
Name
(RefSeq) transcription factor Sox-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pplt03000
]
128437313
Transcription factors [BR:
pplt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128437313
SSDB
Ortholog
Paralog
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Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128437313
NCBI-ProteinID:
XP_053275390
LinkDB
All DBs
Position
3:15538448..15542650
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AA seq
495 aa
AA seq
DB search
MSGEEHSLSEAELSPGASDDGHSLSPTQPGAPPGPGSPLAVPPQQLAALCGADGSEDDGG
TSRGKSEEEDDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKAKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPEYKYQP
RRRKNGKLTTGEADSQGEGEASHSQSHYKTLHLEHNGGAGSPLGDLHHHHHHHHHPAGHS
PPTPPTTPKTELQSGKLSDAKRDGAAGAAGGSGGSRGALGVGAESASGGPSSSGAKPHID
FGTMDIGEISHEVMSNIEPFDVNEFDQYLPPNGHPQSGTGGPAAGSSASSYAYALAAASG
HSAWLSKQQPQASPSSSDPTKAQIKSESVSGSHYAEASSSPSSGTHVTYTPLSLPHYGSA
FPSLASRAQFEYGEHQAPGAYYAHSSQAPGLYSAFSYMGPTQRPLYTTIGDPSSVAPSHS
PTHWEQPVYTTLTRP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgaggagcacagcctgtccgaggcggagctgagtcccggggcgtcagacgac
ggtcactcactgtcaccgactcaacccggagcgccgccgggcccgggctcacctctggcc
gtgccgccgcagcagctcgccgcgctctgcggtgcggacggcagcgaagacgacggaggc
acatccaggggcaagtcggaggaagaggacgatcgcttcccgatcggtatcagggaggca
gtgagtcaggtgctggacggatatgactggacacttgtgcccatgccggtgcgcgtaaac
aacgggaacaaagcaaagccccacgtcaagaggcccatgaacgccttcatggtgtgggcg
caggcggcaaggaggaaactggcggatcagtacccccacctgcacaacgccgagctgagc
aagaccctcggcaaactgtggaggctgctgaacgagagcgacaagaggccattcatcgag
gaggcggagaggctgaggaaacagcacaagaaggactacccggagtacaagtaccagccc
cggagacgcaaaaacggcaaactaacgaccggtgaggctgatagtcagggggaaggggag
gccagccactcccagtctcactacaagaccctgcatctggagcacaatggcggcgctggt
tctcccctgggtgacctgcaccaccaccaccatcaccaccaccatcctgctggccacagc
ccacccacgccccccaccaccccaaagacagagctccagtctggaaaactgtcagatgcc
aagagggatggggcagcaggagcggcaggaggatcaggggggtccagaggagccctcggg
gtgggagctgaaagtgcatccggtggtccctcatcatcgggagctaaaccccacatcgac
tttggcaccatggatattggcgagatcagccatgaggtgatgtccaacatcgagccgttt
gatgtcaatgagtttgaccagtaccttcctccaaacggccacccgcagagtggaaccggg
ggccctgcagccggctcctcggcctcgtcttatgcctacgccttggccgccgctagtggg
cactcagcctggctctccaagcagcagccccaggcctctccgtcttcctccgaccccaca
aaggcccagatcaagagcgagtcagtgtctgggagccactatgccgaggcctcgtcctct
ccctcctcgggcacccatgtcacctacacgccgctcagcctcccccactacggctccgcc
ttcccctcgctggcctccagggctcagtttgagtacggagagcatcaggccccaggggcg
tactatgcccactccagccaggccccggggctgtattcagccttctcctacatgggccct
acacagaggcctctgtacactaccataggagacccctccagcgtggccccctcccacagc
cccacacactgggagcagcctgtttacaccacactcacaagaccttga
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