Pleuronectes platessa (European plaice): 128437674
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Entry
128437674 CDS
T09923
Symbol
rab11fip1a
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128437674 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128437674 (rab11fip1a)
Membrane trafficking [BR:
pplt04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128437674 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
128437674
NCBI-ProteinID:
XP_053275815
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All DBs
Position
4:13407014..13420216
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AA seq
1241 aa
AA seq
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MSLVDQSQQWFPTSVQVTVHQARNLRVKGKNGTNDSYAIMQVAKDKFSTSVAEKSVAPVW
KEEASFDLPLFHPGNAERCTLHVIVMHRAQVGLDKFLGQAVVNLLDLHDDRSRTKTDWFK
LVDKSGKADKVRGEVLLDMKFMRNNMSASMFDLSMQDKPRSRISKLKDKVRGKKKDGFSD
SASAIVPSVSQVLTDSDGEADAQSLNQSPGVKKKSKLKSLFGPKSNLQRNISQSMSTLGA
LPENNSSLSGSRSSGLNVDSPEVKKKFKFLGHKRSGSSDSKVSQGPFSLLGRSKQSNSDQ
NNFCINGNHVYTEETESKSGSTLSLNSSGQGSVGDIHKHTSDASASESTDRAILEQQRHQ
EEGERRQAEERHKAEAKRVEEEEKYRADARRLQEEEERRYQEEQERSRKFLEDEARRTKQ
REEEEKRNQEEEHRMRQAAENQRLEEERRNSEEQKKQEEASMSDRLSTLFGMIRKKEEKK
EEVQQQTKEELPETAPRSDSSSLDQPISHQPTNPFEEIPLSSDGSPADLQKSSRNPQTPS
AMVFLNRTAKVSAVKPRLVQILESEPPDCXTPSQLCPSPAASDSTLSSVPSEPPDSFSNF
HSSLPPPNVSKSLSGSPRGSTEDLSSVESEGSSPDMADKKKKAPLPPTYHLHGNQTGGNP
IPVGEMKSSSYIEADGSQQGKKMSIPLPDYESLFPKKRHGVQGETRWDHIIAEVNQKQRD
TAPELLGPEMSVDGPVEHDRSPRSFTSQESPAMRHYQIQPEETKPMSLKKTASPAPPKPV
LSSHPQSIGQNQYTAQQSGMRPNPSAVQGPRNTDLASRGGLSGMSREGARKALQPSPAAT
LVPRPSIQMDTSPPEDQQKEAPTAKPRQRASGKEPTEKEVSAADKNQNSNAQALFSQSVK
SMDKKSGQAKDNMVEFDPFPRTELLSKDTRAQQKQKQKQEVDNILTGNIQREQKPEIQGM
TANDFEKIFSQDKPTDPFASFSRSNSNNQSPNRKDSEQAGFHAFQRKNSQRRSLTSKTPP
EDKGLQSHQEAASKEGTTKMAAKQDLVTNDVRKEPFALQPQADVKTQSGFYKEEDQLGAE
PFAVPSAYTSSEALQAITEEPGALSGGKTFLQAWVSPSEVQPVSAQNSNGGGQALTARRP
HPVKPLTSVESQYATSTKTGKDIKVRDSTPGKIKVADPLDSGPYTQLTQGELISLVVRQQ
TDLSKKDAKIGELEEYIDNLVVRVIEEKPSILQALNAAKQV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggtggaccagagccagcagtggttccccaccagcgtccaggtaacggtgcac
caggctcgaaacctgcgcgtcaaggggaaaaatggcaccaacgactcttacgccatcatg
caggtggccaaagacaagttctccacctcggtggccgagaaaagtgtcgctccggtgtgg
aaggaggaggcttcgttcgacctgccgctcttccacccggggaacgccgagcgatgcacc
ctgcacgtcatcgtgatgcaccgggcacaggtgggactcgacaagttcctgggtcaagct
gtggtcaacctactggatctacacgacgacaggtcccgcaccaagaccgattggttcaag
ctggtggacaagtccggaaaagcagataaggtgcgaggagaagtgctgctagatatgaag
ttcatgagaaacaacatgtcggccagcatgtttgacctttctatgcaagacaaaccccgc
tcacgcatctccaagctgaaggacaaagtccgtggaaagaagaaggacggcttctctgac
tctgcctcagccatcgttccctctgtcagccaggtcctcactgacagtgacggagaggct
gatgctcagtcactcaatcagtctccaggagtgaaaaagaaatcaaagctcaaatccctc
tttggccctaaatccaacttgcagcgtaacatttcacagtccatgtctacactgggggct
cttcctgagaataactcatctcttagtggcagtcgctcatctggcctcaatgtagactca
cctgaagtgaagaagaaattcaaattcctgggacacaagcgatcaggcagctctgacagc
aaggtgtctcagggtcctttctccctactgggtcgctccaagcagagcaacagtgaccag
aacaacttttgcatcaatggcaatcatgtgtacacagaggagacggagtcaaagagtgga
tctactctcagtctgaacagctcaggccaaggctccgtgggagatatccacaaacacacc
tctgatgcctctgcctctgaatcgacagacagagctatactggagcaacagcgccatcaa
gaggagggagagagacggcaagcagaagagaggcacaaagccgaagcaaagagggtggag
gaagaggagaaatacagggcagatgccaggagattgcaggaggaagaggagcgcagatat
caagaggaacaggagaggagcagaaagttcctcgaggatgaagcaaggaggacgaaacag
agggaggaggaagagaaaagaaaccaagaggaagagcataggatgcgacaagcagcggag
aatcagaggctcgaggaggagcgtcgcaattcggaggagcagaaaaaacaggaggaggcc
tccatgagtgacaggctgtcaactctgttcggaatgatcagaaagaaggaggagaaaaag
gaggaggtgcagcagcaaactaaagaggagttgcctgaaacagcccctcgcagtgactcc
agcagccttgatcaaccgatctcccaccagcccactaacccatttgaggaaattcctctc
agcagtgatgggagtccagctgatcttcagaaatccagccgtaatcctcaaaccccctct
gccatggtcttcctcaaccgcacggccaaggtgtctgcagtcaaacccagattggttcaa
attctggagtctgaaccccctgactgttaaacccccagtcagctgtgtccttccccagcc
gcctctgactccaccctctctagtgtcccgtctgagccccctgatagtttctccaacttc
cactcatccttgcctccaccaaacgtaagcaaaagcctgtctggttcccctcgtgggagc
acagaggatttgtcatctgtggaatctgagggatcttcacccgacatggcggacaagaag
aaaaaagcccccctgccacctacgtatcatctacatgggaaccaaacaggaggaaatccc
attcctgtcggagagatgaaaagttcttcctacattgaggcagacggatcgcaacaaggc
aaaaagatgtctataccacttcctgattatgaatccctcttcccaaagaagagacacgga
gtacaaggagaaactcggtgggatcatattatcgctgaggtcaatcagaaacaaagggac
actgcacctgaacttctgggtccagagatgagtgtggatggcccagtggagcatgatcgg
agtcctaggtcgttcacatcgcaagagagtcctgccatgaggcattatcaaatacaacct
gaggagaccaaacctatgtcgttaaagaagacagcatccccagctccccctaaaccagtc
ttatcctcacatccccaatcaattggtcaaaatcagtacactgctcagcagtctggcatg
agacctaatccgtctgcagtgcagggaccgagaaacactgacttagcaagcagaggaggt
ctctctgggatgtccagggagggagcaaggaaggcgttgcagccatcacctgcagctaca
cttgtacccagaccaagtatccaaatggatacaagtccaccagaagatcagcagaaagaa
gcacccactgccaaacccagacagagggctagcggcaaagagccaacagagaaagaagtt
tctgctgcagacaaaaaccagaacagtaatgcccaagcattatttagtcagagtgtgaaa
agcatggacaaaaagagtgggcaggcaaaggataacatggtagagtttgacccgttcccc
aggactgaacttctatccaaagacacgcgggcacagcagaagcagaagcagaagcaggaa
gttgacaacattttgactggcaacatccagagagaacagaaacctgaaattcagggaatg
acagccaatgattttgagaaaatatttagtcaagataagccaactgatccctttgctagt
tttagtcgcagcaattcaaacaaccagagtccaaatagaaaagactccgagcaagcgggc
tttcatgcttttcaaagaaagaattcacagagacggagtcttacatcaaaaactcccccg
gaagataaaggtctccagtctcatcaagaggcagcatctaaagaaggaacaaccaaaatg
gcagctaagcaagacctcgtcacaaacgatgtcaggaaggagcctttcgcacttcagcct
caagctgacgtgaagacacagagcggtttttacaaagaagaggatcagcttggagctgaa
cctttcgctgttccctctgcatatacttcctctgaggccctccaggctattacggaggaa
ccaggggctctgtctgggggaaagacatttttgcaagcgtgggtctcaccgtctgaggtt
cagcctgtcagtgctcagaatagcaatggaggtgggcaagccttaacggcacgcaggcct
caccctgtgaagcccctgacctcagttgagagccaatatgccaccagcaccaaaactggg
aaggatataaaggtccgggacagtacaccggggaagataaaggtggcagaccctttagac
agcggaccttacactcagctcacccagggggagttgatctcactggtggtgaggcagcaa
acagacctgtccaagaaggacgccaaaatcggggagctggaagagtacatcgacaacctg
gtggtccgagtcatcgaggagaaacccagtatcctgcaagccttaaacgcagccaagcag
gtgtaa
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