Pleuronectes platessa (European plaice): 128437721
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Entry
128437721 CDS
T09923
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128437721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128437721
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128437721
Protein recycling
Other Rab GTPase associated proteins
128437721
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
Snapin_Pallidin
CSN8_PSD8_EIF3K
Motif
Other DBs
NCBI-GeneID:
128437721
NCBI-ProteinID:
XP_053275906
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All DBs
Position
4:18784719..18790546
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AA seq
470 aa
AA seq
DB search
MWTDKQRGIRVSKEELLCKSACGYYGNPAWQGLCSKCWRDRARPAGAQRQDTRPRNDGLP
LTFSKFEEKKSIEKGHRINTMRRLFWGSPSPPKRQESSESQTNALKAYQSLEPGDFTGFL
KILRSPSSQRLQSRCTAFLNTVEAYHDLPVQKQSDLVQDFFQSFAEYFDSLPEAQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSVPFPDKQTAVTSDP
FLPAITAIIEMDAKRAPQDKLACVCRCSQHVFEALSNSSSEPANADDFLSGLIYVVLKAN
PPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIDKLDGPALNLSPEEFESYMLN
RRAPPGGIKRQQTTSDTNHLLEELQGRQEKLHQGMDSLSVQLQNWVQAVHSQLDEATAQF
ALVQKEVTAQAALSDVLSSTSYSAPPQGDDKDQSVLVLADLHAGPKDTDC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtggactgacaagcaaagaggaatcagagtttctaaggaggagctgctctgtaagagt
gcctgtgggtattatggaaaccctgcatggcaaggcctctgctccaagtgctggagagac
agagcccgtccagctggagcccagagacaagacacgaggccgagaaatgatggccttcct
ctcaccttctccaaattcgaggagaagaagagcatcgagaaaggccatcggattaacacg
atgaggagactcttctggggaagcccatcgcctccaaaacgtcaagagtcttctgaaagt
caaacaaatgcattaaaagcataccagagccttgagcctggggacttcaccggcttccta
aaaatcctacggagcccttcctcccagcgcttgcagtcccgatgcacagcttttctcaac
acagtggaggcttaccatgatctgccggtacagaaacagtcggacctcgtgcaggatttc
ttccagtcgtttgcagaatattttgacagtcttcctgaggctcaggtcactcagataatg
gagcacgtagagaagcttataatgacacggttgcacaaatgggttttctgtcatgacagt
tgtgatgatgaacagaaggacctggctctccagaggagaatacgctccttgaactgggtt
acgccgcagatgctgagtgttccttttcctgataaacagactgcggttacaagcgacccc
tttctgcctgctataacagccataattgaaatggatgccaaacgagcgccacaggacaaa
ctagcctgtgtgtgcagatgcagtcagcatgtcttcgaggcactctccaactcaagcagt
gaacctgctaatgcagatgacttcctttcaggactgatttatgtggtgttgaaggccaac
ccaccccggctacactctaacatgcaatacgtgattcggtttggtctccctcacagtctg
atggcaggagagagtggctactacttcacaaatctgtcttgcgctgtggccttcattgat
aagctggatggaccggcactaaacctcagtccagaggagttcgaaagctacatgctgaat
cggcgtgctcctcctggaggaatcaaaaggcagcagactaccagtgacacaaaccacctc
ctggaggagctacaaggccgacaggagaagctgcaccaggggatggattctcttagtgtt
cagcttcagaactgggttcaagcagttcattcccaactggatgaggcaacagcacagttt
gctttggtacagaaggaggtaacagctcaggctgcgctctcagacgttttgtcatccaca
tcttacagtgcgccgcctcaaggggatgacaaagaccagtcggtgctggtgcttgctgat
ctacatgcaggtccaaaagataccgactgttag
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