KEGG   Pleuronectes platessa (European plaice): 128437721
Entry
128437721         CDS       T09923                                 
Name
(RefSeq) rab5 GDP/GTP exchange factor
  KO
K20131  Rab5 GDP/GTP exchange factor
Organism
pplt  Pleuronectes platessa (European plaice)
Pathway
pplt04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:pplt00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    128437721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pplt04131]
    128437721
Membrane trafficking [BR:pplt04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    128437721
 Protein recycling
   Other Rab GTPase associated proteins
    128437721
SSDB
Motif
Pfam: VPS9 zf-A20 DUF5601 Snapin_Pallidin CSN8_PSD8_EIF3K
Other DBs
NCBI-GeneID: 128437721
NCBI-ProteinID: XP_053275906
LinkDB
Position
4:18784719..18790546
AA seq 470 aa
MWTDKQRGIRVSKEELLCKSACGYYGNPAWQGLCSKCWRDRARPAGAQRQDTRPRNDGLP
LTFSKFEEKKSIEKGHRINTMRRLFWGSPSPPKRQESSESQTNALKAYQSLEPGDFTGFL
KILRSPSSQRLQSRCTAFLNTVEAYHDLPVQKQSDLVQDFFQSFAEYFDSLPEAQVTQIM
EHVEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSLNWVTPQMLSVPFPDKQTAVTSDP
FLPAITAIIEMDAKRAPQDKLACVCRCSQHVFEALSNSSSEPANADDFLSGLIYVVLKAN
PPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIDKLDGPALNLSPEEFESYMLN
RRAPPGGIKRQQTTSDTNHLLEELQGRQEKLHQGMDSLSVQLQNWVQAVHSQLDEATAQF
ALVQKEVTAQAALSDVLSSTSYSAPPQGDDKDQSVLVLADLHAGPKDTDC
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtggactgacaagcaaagaggaatcagagtttctaaggaggagctgctctgtaagagt
gcctgtgggtattatggaaaccctgcatggcaaggcctctgctccaagtgctggagagac
agagcccgtccagctggagcccagagacaagacacgaggccgagaaatgatggccttcct
ctcaccttctccaaattcgaggagaagaagagcatcgagaaaggccatcggattaacacg
atgaggagactcttctggggaagcccatcgcctccaaaacgtcaagagtcttctgaaagt
caaacaaatgcattaaaagcataccagagccttgagcctggggacttcaccggcttccta
aaaatcctacggagcccttcctcccagcgcttgcagtcccgatgcacagcttttctcaac
acagtggaggcttaccatgatctgccggtacagaaacagtcggacctcgtgcaggatttc
ttccagtcgtttgcagaatattttgacagtcttcctgaggctcaggtcactcagataatg
gagcacgtagagaagcttataatgacacggttgcacaaatgggttttctgtcatgacagt
tgtgatgatgaacagaaggacctggctctccagaggagaatacgctccttgaactgggtt
acgccgcagatgctgagtgttccttttcctgataaacagactgcggttacaagcgacccc
tttctgcctgctataacagccataattgaaatggatgccaaacgagcgccacaggacaaa
ctagcctgtgtgtgcagatgcagtcagcatgtcttcgaggcactctccaactcaagcagt
gaacctgctaatgcagatgacttcctttcaggactgatttatgtggtgttgaaggccaac
ccaccccggctacactctaacatgcaatacgtgattcggtttggtctccctcacagtctg
atggcaggagagagtggctactacttcacaaatctgtcttgcgctgtggccttcattgat
aagctggatggaccggcactaaacctcagtccagaggagttcgaaagctacatgctgaat
cggcgtgctcctcctggaggaatcaaaaggcagcagactaccagtgacacaaaccacctc
ctggaggagctacaaggccgacaggagaagctgcaccaggggatggattctcttagtgtt
cagcttcagaactgggttcaagcagttcattcccaactggatgaggcaacagcacagttt
gctttggtacagaaggaggtaacagctcaggctgcgctctcagacgttttgtcatccaca
tcttacagtgcgccgcctcaaggggatgacaaagaccagtcggtgctggtgcttgctgat
ctacatgcaggtccaaaagataccgactgttag

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