Pleuronectes platessa (European plaice): 128437943
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Entry
128437943 CDS
T09923
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03030
DNA replication
pplt03410
Base excision repair
pplt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128437943 (pole)
03410 Base excision repair
128437943 (pole)
03420 Nucleotide excision repair
128437943 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pplt03032
]
128437943 (pole)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128437943 (pole)
Enzymes [BR:
pplt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128437943 (pole)
DNA replication proteins [BR:
pplt03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
128437943 (pole)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
128437943 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
ECM10
Motif
Other DBs
NCBI-GeneID:
128437943
NCBI-ProteinID:
XP_053276228
LinkDB
All DBs
Position
4:complement(17340834..17357991)
Genome browser
AA seq
2290 aa
AA seq
DB search
MVFFKNRGGYGANRGQGGGDQDQDDGSSALKRLERSQFTDEMDARFDFDRLKEPGEKTGW
LINMHPAEILDEDKRMISAVDFYFIQEDGSRFKVALPFKPYFYIATKRNCEREVVSYVSK
KFQGKVAKLEILPKEDLDLPNHLVGLKRSYIKLSFNSMDDLLKVKREISPAVRKNREREQ
SNDAYTSMLSSALSGGHVTSNDDDARSKSISDQLDNIVDMREYDVPYHVRVSIDLKIHVA
HWYNVRYRGSAFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYMID
GQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAAMIQRWFDHVQETKPNIFVT
YNGDFFDWPFIETRAGLHGLSMHREIGFQKDNQGEYKSTQAIHMDCLRWVRRDSYLPVGS
HNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKQTEDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEQIPLEQITNFNEVCD
EIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
TCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPSLFPNGPPRAFHNLNREEQAKHEKK
RLADYCKRAYKKTHVTKKEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSS
AQDCGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIMV
KEGFTNDQYHELVDPGSLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRRLEDYGEQKSLSISTAKRLAEFLGDQMVKDAGLSCRYIIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMSSLHDLDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIFKQKKISELFTSEGKRQVAHQPLE
AGQAADIEDFGRPARPLQPAILISTKRKRASQGEDSQVESQVLELTQSWREILGPPPPMG
EEQEELLVWLRYHKKKWELQLRQRKERKKRRRMLDGEAQPVGGGVIRDGPTTGLGSFLRK
TARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAMY
KKVNRLLPRSNIVYYLYEYCVPEDMYQEHINQINADMSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKHVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHMYFYHHSQGHKALFG
LFIPSQRKASIFILDTVRSNQMPNLNNLYTAERTALLEKTTEELLPPEKHNFEVRAENDP
KAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLSAGMPVLEEFPVVPVHVLDEISYNV
LDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINSQGCYSTVCVEMDLQSLAVNTLLQ
SQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASAHASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLHSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLGS
TVVYGNFNRIILCTKKRRTDDAIGYVGYITNSIHSREIFHSLSLSFSRCWEFLMWMDPAN
YGGVKGKLPSNLLQGEEGAKQKKNKQGEGEEDGSEDEDEAEAEVEEDEETDEVEELIESN
WNIMQYLPQTASCQKYFLMIVSAYIAAVYQSMKEELRRNAPGATPVKRRGGSQASQQAVG
DLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVAGTRSVTQPSELFPVLPGSHLPLKN
PALEFIKYVCQVLSLDANIANQVNKLKRDLLRLVDVGEFSDDAQFRDPCNSYVLPEVICH
QCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESVEMALVEALQKKLMSYTLQDL
VCNKCKGVKDANMPLYCRCAGDFDLTFSIKSFSEQITVFQNIASHYNMSFLEETIDWLLL
MNPQVRQSSR
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggttttctttaaaaacagggggggatacggagcgaatcgaggacaaggcggaggagac
caggaccaggacgatggatcgtcggctctcaagcggctggagcgcagccagttcaccgac
gagatggacgcccgcttcgacttcgacaggctgaaggagccgggggagaaaaccggctgg
ctgatcaacatgcaccccgcagagatcctggatgaagacaagaggatgatcagtgctgtg
gacttttacttcattcaggaggatggaagcaggtttaaggtggccttacccttcaagcca
tatttctacatagctacaaaaaggaactgcgagagagaggtcgtctcatacgtgtcgaag
aagttccagggaaaggtggcgaagctggagattctcccgaaggaggatctagacctgccg
aaccatctagtcggcctgaagagaagctacatcaagctgtcgttcaactccatggacgac
ctcctcaaggtgaagcgcgagatctctccagcagtgcgcaagaaccgggagagggagcag
tccaatgacgcctacacgtccatgttgtccagtgccttgtcaggaggccatgtgacctcc
aatgatgatgacgcgaggtcaaagagcatctccgaccagttggacaacatcgtggacatg
agagagtacgacgtcccctatcacgtgcgagtgtccatcgacctcaagatccacgtggct
cactggtacaacgtgcggtacagaggcagcgctttcccaccagagatcgtacggagagac
gaccttgtggagagaccagatcctgttgttttggctttcgacatcgagacgaccaaactt
ccactgaagtttccagatgctgagtcagaccagatcatgatgatctcctacatgatagac
ggacaggggtttctaataacaaacagagagatcgtctctgagaacattgaggatttcgag
ttcactcccaaacctgagtatgaagggccgttcactgtcttcaatgaggatgacgaggcg
gccatgattcagaggtggttcgatcacgttcaagaaacgaagccaaacatctttgtaaca
tacaacggagacttcttcgattggcctttcattgagactcgggccggcctccacgggctg
agcatgcacagggagatcggtttccagaaggacaaccagggagagtacaagtccactcag
gccatccacatggactgcttgaggtgggtgagaagagacagctaccttccagtgggaagt
cacaacctgaaggcagcggcgaaggctaaactgagctacgacccggtggagctggatcca
gaggagatgtgccgcatggccacggaggagccacagactttggccacctactccgtgtca
gatgctgtggccacgtattacctgtacatgaaatatgttcatcccttcatctttgctctg
tgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggaccctgtgt
gaggccttgctcatggtgcaggcctttcacgccaacatcgtgttccccaacaagcaggag
caggtcttcaacaaacagacggaggacggccacgtcatggactctgagacgtacgtgggc
ggccacgtggaggcgctggagtccggcgtgtttcgcagtgacatcccctgccgcttcaaa
atgaacccggctgcattcgacttcctgcttcaaagggtcgagagaacgatgcgtcacgct
attgaggaagaggagcaaatccctctggagcagatcacaaacttcaatgaggtctgcgac
gagatcaagaagaagctgatttcactgaaggaggttccaaacaggatcgagtgccccctc
atctaccatctggacgtcggggcgatgtaccccaacatcattctcaccaaccggctgcag
ccatctgctatggttgacgaggccacgtgtgctgcctgtgactttaacaaacctggagcc
acctgtcagaggaggatggcctggcagtggagaggagaaatcatgccagccagtcgcagt
gagtttcaccggatccagcagcaactggagtcagagaagttcccgtcgctgtttcccaac
ggtccacctcgcgcgttccacaacctcaacagagaggagcaagccaagcacgagaagaaa
cgtttggccgactactgtaagagagcctataagaagacacatgtcaccaaaaaggaggaa
cgcgtcaccaccatctgtcagagagagaactccttctatgtggacactgtgagagctttc
agagatcgacgctacgagttcaaaggactccacaaggtgtggaagaagaaactgtcgtca
gctcaggactgtggagacgctgccgaggtgaagcgctgcaagaacatggagatcctgtac
gagtcccttcagctcgctcacaagtgtattctcaactctttctacggctacgtcatgagg
aaaggggcgcgctggtattccatggagatggctggcattgtgtgcttcactggagccaac
atcatcactcaagcccgagagctgatcgaacagatagggagaccactcgagctggacact
gacggtatctggtgtgtcctacccaacacctttcctgagaattttgtggtgaagacgagt
aatgagaagaagcccaaggtgaccatctcctacccgggggccatgctgaacatcatggtg
aaggagggattcaccaacgaccagtaccacgagctggtcgaccccgggtccctcacctac
aacacccggtcagagaacagcatcttctttgaggtggacggaccgtacctggccatgatc
ctgcccgcctcaaaagaggaaggaaagaagctgaagaagaggtacgctgtgtttaatgag
gacggctctctagctgagctcaagggttttgaagtgaagaggagaggagagctccagctc
atcaagatttttcaatcctcagtgtttgaggctttcctgaaaggcaccactctggaggag
gtctacgcatcggtggccaaagtggccgactactggctggacgttctgtacagcaaggct
gccaacatgccagatgcggagctgtttgaactgatttccgagaaccgctccatgtcccgg
aggctggaggactacggagagcagaagtccctgtcgatcagcaccgctaagagactcgct
gagttcctgggagaccagatggtgaaagacgctggtctgagctgtcgctacatcatctcc
cgaaaaccagagggttcacctgtcacagaaagagccattccactggccatcttccaggca
gagcccagcgtgaagaaacacttcctccgtaagtggttgaagatgtccagcctgcacgat
ttggacatccgctctatcctggattggagttattacatagagaggttgggtagtgccatt
cagaaaatcatcaccatccctgcagctctgcaacaggtgaagaacccagtgcccagagtg
agacatcccgactggcttcataagaaactcctggagaaaaacgacattttcaagcaaaag
aaaatcagtgaactgttcaccagtgagggcaagagacaggtggcccatcagcctcttgaa
gcaggccaggctgcggacatagaggacttcgggcggccagccagacccctgcagccggcc
atcctcatcagcaccaagcggaagcgagcgtcccagggagaggacagccaggtggagtct
caggtcctggagctcacccagtcctggcgagagatcctgggaccacccccacccatggga
gaggaacaggaggagctattggtgtggctgcgctaccacaagaagaagtgggagctgcag
ctgaggcagaggaaggagagaaagaagaggaggaggatgctggacggtgaagctcagcct
gtaggtggaggagtgatcagagacggccccaccaccggccttggcagcttcctgcgcaaa
actgcccgcagcattctggacatgccctggcagattgtgcagattgcagagacgagtcac
cctggcctgtacaagctgtgggctgtgattggtaatgacctccactgcatgaagctcaac
atcccccgggtcttctacgtcaatcagaaagtccccaaacaggaggagggagccatgtac
aagaaggtgaaccggctgctgcctcgctccaacattgtgtactacctctatgagtactgt
gtaccagaggacatgtaccaggagcacatcaaccagatcaacgcagacatgtctgcacca
gacatcgaaggagtctacgaaacacaggtccccttgctgtttcgggccctggtgcagctt
ggatgcgtgtgtatggtcaataaacacgtggtgagggatctggccggcagggaggcggac
acctttgatctggagcatctagagatgaggtctctggcccagttcagctacctggagcca
gggagtgttcgtcatatgtacttctatcatcacagccagggacacaaggctctgtttgga
cttttcatcccctctcagcgcaaagccagcatcttcatcttggacacggtgcggagcaac
cagatgcccaacctgaataacctttacactgcagaacgcaccgccctcctggagaagacc
accgaggagctcctgcctccagagaaacacaacttcgaggttcgagctgaaaacgaccca
aaggctatttaccgcgcactgcagcggattttgctcaactacaaggaggagcgtcggggc
cccaccctcatcgctgtgcagtcaaactgggagctgcgtcggttgtcagcggggatgccg
gtgcttgaggagtttcctgtcgttccagtgcacgtgctcgacgagatcagctataacgtg
ctggattggcaacggcacggtgcccggcgcatgatccgtcactacctcaacctggacagc
tgcctgtcgcaagctttcgacatggccaggtattaccacttgcctgtggggaacttgcct
caggatgtgtccatcttcggttcagacttgttcctggcgagacatcttcggaaacacaac
cacctgctgtggctgtcacctacagccagacctgacctcgggggaaaggaggctgatgac
agccgtctggtcatggagagcgacgacagaggttctgtggagatcaactctcaaggatgc
tattccaccgtttgtgtggagatggacctgcagagcctggcagtgaacaccctcctccag
tcgcagcatgtcaacgacatggagggtggagccagtctgggcgtcagtttcgatgtgatc
cagcaggcctcgctggaggacatgatgtcaggaaatcaaggagcaagcgctcatgctagc
tatgatgagactgctctctgctccaacaccttcaggatcttgaagagcatggtggtggga
tgggtcagggagatcacccagtaccacaacgtgtacgccgacaaccaggtgatgcacttc
taccgctggctgcactccccgagttctctgctctacgaccctgctctgcatcgcaccctg
cacaacatgatgaagaaggtgtttctacagttggttgcagagtttaaacgtcttggctca
actgtggtgtacggaaacttcaacaggatcatcctgtgtactaaaaaacggaggacagat
gatgcaatcggctacgtggggtatatcactaacagcatccactccagagaaatcttccac
tctttgtccttgtccttctcccgctgctgggagttcctgatgtggatggacccggccaac
tacggcggcgtgaaggggaagctgccctccaacctcttgcagggagaggaaggagccaaa
cagaagaagaataaacaaggggagggtgaagaggacggcagcgaggatgaagatgaggcg
gaagcagaagttgaggaagatgaagagacggatgaggtggaggagctgattgagagcaac
tggaacatcatgcagtacctgcctcaaacggcctcctgtcagaaatacttcctcatgatc
gtctcagcctacattgcagctgtgtaccaaagtatgaaagaggagctgagacgtaatgct
cctggagcaacgccagtaaagagacgtggaggcagccaggcttctcaacaggcagtggga
gacctgagtgctcttcctggaatgatctccttctcccaggaatacgtgtccagtgagctg
acacagaacttcttcaccatcactcaaaagatccagaagaaagttgcgggcaccaggagt
gtgacgcagccctcagagctgttccctgtcctgcctggatcccacctgccactcaaaaac
ccagcactggagttcatcaaatatgtctgccaggtcctctcactggacgccaacatagcg
aaccaggtgaacaagctgaagagagacctcctgcgtcttgtggacgtcggcgagttttca
gacgacgctcagttccgtgatccctgcaactcctacgtcctaccagaggtcatctgccac
cagtgcaatttctgtcgtgacctcgacctctgcaaggacccatctgtggcgcaggacggg
tcggtcttgcctcagtggttctgctccaactgccaggcccagtacgagaccgagtctgta
gagatggctctggtagaagctctgcagaagaagctgatgagctacaccctgcaggacctg
gtgtgtaacaaatgtaaaggggtgaaggacgccaacatgcccctctactgccgatgtgct
ggagactttgacctcactttctcaatcaagagcttctctgagcagatcacggtgtttcag
aacatagcttcccactacaacatgagcttcctggaggagaccattgactggctgctcctg
atgaatccacaggtccgacagagctctcgctga
DBGET
integrated database retrieval system
