Pleuronectes platessa (European plaice): 128438084
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Entry
128438084 CDS
T09923
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03420
Nucleotide excision repair
pplt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128438084 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
128438084 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128438084 (ercc8)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128438084 (ercc8)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128438084 (ercc8)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
128438084 (ercc8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR55
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_SCAP
Beta-prop_WDR75_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
128438084
NCBI-ProteinID:
XP_053276435
LinkDB
All DBs
Position
4:complement(21462004..21472675)
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AA seq
401 aa
AA seq
DB search
MLGFLTARQTGLDDPLRLRRAESTRRVLGLELNPDRDVDRIHGNGINSIDIEAVEGRYML
SGGADGVIVIYDLENFSGKPQYTCKSVCTVGRSSRYVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFEFEGNVYSHHLSPIARKHSLIAVGTKEPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEHILATASADSKVKVWDVRRASGCLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTGDGLYILTTGTDDRMRLWNSATGENTLVNYGKVSNESRKKLQFTV
SRGCSPEFVFVPCGSSVAVYALHTGKLVSMLRGHYNNVDCCEFHPDYQELYSGGKDCNVL
AWVPVLHPPAVEEESESTNTRAANPSSGNPALQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgctggggtttctgacggcgaggcagacgggactggatgatcctctgagactgcgacga
gcggagtcgacgagaagggtcctaggtctggagttgaatcctgacagagatgtggaccga
atccatggaaatggcatcaactctattgacattgaagcagtagagggcagatacatgtta
tctggaggtgcagatggagtgatcgttatctacgacctggagaacttcagtgggaaacca
cagtacacctgcaagtccgtctgtacagtcggcaggtctagcaggtatgtccacaaattc
agtgtcgagacagttcagtggtatccttacgacacaggcatgtttgtctccagctccttt
gataagaccatgaaggtctgggacacagagacactgaagcctgctgaggtatttgagttt
gagggcaacgtctacagccaccatctatcccccatcgccaggaagcacagtctcatcgca
gttggcacgaaagaacctaaaatccagctgtgtgacctgaagtctggttcacggattcac
gttcttcagggtcacagagcagaggtactgtctgtgcggtggtcccccagatacgagcac
atcttggccactgccagtgcagacagcaaggtgaaagtatgggatgtacgtcgggcctct
ggttgtctcttcactctggaccagcacaacggagacaagtcgaaagcctcctctgaggca
gtaaacacagcccataatggcagagtgaatggcctgtgcttcactggggacggcctctac
atcctcacgactgggactgatgatcgcatgagactgtggaacagtgccaccggagaaaac
acgctggtgaactacgggaaagtcagcaacgagagtcgtaaaaagctccagttcaccgtg
tcgcgaggctgcagcccggagtttgtgtttgttccatgcggcagctccgtcgcagtctac
gccctccacacaggaaagctggtcagcatgctcaggggtcactacaacaacgtcgactgc
tgcgagttccacccagactaccaggagctgtacagtggaggtaaagactgtaacgtccta
gcttgggttcctgttcttcaccccccagccgtggaggaagagtcagagtctacaaatacg
agagcggccaacccgtcttcagggaaccccgccctgcaggatgcatggagcagtgatgaa
gattga
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integrated database retrieval system
