Pleuronectes platessa (European plaice): 128438444
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Entry
128438444 CDS
T09923
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pplt02000
]
128438444 (tmc1)
03037 Cilium and associated proteins [BR:
pplt03037
]
128438444 (tmc1)
Transporters [BR:
pplt02000
]
Other transporters
Pores ion channels [TC:
1
]
128438444 (tmc1)
Cilium and associated proteins [BR:
pplt03037
]
Other cilia and associated proteins
Stereociliary proteins
128438444 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
Piezo_TM1-24
UPF0542
Motif
Other DBs
NCBI-GeneID:
128438444
NCBI-ProteinID:
XP_053276997
LinkDB
All DBs
Position
4:complement(12381987..12390832)
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AA seq
964 aa
AA seq
DB search
MPRAGLITAENNSDIDLEFTGDEDEVSTFQEELERGRHRGRRRDGDREKKKRGNRRRKGA
SKETVEGEEESQNRLEKRERRRKRAKRHQEARGRERDEEEQAKIKSGKKAKTRKKVKNEK
TRKVEEKEEEEGEAGERNAKGKMKHGGAKREEKKEDGGKHTVKEKAQEVKKKKHKTVVET
SSEEEMSEEANEDNEEEEKELRPESLSPEELENLKEAVDERKKLIQSLRGKPWPMKKKLV
TLRESQEFVEKYEGALGKGKGRRLYAYKVMMSKKWMKFQRDFENFKTVCIPWEMKIKEIE
SHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGSISRKTVPRAEEASAM
DFAVLWDCGGYAQYSVLFYGYYNSQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMAR
NSNESGGGDDNSFNFSWKMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESHKDDNI
HLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLDTHTWWERNEVNMVMSLLGM
FCPMLFDVISALENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEEMIIKYN
ISMWEASFYNSSVSGNSTAPPVIIQPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLI
GDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLSLIFNQGMIWMGAFYAPCLPALN
VLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPS
FDCGPFSGKKRMFDVIAETLESDFPAWFGKVFSSASNPGLVLPFILLMVLAIYYLQSTSK
SYKEVNVELKKKLQAQNEENKKKNKRAALKAQTDLEEARNATSQTAQQQQETDGDEKHAS
RQRLHHGTTGHNPPPPDHERRPLATRAPVPRPYHHDNHGTPGYLPGFSQQSEPRLYRVPS
LQRH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagccggtctgatcaccgctgagaacaacagtgatattgatctggagtttaca
ggtgacgaggatgaagtgtccacttttcaagaggagcttgagaggggaagacacagaggg
aggagaagggatggtgacagagagaaaaagaagagggggaataggaggagaaaaggagca
tctaaagaaacggtagaaggggaagaggaatcccagaacaggcttgagaaaagagaaagg
aggagaaagagagcaaaacgccatcaagaagcaagaggacgagagagggacgaggaggag
caggcaaaaataaaaagtggtaagaaggcaaaaacaaggaagaaggtcaaaaatgagaaa
acaagaaaagtggaggaaaaggaggaggaggaaggagaggctggagaaagaaatgccaag
ggaaaaatgaagcatggaggtgccaaacgtgaagagaaaaaagaagatggaggtaaacac
acagtaaaggagaaagcacaggaagttaagaagaaaaagcacaagacagtagttgaaaca
agttcagaggaggagatgagtgaggaagccaatgaagacaatgaggaagaggagaaggag
ttgaggccagagtctctatcgccggaggaactggagaacctgaaggaggcagtggacgaa
aggaagaaactgatccagagtctgaggggaaaaccctggccaatgaaaaagaaacttgtc
actttacgagagtctcaggagtttgtggagaaatatgagggagctctggggaaagggaaa
ggcagaaggctctatgcttacaaggtcatgatgtccaagaaatggatgaagtttcaacgg
gactttgaaaacttcaaaactgtttgcattccatgggagatgaaaataaaggagattgaa
agtcattttggctcctcagttgcttcttactttatcttcctgaggtggatgtatggcatc
aacatgatcctgtttggtcttacctttggcctcgtgatggttccagaggcattgatggga
aggccctatggcagcatctcaagaaaaactgtccccagggccgaggaggccagtgccatg
gactttgctgtcttatgggactgtgggggttatgctcagtattccgtccttttctatgga
tactataacagccagcgtgccattggctggcttaagttccgtatgcctctgtcgtacttc
ctggtcggtgtgggaactgtggcctacagctacatggtggtcataagaacgatggcccgc
aattcaaacgagtcggggggtggagatgataacagctttaattttagctggaagatgttc
accagctgggactacctgataggaaaccctgaaactgcagacaacaagtttgcctccatc
accaccagtttcaaggaggcgatcttagaggagcaggagagtcacaaggacgacaacatc
catctgacccgttttctgcgggtgctggccaacttcctggtcttgtgctgtttggcagga
agtggatacctcatctactttgtagtgcgtcgctctcagaagtttgccctagacggactc
gatactcacacctggtgggaaaggaatgaggtgaacatggtcatgtcactgctggggatg
ttctgccccatgctgtttgacgtcatcagcgccctggagaactaccacccgcgtgtcgcc
ctgcagtggcagctgggtcgcatctttgccctcttcctgggaaatctctacaccttcatc
atcgcattgatggacgagatcaacctcaaaagggaggaggaaatgatcataaagtataat
ataagcatgtgggaagccagtttttacaacagctcagtatcaggaaacagcactgctcct
cccgtcattatccaacctgctgacgtgcccagggggccctgctgggaaaccatggtgggg
caggagtttgtccggctgatcatatctgataccatgacaacctacatcacgctgctgatc
ggggatttcctgagagccgtgctcgttcggtttctcaactactgctggtgttgggacctg
gaggctggatttccttcctactcggagtttgatgtcagtgggaacgtcctgagcctgatc
ttcaatcaaggaatgatatggatgggtgcgttctatgccccctgtctccctgccctgaac
gtcctccggctccatgtgtccatgtacctgcagtgctgggcagtgatgtgctgtaacgtg
ccacaggaaagagtcttcaaggcctccggatccaacaacttctacatggccatgttgctg
gtcatcctcttcctgtccactctgcccgccatttacaccatcgtcaccattcctccttcc
tttgactgtggacccttcagtggtaaaaaacgtatgtttgatgtgatcgctgagacgctg
gagtccgacttccctgcctggtttggtaaagtgttcagctctgcttctaaccccggactg
gtgctgcccttcatactgctcatggtactagccatctattacttgcaatccacatccaag
agctacaaagaagttaatgtggaactgaagaaaaaactacaagcgcaaaatgaagaaaac
aagaagaagaacaaacgagcagcgctgaaggcacaaacggatctggaggaggccagaaat
gcaacatcacagactgcacagcaacaacaagagacagatggagacgaaaaacatgccagc
cgtcagaggcttcatcatggtacgaccggacacaaccctccgcctccagaccacgaacgg
cgacctctggccaccagggctcccgtccccaggccctatcaccacgacaaccacggcact
cccgggtacctgcctgggttctctcagcaaagtgaacccaggttgtacagggtgcccagc
ctgcagagacactga
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