Pleuronectes platessa (European plaice): 128438468
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Entry
128438468 CDS
T09923
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128438468
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pplt01009
]
128438468
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pplt04515
]
128438468
Protein phosphatases and associated proteins [BR:
pplt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128438468
Cell adhesion molecules [BR:
pplt04515
]
Cadherins
Protocadherins
128438468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Ig_CLSTN
Ig_Cad99C_N
Cadherin_2
Epiregulin_C
TEX50
Motif
Other DBs
NCBI-GeneID:
128438468
NCBI-ProteinID:
XP_053277030
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All DBs
Position
1:complement(24093136..24097397)
Genome browser
AA seq
889 aa
AA seq
DB search
MIDSRHHGLRKRGGLWGLCILLLYTSPLSCFAHFSQAKELIYKIKEGLPRGTFIGTIGVD
LNLDFSVEPPYLFNLPQKKVSGEYVNLNNTTGELYTSATEIDRETLCPDNSEGRGCVLSL
DVFVLPQQHFQLIKVKIVIEDVNDNRPKFPTDEIYLSVPENTPINARYAVEQSAVDPDLG
AHGVQTYWLVNDFGVFTLDVEENEGGELTPFLIVTEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESHINVTLHGNTSKGAHLARLHAFDPDLGANAQISYAYS
ERVPRDTRSLFHLDRITGVIKLAGKIDTATSTFYKLTVLANGPGCIPAVASVTVHIIKVV
TGPPAVIPRYIAPEKDGVVTIKESEPVFSPIAFFTVKNIDLNQRVDCLLEGTGPFRLGPY
QQFKNEYLLETTEQLDYENIQEYELIVVAKNTGGLVIKTFLKVQVSDENDNAPVFQDSLV
EISVEENNAPNTFLTQLQASDQDSDSRGEVVYLLGGDTPGIFAIDRVTGVLTVTTSLDRE
EKEKYRFIVRAVDQGTPRRESIATVVVTVQDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSMDREQQGTYTLWIEAADGGEP
ALSCVTMVTVLLLDVNDNPPIVLFPQSNQSYMLVLPNTLPGTSITEVYAVDKDTGMNAVI
AYSIVKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFF
VNETVSNESYIQSLLTREADIEIEERPWYIGQMTEGPERYERFPCQPVLIVLSVSCLGLL
FSVVALTAYICCKRFKKHRKKISEVEIPLKIKKDCMQVGNRKLRQISNI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagccgacaccacggtcttagaaaaagaggaggactatggggattgtgcatc
ctcttgctttacaccagccctctctcctgttttgcacatttcagccaagcgaaagagctc
atctataagataaaggagggattacccagagggaccttcatagggaccatcggagtagac
ttaaatttggatttttctgttgagcccccctatttattcaatctcccacaaaagaaggtc
agtggagagtatgtgaatctaaataataccaccggagagctttacacatctgccacagag
atcgacagggagaccctctgtcctgataactccgagggacggggatgtgtcctgtcgctg
gatgtgttcgtgttgcctcagcagcactttcagctgatcaaagtcaagatcgtcatcgag
gacgtgaacgacaacaggccaaagttccccacggatgagatctacttgtctgtccccgaa
aacacaccgattaacgctcgctatgcggtggagcagtctgcagtggacccggacctgggc
gctcacggagtgcagacctactggctggttaacgactttggcgtgttcacactggacgtt
gaggagaacgaggggggggagctgacacctttcctcatcgtgacagaagccttggacaga
gagactcaggctgaatacattacggatatcatcgcagaggatggcgggacccctcctctt
ctcggcgctgctactttaaagattgtcatcacagatgtgaacgataactgcccccaattc
acagagtcgcatattaatgtcactctgcatgggaacaccagcaaaggggcccatttggca
cgattgcacgcttttgaccctgaccttggtgctaatgctcagatcagctacgcttacagc
gaacgtgtgccaagggacaccaggagcttgttccatttggacagaatcacaggggtgatc
aagcttgcagggaaaatagacactgccacatccaccttttacaaactcacggttctggct
aatggacctggctgtatccctgctgttgcctctgtgactgtccatatcatcaaagttgtg
accggaccacctgctgtcataccccggtacatcgcaccagaaaaggatggagtggtgaca
ataaaggagtctgagccagtgttttctccaattgctttttttactgttaaaaacattgat
ttgaaccaaagggtggactgtcttctggaagggactggtcccttcaggctgggcccctat
cagcagttcaaaaacgagtacctgctggagactacggagcaactggactatgaaaacata
caggagtacgaactgattgtggttgctaagaacactggagggcttgtcatcaagaccttc
ctcaaggtgcaggtttcagatgagaacgataatgcaccagtgttccaggattctttggtg
gaaatatctgtggaggaaaacaacgcaccaaacacgtttctaacacaacttcaggcctca
gaccaggacagcgacagccgaggggaggtcgtctacctccttggaggtgacacccctggg
atctttgctatcgatcgtgtgacaggagtcctgaccgtgaccacatcgcttgaccgggag
gagaaagagaaataccggttcatagtgagagcagtggatcaggggacgcccaggagggag
tccattgcaactgtggtggtgacggtgcaggatcggaacgacaacagtccgcgcttcatc
aacaaggactttactttctttgttccggagaacttcccggggtacggtgagatcggagtc
ctctcggtgacggatgctgatgcaggagaaaatggctgggtggccctttccatcctgaac
ggcagtgacatcttcatgatagacacagggcgcggagccctgagggccaagacatcaatg
gaccgtgagcaacaagggacatacacattatggatcgaggccgctgatggtggagaaccc
gcactttcctgtgtcaccatggtgaccgttttgttgttggatgtaaatgacaacccgccc
attgtcctctttcctcagtccaaccagtcctacatgctagtgctcccgaatacattaccg
ggaacatcgatcacagaggtgtatgctgtggataaggatacgggcatgaacgctgtgatc
gcctatagtatcgttaagaggaaaggtggcgagccagggtccttcgccatcgacccagaa
acaggaaatatcacattaaagagggaactcagcaaccggggcctctacagccttctggtg
aaggtcagtgatcatggtcagcctgaaccgctttactcaacagtaatggtcaacttcttt
gtgaatgaaacagtgagcaatgagagttacatccagagtctgctgaccagggaggctgac
atagagatagaggagaggccttggtacattggccagatgacagaggggcctgagcggtac
gagcggttcccttgtcagccggtcctcattgttctttcagtgtcctgcctggggctactc
ttctccgtcgttgctctgacagcttacatatgttgcaagaggttcaaaaagcacagaaag
aaaatatcagaagtggaaatacctttaaaaattaagaaggactgcatgcaggttgggaac
agaaagctcaggcaaatctctaacatctaa
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