Pleuronectes platessa (European plaice): 128438504
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Entry
128438504 CDS
T09923
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
pplt
Pleuronectes platessa (European plaice)
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128438504
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Meiosis-specific proteins
Others
128438504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
128438504
NCBI-ProteinID:
XP_053277060
LinkDB
All DBs
Position
4:25021289..25033913
Genome browser
AA seq
1519 aa
AA seq
DB search
MLISRYRCEHGGCLPPNIFSTVRYKAVDYEFETTTSLKVMMNLLALPAPYLPDTHLYPHS
GRLPEVTYRTPWIRGKVISTCKLFVSGSVLDDLGGTKQPMNFTERFNVSLNEANRDVEKI
PSSNPDSLETEDEAVCTLTDSQVNGSCQEMFFKLTTDQMKPGNQNQDLLLPEELIAVDYL
PQFKSELPTLKTKLSRLRTLPVADPLLSSAGDTISEDTIFRRCASYEKAPGSCASDAHMC
ANIHEDFAKELLMKEESLLLPVVVDTFKMTTEKCYSFSSICGLLDVAPELLDEQLPVLDM
LHQVSLSDATVSVDKFQCDSPEKLKQEGKINEGLIDSDLIERMMLPTELELDVSLTLSPK
TSPTRLCPSTSQLEKEELSPLCRRSLVSVRAHTEMEKALWKAEKHPTFVVGFLLAEPETP
EPAVDFQPLSEAVKVLKLEKQSFVTAAAELRSQMSKGTSQVYLCSNCELTENLRSELPST
REEKMEDFKKLSPDHELFRTFLTSPANKTQSPHMKKEETSLHTEAATEHFPLQQQSHAET
SQNKLRIHNVNMNNKEVKPATLTLSKPAVVFNTKEEMSNVRFFEVTALSSARKNNRDTGV
YDCETEQSVHAPKQIVSSPPIIRDNHRPQQVTRRPPEKELDPLSTFMALRSQQMAPVTAA
PQSSASSPAPEVDWVTPPSEPHTPPQLIQRSDRRPMYMSGSVSGSVTREQEAAGQGNGQV
ISHPVSQSDPQEAQESRVIQVQATDSQQRAYVELLTIAQPCLNSARELGLNFLVWGDFSC
LAPDHTHFLLKQQERVLCRKHAQSTELIRDQELLFSKVALIHVLVTFKELLLKCGLSTGL
AYLTQAAEKCSEQILQQLVKRMHIIFFLSHKNQEPNLKVQELQQLLAEWLHSRKGHNNTD
KILVILSVDSDDSRSTIINSLSRVAGAVVTSVHPEENKTKLNGASVVSSVCDSGCVVVYE
QHIGPDFPWNSFCLVVEFDHPGQSPWSTVCRERSISHLSFNTSISDSEKGKDPWCLEDNV
PYVVLVTEEFLNRPLLLKTLESEFNITVLERSHCPSLQMLGGTHHYAVITVDESTAIIIQ
DQDELDQEQASEGLVMRLTALCLQYNCCWVILHCPDIQGGGFSSEAFSNLLLVYSSLVLF
GTKSKDLDVKVLIVSEVCEIAKWISRICFHSLMSSDRDPLSFLNRDWLTVIPSQEEKCLL
QFPCVNPLVSQLMLRRAPSLQWLLGASLPQLSELLPEVPHKVLKLFSDTTSLFTLTTDPN
HLESQAVVTETNQQPPTPPRPEAFCSQTTTSFLFGAESAETSFYERDPDPTVQDDSTDFT
FDLSCSFGSPDVHLQSSWTGGKRRTEEGTFSGLKSRAGAVGRVVRRVNDQWTLGPPSNHS
GFTNYLHTADDSPLELDSTFRHSPQQPPDVSTQISAFSTICGDFQHPNNLHITCSLSPPT
AGVTSWGRGESNDSFVSSIGGMKATSPQYGSRCWIGRERKRSGEAAGLSGTVLTPLKKGR
LSYERVPGRSDGQTRLKLF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgctaatctcccgctacaggtgtgaacatggcggctgtttacctcctaacatcttctcc
actgtcagatataaagctgtggactatgagtttgagacgaccaccagtttgaaagtcatg
atgaacttgctggcccttccggcgccttacctgcccgacacccacctgtaccctcacagt
ggcagactgcctgaagtcacctacaggacaccgtggatcagaggaaaggtgatctccacc
tgcaaactctttgtcagtggttccgtgcttgacgacctgggaggaacaaagcaacctatg
aatttcacagagaggtttaatgtgagtctaaatgaggcgaacagggatgtggagaagata
cccagctctaatcctgactcacttgaaactgaggatgaggctgtctgcactttaacagac
tcacaggtcaatggttcatgtcaagaaatgtttttcaagttgacaactgaccagatgaaa
cctggaaatcagaaccaagatctcctcctgcctgaagagctcattgctgtcgactacctg
ccacaatttaagagtgaattacccacattgaaaaccaaactgtcaagactgaggacactt
cccgtggccgaccctctgctgagctcggcgggagacaccatctctgaggacacaatattc
aggagatgtgcgtcttatgagaaagctcctggttcgtgtgccagtgacgctcacatgtgt
gcaaacatacatgaggactttgccaaagaattgcttatgaaggaagagtctctgctccta
ccggttgttgtggacacttttaaaatgaccacagaaaagtgctactccttttcaagcatt
tgtggtcttttagatgttgctcctgaactattggatgagcaacttccagtcctggatatg
cttcatcaagtttccctttcagatgcaacagtgtcagtggataaattccaatgcgactca
ccagagaagcttaaacaagaagggaagattaatgaaggcctgatagactcagatctcata
gaacgtatgatgcttccaactgaactggagctggacgtgtctctgacgctgtctccgaag
accagtcccacccgtctgtgtccgtccacttctcaactcgagaaggaagagttgtcaccg
ctctgcagacggtctttagtgtcagtgagagctcacaccgagatggagaaggctctttgg
aaagcagagaagcatccaacctttgtggtgggatttctgttggcagagcctgaaacacct
gaaccagctgtggacttccagccgctgtctgaggctgtaaaagtccttaaattagagaag
cagagctttgtcactgctgctgctgaactgaggtcacagatgagcaaaggaacctcacag
gtgtatttgtgcagcaactgtgagctcactgagaacctgaggtccgagcttccctccacc
agagaggagaagatggaagactttaaaaagctgtcacccgaccatgagctgtttcgaacc
ttcctgacgagccctgcaaataaaactcagtcccctcacatgaagaaagaggaaacttct
ctccatactgaagctgccacagagcattttcctcttcaacaacaaagccatgctgaaaca
tctcagaacaaactccgtatacacaatgtcaacatgaacaacaaggaagtaaaacctgcg
acactaactctttcaaaaccggccgttgtcttcaacaccaaggaggaaatgtccaatgtc
aggttctttgaagtcactgccctgtcttctgctcgtaagaacaacagggacacaggcgta
tatgactgtgagacagagcagagtgtccacgctcctaagcagattgtgtcctcaccacca
atcatcagagacaaccacagacctcagcaggttaccagacgtcctccagagaaggaactt
gaccctctctctaccttcatggcactcagatcccagcagatggcgccagttactgcagcg
cctcagagctcagccagttctcccgcaccagaggtggactgggtaactccaccgtctgag
ccgcatactcctccacagctgatacaaagatcagacaggaggccaatgtatatgagcggt
tctgtgtcaggaagtgttaccagggagcaggaagctgctggtcaagggaacggtcaagtc
atcagtcatcctgtcagccagtccgaccctcaggaggcacaggagagcagagtgatacag
gttcaagctacagacagccagcagcgggcctacgttgagctgctgaccatcgctcagccc
tgtttgaactctgccagagagctggggctcaacttcctggtgtggggagacttcagctgc
ctggcccccgaccacacacatttcctcctcaaacagcaggagagggtgctctgcagaaag
catgcacagagcacagagctcatcagagatcaggagctactcttcagcaaggtggctctg
attcatgtgctggtgactttcaaggagctgctgctgaagtgcggcctcagtactggattg
gcgtacctgactcaggcagctgagaaatgttcggagcagattctgcagcagctggtgaag
aggatgcacatcatcttcttcctcagtcacaagaaccaggagcctaacctcaaagtgcag
gagctgcagcagctgctggctgaatggctgcacagcaggaaaggacacaacaacacagac
aaaattcttgtcatattatcggtcgactctgacgacagcagatccacgatcatcaacagc
ttgagccgagtggccggtgcagttgtaacgtcagttcatcccgaggagaacaaaaccaaa
ctgaatggtgccagcgtggtcagcagtgtttgtgacagtgggtgtgtagtggtgtatgag
cagcatataggccccgacttcccctggaacagtttctgtctggtggtggagttcgaccat
ccaggtcagtctccatggtccacagtctgcagggagaggagcatcagtcacctctctttc
aacaccagcatctctgactctgagaaggggaaagacccctggtgcctggaagacaacgtt
ccttatgttgtgttggtgactgaggagtttcttaaccgtccactgctgctgaaaacactt
gagtcagagttcaatataactgtgttggagaggagtcactgtccgtccctgcagatgctc
ggagggactcatcactatgctgtgatcacagtggatgaaagtacagctattatcattcag
gatcaggatgaactggatcaggaacaagccagtgagggactggtgatgaggctgactgct
ctctgtctccagtacaactgctgctgggtgatcctgcactgcccggacatccagggagga
ggattttccagcgaagccttcagcaacttgttgttggtttattcgtctctggtgctgttt
ggaacaaagtccaaggatctagatgtcaaggtgctgatagtgtccgaggtttgtgaaatt
gccaagtggatcagtcggatctgcttccacagcctgatgtccagtgacagggatcctctc
agcttcctgaacagagactggttgactgtgatcccttcacaggaggaaaagtgtctgttg
cagttcccgtgtgttaaccctctggtgagtcagctcatgctgaggagagctccgtcctta
cagtggctcctgggggcctctctgcctcagctcagtgagctcctccctgaggtgccacat
aaagtcctcaagcttttcagtgacaccacctccctgttcacactgaccacagacccgaac
cacctcgagtctcaggcagtcgtcactgagactaaccagcagccccccaccccccctcgt
ccagaggcgttctgcagccaaaccaccaccagcttcctgtttggagctgaaagtgcagag
accagcttctatgaacgagacccagacccgacggtgcaggacgacagcaccgatttcaca
ttcgacctgagttgttctttcggcagcccagatgttcacctgcagagcagctggacaggc
gggaagaggcggacagaggaggggacgttttctggattaaaaagccgagccggagcagtg
gggagagttgtgaggagagtaaacgaccagtggacacttgggcctccatcgaaccacagc
ggcttcaccaactacctccacactgctgacgacagtcctctcgaactggactccacgttc
agacacagcccccagcaaccacctgacgtcagcactcaaatatctgcattctctacaatc
tgcggcgacttccagcatcctaacaaccttcacatcacctgcagtctgagcccccccact
gcaggggtcacatcgtggggaagaggtgaaagcaacgacagcttcgtctccagcatcgga
gggatgaaagcaacttcccctcagtacggctcccgatgctggatcggacgagagaggaag
aggagtggagaggctgctggtttgtctggaacagtgttgactccactgaagaagggaagg
ctgagctacgagagggttcccggcaggagtgacggtcagaccaggctgaagttattttaa
DBGET
integrated database retrieval system
