Pleuronectes platessa (European plaice): 128438544
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Entry
128438544 CDS
T09923
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128438544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pplt03036
]
128438544
Chromosome and associated proteins [BR:
pplt03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
128438544
REST complex
128438544
Heterochromatin formation proteins
Other heterochromatin formation proteins
128438544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
128438544
NCBI-ProteinID:
XP_053277104
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Position
1:complement(27896173..27912137)
Genome browser
AA seq
1327 aa
AA seq
DB search
MASGPFDYVYTMKRRVDDQEPIFAPQQQPSRRPPVQGIAESFQHRALAPAPTVIEAATDT
MQPSTGIQYSLPQGYQVPTMPQSTSGHGHNTAPHVGPHTHSLAVQSQGPAVVQGHVHPPA
PITSPQGQQQFQRLKVEDALSYLDQVKLQFGNYPQVYNDFLDIMKEFKSQSIDTPGVINR
VSQLFKGHPDLIMGFNTFLPPGYKIEIQTNDLVNVTTPGQIHYITPHGISVQSMPIGPAP
SQPVSHHQHQNLPQAGPQTATTTTTTTTPPVPAQPTPNKTSKPIQSPAHTPTSQPNPSIP
SYASPRSPTVQPHTPVSSTPSGGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKSFLE
ILHTYQKEQRNAKEAGGNYTPTLTEQEVYTQVAKLFKNQEDLLSEFGQFLPDANSSLLLG
KVAPDRAESVRNDHGGTVKRPLLNNKQRLSQNGLPIRRPAGVGATPPVKKKPKIMGKDHS
SEVSKHSTSTETMFFEKVKKALRSTEAYDNFLRCLQIFNQEVISRAELVQLVIPFLGKFP
ELFTWFKNFLGYREFSHGEPSHAESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQ
PKCTGRTPLCREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNL
STIRALESVQRKLSRMSAEEQLRFKLDNTMGGSSEVIHRKAIQRIYGDKANDIIDGLKKN
PAASVPIVLKRLKIKEEEWREAQRGFNKIWQEQNEKYYLKSLDHQGINFKQNDTKVLRSK
TLLNEIELLYDDRQERAAEEAPAPPVSGPHMTLTYDDSQILEDAAALIIHHVKRQVGIQK
EDKYKIKQIIHHFIPDLLFAQRGELSDVEDEDEEEEEDLEMDQDSPKKHNGLPGSSPSKS
KLLFSNPAAQKLRGTDEAYNLFFVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDGRER
EWEREELGVKREKSENPAIQLKMKEPMDVDVDDYYSVFLEMVRNLLDGNMEPAQYEDSLR
EMFTIHAYVAFTMDKLIQSIVRQLQHLVTDDVCARVTDMYLSECANKATGGTLSTQTSRS
TAEGVYQRKAEQLMSDENSFKLMFVKSRGSLSMTMELLDTEDDNSDEPAESERWSDYVSR
YLNSDSASPELREHLAQKPVFLPRNLRQIRKCQRGWKQLQQQERKTKAPADTSQDGHRAL
RMQCMFKLNSYKMVYVCKSEDCMYRHTALTRAHQSHQRVNQRLHRRFQAKVDTWAKEHVT
SDMASSSQKWLMGEEQEDLMSCTTTRCPEVLHYLNVNKYRVKYRTLQRERKKHGSDVVTQ
QTARDEF
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggtccctttgactatgtgtatacaatgaagaggcgcgtggatgaccaagaa
ccaatatttgcaccccagcaacagccatcacgtcgtcccccagttcaaggtattgcagag
agcttccagcaccgggccctcgccccggcccctactgtgatagaggcagccacagacacc
atgcagccgtccaccggcatccagtattctctcccccagggctaccaggtgcccacaatg
ccccagagcacaagtggacatggacacaacactgcaccacatgttggtccccacactcac
agtctggcagttcagtcccagggccctgcagtggtccaaggccacgttcatccacccgct
ccaataacctctcctcaaggacagcagcagtttcagcgtctgaaggttgaagacgccttg
tcctatctggatcaagtgaagctgcaatttgggaattatccacaggtttataatgatttt
cttgacatcatgaaagagtttaagtcacagagcattgacactcctggagtcatcaaccgc
gtgtcccagctcttcaagggtcacccagacctcattatgggctttaacactttcctgccc
cctggatacaagattgagattcaaaccaacgatctagtcaatgtgaccacgccgggtcag
atccactacatcaccccgcatggtatttctgttcagagcatgcctataggtccagcaccc
agccagcctgtaagccatcaccagcaccagaatctgccacaggctggcccacagactgcc
accaccaccaccaccacaaccaccccacctgtcccagcccaacctactccaaataaaacc
agcaagccaattcagtctccagcccatacacccacgagccagcccaatccatccatccca
tcctatgcctcgccgcgctcaccaaccgttcagccccacactcctgtgagcagcacgccg
tctggggggccaccgctccagaacaaccagcccgtggagttcaaccatgctataaactat
gtcaacaagatcaagaaccgcttccagggtcagccagacatctacaaatccttcctggaa
atccttcacacataccagaaggagcagagaaatgctaaagaggcagggggtaactacacc
cccacactgactgagcaggaggtctacactcaggtggcaaagctcttcaagaaccaggag
gacctgctctcagagtttggacagttcctgcctgacgcaaacagctcattgctgctgggc
aaggttgcaccagacagggccgagtctgtgcgtaatgatcacggtgggacagtaaagaga
cccttactgaacaacaagcaaaggctgagccagaacggcctccccatcagaaggccagca
ggagtgggagccacgccgcctgtcaagaagaaacccaaaataatggggaaggaccacagc
agtgaagtcagcaaacacagcaccagcactgaaaccatgttctttgagaaggtgaagaag
gctcttcggagcacagaggcttatgacaacttcctccgctgtctgcaaatcttcaaccag
gaagtcatttctcgcgctgagctggtccagttagtcatcccattccttggaaaattccca
gagctctttacttggttcaaaaacttcctgggctaccgagagttcagtcacggggagccg
agccacgcagagagtttacccaaggagcgagcgacggagggcatcgcaatggagattgac
tacgcttcctgcaagaggctggggtccagctacagagcactgcccaagagctaccagcag
cccaagtgcacaggacggacgccgctgtgcagagaggttctgaatgacacgtgggtgtcg
tttccttcgtggtctgaggattccacgtttgtgagctccaagaagactcaatatgaggag
cacatttacagatgtgaggatgagcgctttgagctggatgttgtgttggagaccaacctc
tccacaatacgagccctggagtcggtgcagcggaagctttcgcgcatgtcggctgaggag
cagctgcgcttcaagctggacaacacaatgggcggctcctcagaggtcattcaccgcaaa
gctatccagaggatatatggggacaaggccaatgacatcattgacgggcttaagaagaac
ccagctgcgtctgtccccatagtgctgaaaaggttaaaaattaaggaggaggagtggaga
gaagcccagagaggattcaacaaaatctggcaggagcagaatgaaaagtattacctgaag
tcactggaccatcaaggaatcaacttcaagcagaatgacaccaaagtgctgcgttcaaag
accttgctcaatgaaattgagttgctatatgatgatcgtcaggagcgagcggccgaggaa
gcccccgcacctccagtgagcggcccgcacatgaccctgacctatgacgacagccagatc
ctggaagatgccgctgccctcatcatccaccatgtcaaacgacaggtgggcatccagaaa
gaagacaagtacaagatcaaacagatcatccaccacttcatccctgacctgctgttcgca
cagcgaggtgagctctcggatgtggaggacgaggacgaagaggaggaagaagacctagag
atggatcaagacagccccaagaagcacaacggcttgccgggcagcagcccatcaaagtcg
aagctcctcttcagcaacccggcagctcagaagctgcgcggcacagacgaggcctacaac
ctgttcttcgtgaacaactactggtatatcttccttcgtctacaccacatcctctgttct
cgcttgctgcgaatctacgggcaagccgagaagcagatcgaagaggacggccgcgagcga
gagtgggagagagaagagttgggggtcaaaagggagaaaagtgaaaacccagcaatccaa
ctgaaaatgaaggagccaatggacgtcgatgtagacgactactactcagtgtttctggaa
atggtgcgcaaccttctggatgggaacatggagccggctcagtacgaggactccctgagg
gaaatgtttactatccatgcctacgttgccttcaccatggataagctcatacaaagcatt
gtccggcagctccagcacctcgtcactgatgacgtgtgcgcacgtgtgacagacatgtac
ctgagtgaatgtgccaataaagcgacgggcggcacgttgtccacgcagacgtccaggtcc
acagcagagggcgtctaccagcgcaaggccgagcagctaatgtccgatgagaacagcttc
aagctgatgtttgtaaagagtcgaggatctctcagcatgaccatggagctgctggacaca
gaagacgacaactccgatgagccagcagagtcggagaggtggtcagactacgtgagtaga
tacctgaactcagactctgcgtctccagagctgcgtgaacatctggcccagaagccggtg
ttcctccccaggaatttgaggcagataaggaagtgccagagaggatggaagcagctgcag
cagcaggagaggaagaccaaggccccagcggacacgtcgcaggacggtcaccgtgcgctg
aggatgcagtgcatgttcaagctcaactcctacaagatggtgtatgtctgcaagtcagag
gattgtatgtacaggcacacggctctcacacgggcccaccagtctcatcagagagtgaac
cagcgcctgcacagacgcttccaggccaaagtggacacctgggccaaagagcacgtgacc
agcgacatggccagcagcagccagaagtggctgatgggagaagaacaggaggacctgatg
tcctgcaccaccacccgctgcccggaggtcctccactatctcaacgttaacaagtaccgg
gtgaagtacagaacacttcagagagagagaaaaaagcacggcagcgatgtggtcacacaa
caaactgcccgggatgagttctga
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