Pleuronectes platessa (European plaice): 128438740
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Entry
128438740 CDS
T09923
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04142
Lysosome
pplt04144
Endocytosis
pplt05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128438740 (cltcl1)
04142 Lysosome
128438740 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128438740 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128438740 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pplt04147
]
128438740 (cltcl1)
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128438740 (cltcl1)
Exosome [BR:
pplt04147
]
Exosomal proteins
Proteins found in most exosomes
128438740 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
128438740
NCBI-ProteinID:
XP_053277385
LinkDB
All DBs
Position
4:24290029..24313806
Genome browser
AA seq
1693 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDLTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISINTVA
LVTDTAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKLSTLFCFAVRSPGGGKLHIIEVGQPATGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRIST
ETIFVTAPYETTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EELFGRKFNTLFAQGTYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANIPSKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRPHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTLALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHDGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGRYCEKRDPHLACVAYERGQCDLDLIKVCNENSLFKSEARYLVRRKDPELWATVL
EEDNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINKLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAEKCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLADIEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEFDNAVLTMMS
HPTDAWKEVLFKDIVAKVANVELYYKSLSFYLEFKPLLLNDLLIILSPRLDHSRAVNFFS
KMNQLKLVKPYLRSVQSQNNRSVNEALNNQLTEEEDYQGLRASIDAYDDFDTISLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLEVAWRNNIMDFAMPYFIQVMREYLTKVDKLEETESQR
QTEEEVTEPQPIVFGQQLMLTGAAAPVAPQPAYSGYGYPANAAGFPPQAAAAATAAAAAA
AGYPAQPAYGFNM
NT seq
5082 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgccgatacgcttccaggagcatctgcagttgcagaacctgggcgtg
aacccggcgaacatcggcttcagctatctgaccatggagtcggacaagttcatctgcatc
cgagagaaggtgggcgagcagaaccaggtggtgatcgtggacatgtccgacctcaccaac
ccaatcaggagacccatttctgccgacagtgccatcatgaacccggccagcaaggtcatc
gccctgaaagctgccaagacactgcagatcttcaacatcgagatgaagagcaaggtgaag
gctcacacgatgacggaggaggtcatgttctggaagtggatatcaataaacacggttgcg
ttggtgacggatacggccgtctatcactggagcatggagggggattcccaaccaaccaaa
gtgttcgatcggcacgccagtctggcaggatgtcagatcatcaactacagaactgacgag
caacagaagtggctactgctgatagggatctctgcacagcaaaaccgtgtagttggagcg
atgcagctgtattctgttgacaggaaggtgtctcagcccatcgaaggccacgctgctgcc
ttcggggagttcaaagtggagggaaataccaaactctccacccttttctgttttgctgtg
cgctcccctggtgggggaaagttgcacatcattgaagttggtcaaccagctacaggaaac
cagccctttgctaagaaggcagtggacgtgttcttccctccagaagctcagacagacttt
ccagtagcgatgcagattggcagtaagcatggtgtaatatatttgatcactaagtacggt
tacatccacctgtatgacctggagtctggagtgtgtatctacatgaaccgaattagtaca
gagaccatctttgtcactgctccttatgaaaccacctcaggaataatcggggtcaacaag
aagggacaggtcttgtcggtctgcgtcgaggaggaaaacattgtcaactatgccacgaac
gtccttcagaacccggatcttgccctgaggatggctgtgaggtcaaacctcgctggggct
gaggagctgtttggccggaagttcaacactttgtttgcccagggaacttattcagaggct
gcaaaggttgctgcatcagcaccaaagggaatcttgaggacggcagagaccatccgtaag
tttcagagtgtcccggcccagccaggtcaggcctctccactgttgcagtactttggtatt
cttctggaccagggccagctgaacaagtttgagtctcttgaactgtgcaggcctgtcctg
cagcagggccgcaagcaactgctggagaaatggttgaaggaggacaagctggagtgctca
gaagagctgggagacctggtgaaggcctctgaccccacactcgctctcagtgtgtacctc
agagctaacatccccagcaaggtcatccagtgctttgcagagactggccagttccagaag
attgtgctgtatgccaaaaaggtgggctacaccccagactgggtgtttttactgagaaat
gtgatgcgtgtcaatccagaccagggacttcagtttgcccagatgctggtccaggatgag
gagccgctggccaacatcaaccagattgtcgatgttttcatggagggcaacctgatccag
cagtgcacctccttcctattggatgcgttaaagaacaaccgcccggctgaaggacaccta
cagacacgtctgcttgaaatgaacctcatacacgccccccaggtggcagatgcgatcctg
gggaaccagatgttcacccactacgaccgtccccatgtcgctcagttgtgtgagaaggca
ggtctgctgcagagggcccttgaacactacaccgacctgtatgatatcaaacgagctgtg
gtgcacacgcatctgctcaaccctgagtggctggtgaacttctttggctctttgtcagtg
gaagactcgttggagtgtttgagggccatgctgtcggctaacatcaggcagaacctgcag
ttgtgtgtccaggtagcatctaagtatcacgagcagctgggaactctggcattagtggag
ctctttgaatccttcaagagttatgaaggtttgttttacttccttgggtcgattgtgaat
ttcagccaggagccagacgtccactttaagtacatccaggccgcctgtaaaacaggtcaa
atcaaagaagtggagagaatatgtagagagagcaactgctatgacccagagagggttaaa
aacttcctcaaggaggccaaactaacagaccagcttccgcttatcattgtgtgtgatcgc
tttgacttcgtccatgatctcgtgctttacctctaccgcaacaatctacagaaatacatc
gaaatctatgtacagaaggtgaaccccagtcgtttaccagtggtgatcggtgggctgctg
gatgtcgactgtgctgaggatgtcattaagaacctgatcatggtggtcagagggcagttc
tccactgatgagctggtagaggaggtggagaagagaaacaggttaaagcttctgttgccc
tggctggagtcccgtatccacgatggctgcgaggagccggccactcacaacgccctcgct
aagatctacatcgacagcaacaacacacctgaacgcttcctgaaggagaatccgttctac
gacagcgctgtcgtgggtagatactgtgagaagagagacccccacctggcctgtgtggct
tatgagagaggacagtgtgacctggacctcatcaaagtttgcaatgagaactcgttattc
aagagtgaggctcgatatctggtccgacggaaagatcccgagctgtgggcgaccgtgttg
gaggaagacaaccccttcagaagacaactcattgatcaggtggtgcagacagcgctgtca
gagacgcaggacccagaggaagtgtccgtcaccgtcaaggctttcatgacggccgaccta
cccaacgagctgatagagctgctggagaagattgttcttgataactctgtcttcagcgag
cacagaaacctccagaacctgttgattttgacagccatcaaggccgaccgcactcgggtg
atggagtacatcaacaagctggacaactatgacgctccggacatcgccaatatcgccatc
agcaacgagctctttgaggaagcatttgccattttcaagaagtttgacgtcaacacctca
gccattcaggtcctgatagagcacatagggaacttggatcgtgcctatgagtttgctgag
aagtgtaacgagcctgcggtgtggagccagttagccagagctcagctgcagagagacctg
gtcaaggaggctattgactcgtatattaaagccgtggacccgtcagcgtacatggaggtg
gtcaacgcagccagcaagaacaataactgggaggacctggtcaaattccttcagatggct
cgaaagaaagcgagagagtcgtacgtggagacggagctgatcttcgctttagccaagacc
aaccgtctggccgacattgaggagtttgtcagtgggcccaacaatgctcacatacagcag
gtgggcgatagatgttacgaggagggcatgtacgatgcagccaagctcttgtacaacaac
gtgtccaactttgctcgacttgcatcgacactcgttcacctcggggagtatcaggcggct
gtggacagcgcgaggaaagccaacagcacacggacatggaaggaggtttgctttgcctgt
gttgacggcgaggagtttcggctggcacagatctgcggcctccacatagtgatccacgct
gacgagctggaggatctgatcagctactatcaggaccgtggctacttcgaggagctcatc
gctctgctggaggccgcgctgggactggagcgggctcacatgggaatgttcaccgagctc
gccatcctctactccaagttcaaacctcagaagatgagggagcacctggagctgttctgg
tccagagtcaacatcccaaaggtccttcgggcagcggagcagtctcacttatgggcagag
ctggtgttcctgtacgacaagtacgaggagttcgacaacgcggtcctcacgatgatgtct
catcctacagatgcgtggaaagaagtgctgttcaaagacatcgttgctaaggttgccaac
gtggagttgtactataaatctctgtccttctacctggaattcaaacctcttctcctgaac
gacctgctgatcattctgtctccacggttggaccacagccgagcggtcaacttcttcagc
aagatgaaccagctgaagttggtgaagccttacctgagatctgtccagagtcagaacaac
aggtctgtcaacgaagctctcaacaaccagctgacagaggaggaagactatcagggtctg
agagcatcaatcgacgcctacgatgactttgacaccatcagcctggctcagaggttagag
aaacacgagctgattgagttcagacgtatcgctgcctacctgtacaagggcaacaaccgc
tggagacagagtgtggagctctgcaagaaggacaaactctacaaggatgcaatgctgtac
gctgcagagtcgaaggacgctgagctggcggagacgctgctgcagtggttcctggaggag
ggcaggaaggagtgcttcgccgcctgcctcttcgcctcctacgacctgcttcaccccgac
gtggtgctggaggtcgcctggaggaacaacatcatggacttcgccatgccgtacttcatc
caggtcatgagagagtacctcaccaaggtggacaagctggaggagacagaaagccaaagg
caaacggaggaggaggtgacggagcctcagccgatagtgttcggccagcagctgatgttg
actggtgctgctgctccagtggcgccgcagccagcgtactcaggctatggctaccctgcc
aacgcagcgggcttccctcctcaggccgccgccgccgcaaccgctgctgctgctgccgcc
gccggctatcctgcacagcctgcttatggcttcaacatgtag
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