Pleuronectes platessa (European plaice): 128438952
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Entry
128438952 CDS
T09923
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt03022
Basal transcription factors
pplt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128438952 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
128438952 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pplt03021
]
128438952 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
pplt03400
]
128438952 (gtf2h2)
Transcription machinery [BR:
pplt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128438952 (gtf2h2)
DNA repair and recombination proteins [BR:
pplt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128438952 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
128438952
NCBI-ProteinID:
XP_053277705
LinkDB
All DBs
Position
4:4874605..4881576
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LYVVIDCSRSMDDHDLRPNRLTATLKLMEAFVDEYFDQNPISQVGIITTKNKRAEKLTDL
TGNPKKHISALKKAVDTVCVGEPSLYNSLNLAIQSLKHMPGHTSREILIILSSLTTCDPA
NIYELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGLYHVILDESHFKELLTMHIKPPP
ASSSSECSLIRMGFPQHTIAALTDQDAKPSFSMSHLDGSNGPGLSLGGYYCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQTFAESPVEELKGERFCKACQGRLKDKSVFNC
PSCHSVFCLECDIFIHDSLHCCPCCAHCNSVP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagcgaagcgctgggaaggaggctacgagaggacatgggag
gttctgaaggaggatgaatctggctcccttaaagccacagtagaagagatactgttccag
tccaaaaggaaaagggtgattgaaagccatggacaagtgaggcttggaatgatgcgtcac
ctctatgtggtgattgactgttcaagaagtatggacgaccatgacttgagacctaaccgc
ctcaccgcgaccttaaagctgatggaagcttttgtggatgagtatttcgaccaaaacccc
atcagtcaggtgggcattatcaccacaaagaataaaagggctgagaagttgactgacctg
acaggaaacccgaagaaacacatttctgctctgaagaaagctgtggacactgtgtgtgtc
ggagaaccctccctgtacaactctctcaacctggccatacagtcccttaagcacatgcct
ggacacaccagccgggagatccttataatccttagcagccttaccacatgtgacccagcc
aacatctatgaactcatcaagaccctgaagtctctgaaggtgcgggtgtcggtaattggc
ctgtcggcagaggtccgtgtgtgcacggtgttgaccagggagacgggtggcttataccac
gttatcctggacgagagtcacttcaaagagcttctgactatgcacatcaaaccgccgcca
gccagctcctcatctgaatgctctttaatacgcatgggttttcctcagcacactatcgct
gctctgactgatcaggatgccaagccttcattcagcatgtctcatctggatggcagcaat
ggtcccggtctctctctgggagggtactactgtccacagtgccacgcaaagtacacagag
cttcctgtggagtgtaaagtctgtggtttgactctggtgtcagccccacatctcgccaga
tccttccaccacctcttccctctccagacctttgcagagagtcctgtggaggagctcaaa
ggagaaaggttctgtaaagcttgtcaaggccggttaaaggataaaagtgtattcaactgt
ccatcctgtcacagtgtgttctgtctggagtgtgatatcttcatccatgactcactccac
tgctgcccctgctgtgctcactgtaacagcgtcccctaa
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