Pleuronectes platessa (European plaice): 128439597
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Entry
128439597 CDS
T09923
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128439597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pplt04131
]
128439597
Membrane trafficking [BR:
pplt04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128439597
Protein recycling
Other Rab GTPase associated proteins
128439597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
128439597
NCBI-ProteinID:
XP_053277914
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All DBs
Position
5:complement(10583645..10589811)
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AA seq
506 aa
AA seq
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MTSQRRRIHLDQSDLLCKKGCGFYGNNAWQGLCSTCWREENQQEKQKQIKEDWALAEKLQ
REEEKAYASKQPKAESQPAITPFSKFEERKTKEKSSKVNTVTKFFIPSTKTSAKKDAAPF
ESQSSPSPSTSSSRRSSLDSDLSMRELIDFLKPMKSGREIFKQCRAFTESMVYKRNMGAD
ELSECVQDFYQNLSDRLQTQFKGSSDQVQSVMDEVEKYVMTRLYKEVFCPETTDDEKKDL
AIQKRIRDLHWVTIEMLCSPVDEEIPVVSDNVVKAITDLIEIDSKRVPNDKLRCMTSCSK
HIFNAIKASTNEAASADDFLPTLIYIVLKANPPRLQSNIQYINRFCNPRKLMSGEDGYYY
TNLCCAVAFIEKLDGQSLNLSSEQFDLYMSGQASPHWPNTNGASSTSPSPGSAALSQVHK
RLDLLTGLGERQERVMEKARQLKSDLIDWTDDVEQKVQCALENFPPETETLSAAPASGSA
AQSAIDSDNIENELLPPPLQPQVVDV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccagcggcgcaggatccacctggaccaatcagacctgctctgcaagaaggga
tgtggtttttacggcaacaacgcttggcagggcctgtgctcaacatgctggcgagaggaa
aaccagcaagaaaagcaaaagcagataaaagaagactgggcacttgctgagaagcttcag
agagaggaagagaaggcatatgcgagcaaacaaccaaaggcagagtcacagcctgccatc
acacccttcagcaagtttgaagaaagaaaaacaaaggaaaagtccagcaaagttaacaca
gtcacaaagttttttattccttccaccaaaacatcagcaaaaaaggatgctgctcctttt
gaatcccagtccagccccagtccaagcacctcctcaagccgacgctcctctctggacagt
gacctctcaatgcgagagctcattgattttctcaagcccatgaagtctggcagggagatc
ttcaaacagtgccgggccttcactgagagcatggtctataagcggaacatgggtgctgat
gagctgtcagagtgtgtacaagacttctaccagaacctctctgatcgcctccagactcag
ttcaaaggctcatcagaccaggtacagagtgttatggatgaagtagagaagtacgtgatg
actcgtctctacaaggaagtgttctgtcctgaaaccacagatgatgagaaaaaagatctg
gccattcagaagagaatcagagacttgcactgggtcaccattgagatgctgtgctctccg
gtggatgaggagatccctgtggtttctgacaatgtagtcaaagccatcacagatttgatc
gaaattgactcgaagcgcgtgcccaacgacaaactgcgctgcatgaccagctgcagcaag
cacatcttcaacgccatcaaagccagtacgaacgaggctgcgtctgcggacgacttcctc
ccgaccctcatctacatcgtgctaaaagcaaaccctccacgactgcagtccaacatccag
tacatcaaccgcttctgcaaccccaggaagctcatgtccggagaggatggttactactac
actaatctgtgctgtgcggtggccttcattgagaagctggacggtcagtctctgaacctg
agctctgagcagtttgatctctacatgtcgggccaggcgtccccccactggccaaatacc
aacggagcttcctccacctcgccctcaccaggcagcgcagctctcagtcaggtccataaa
cgactagacctgctaacagggctcggggaaaggcaggagcgcgtcatggagaaggctcgc
caactgaagagcgacctgatcgactggacagatgatgtggagcagaaggtccagtgcgct
ctggagaacttcccaccagagacagaaacgctctccgcagccccagcgagcggctctgca
gcacagtcagcaatcgactctgataacattgagaacgagctcctgcctccgccactgcag
ccgcaggtggttgacgtgtag
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