Pleuronectes platessa (European plaice): 128439868
Help
Entry
128439868 CDS
T09923
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pplt
Pleuronectes platessa (European plaice)
Pathway
pplt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pplt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128439868 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pplt04121
]
128439868 (trip12)
Enzymes [BR:
pplt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128439868 (trip12)
Ubiquitin system [BR:
pplt04121
]
Ubiquitin ligases (E3)
HECT type E3
128439868 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
128439868
NCBI-ProteinID:
XP_053278320
LinkDB
All DBs
Position
5:14121827..14145558
Genome browser
AA seq
2069 aa
AA seq
DB search
MSNRPNSNPGGSLRRSKRNTAAAQPQDHTVAGRLQSEQVKNKANSPPESRRLNSKASKAT
ASTATGQSRGQNSRRSGLTLSVASFVLQDDPEAAGTSEQDRPGHQSKSEGTRGLKRSEAP
DQIITFGPTPAKKSKSLPPPRDNTSETKKGPAKSKKRSIASEPPASSGRGQSKKSGPTGA
SPIPKRKKVDSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKSASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDLMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGGHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIFFADAELLKDVLRNHAVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVFFRREGVMHQVKNLAESETFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQDNPPTLPGFFTAKSPTSTQSPKSSFLASLNPKTWGKLGTQTN
NANSEPSRTAGVSGLARAPPKDSISNNRDKIKAWIKEQAIKFVERYFNSENVDGSNPALN
VLQRLCTATEQLNLQVDGGMECLSEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRD
LLTRDVRLKRFLHVFAGCPVPGMDPVGRLDPTGNGAYLGLVHKMNSCLSQMEQFPVKVHD
FPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAV
RQYSLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAP
TKTSPRNAKKQDELWHDGVCPSVINPLETYLTPEPPETITFDDPSLEVNLLLRVLHSISR
HWFYLFDNAVCKEIILTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGS
QEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFY
KWMLRNELSVSSHDLVNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQGLESLNMN
GCSVEDLGLDLTLPGYPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFRE
GFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFDVL
SSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcaaagaggaacact
gctgcggcccagccacaagaccacacagttgcgggaaggttgcagtcagagcaagtaaaa
aataaagcaaattccccacctgaaagtagaagacttaattctaaggcttccaaagccaca
gccagcacagccactggccagtccagagggcagaactcaagaagaagcggtcttactctg
tccgtggcttcatttgtgttgcaagacgacccagaggctgcagggacctctgaacaagac
agaccaggccaccagtcaaagagtgaaggcacccgaggtctaaagagaagtgaagctcct
gaccaaattattacatttggaccgacccctgccaagaaatccaaatcgctcccaccaccc
agagacaatacctcagagaccaagaaaggcccagcaaagtctaagaaaagatcaatcgcc
tcagaaccacctgcatcgtcaggtcgaggtcagagcaagaagagcgggcccactggggcc
tcaccaatcccgaaacggaagaaagtggactctctccccggtctaagtagcaccgctggg
tccctccccaatcgtacggagggcagaactgcaaaacccaccaagctggcgtctaaatca
gccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctctgcttccact
tcttcctcttcatcaaccacaggcaccaacagcgccaccactcagggcgccagagtcaaa
cagggaaaagatcagaccaaggcacgtcgctctcgctcggcctcaagcccctccccacgc
cgcagtacccgtgacaaggagcaggccaaatctgccagctcttctaaatttgagtgggca
gcacgcttcaaccccaaagtaaacctgccaaaacccaaactgtccttgcccggatcttcc
aaaactgagacatccaaacctgggccatcaggattacaagctaaactagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctaggc
aagcgcggagcagccgacgctcgccggcaggagaaaatggccgactctgacaacaaccaa
gatggggccaactcctcagccgctcgcactgatgaggcatcacaaggggcttcagcttca
agctcagttgctggagcagtgggcatgacgacctctggagagagtgagtctgatgattca
gaaatgggaagacttcaagccctactggaagccaggggactccccccacatctttttggg
cccttgggaccccgcatgtcacagctgtttcacaggaccataggcagtggagccagctcc
aaggctcagcagttactgcagggcctgcaggccacaggtgatgagtctcagcagctccaa
gccgctattgagatgtgccagctgctggtgatgggtaatgaagagacacttggtggattc
cctgttaagagtgtggtgcccgccttgattacactgttacaaatggagcataactttgat
attatgaatcatgcctctcgtgcactcacatatatgatggaggcattgcctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccaattcatt
gacgtagcagagcaggcactgactgccttggaaatgttgtcaaggcgacacagcaaagcc
attttgcaggctggtgggctcgctgactgcctgctttacttagagttctttagcatcaat
gctcagaggaatgccctggccattgcagccaactgctgccagagcattactccagacgag
ttccactttgtagctgattctctgccactgttgacacagagactcacacaccaggataag
aaatccgtcgaaagcacttgtctctgtttcgcaagactggtggacaactttcaacatgaa
gagaacctgctgcaggaggtggcgtcacgggacctgttgaccaacattcagcagcttctg
gttgtgacccctcctgtgctcagctcggggatgttcatcatggttgtgcgcatgttctct
ctaatgtgctctaactgcccctgccttgcagtccagcttatgaagcagaacatagcagag
actctacgtttcctcttgtgtggtgcgtcaaatggcagctgccaggaacagattgagctg
gtacctcggagcccacaggagctctacgaactgacctcactcatatgtgagctgatgccc
tgcctgccgagagaaggcatctttgccgttgacttaatgctgaagaagggtagtgcccag
actaccgaaggcgcgatctggcagtggagggatgaccgaggactgtggcacccttacaac
cgcattgatagccgaatcattgagacagcgcaccagaacggggaggatgagattagtttg
tcaactcttggccgtgtgtacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcacgtggaatacagaggaaaccaaatcctctcgccaaccccaacacaggg
ggccaccaggaggttcgtcgagaagacgcacgagcccagttgatgaaggaggaccctgaa
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcgtcg
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatcttctttgct
gatgcagagctgttgaaggatgtgctgaggaaccatgctgtgtccagtcacattgcctcc
atgctgtccagccaggatctgaagattgtagtgggttctctgcagatggctgagatcctc
atgcagaagctacctgatgtcttcagtgtctttttcagaagggaaggtgtaatgcaccag
gttaagaacctggcagagtctgagacctttttagtaacaagtccccctaaggcttgccca
agtggtaccgccagtctgtgtaccaccaccatcagcacggcatctaccacatctgctaat
aatgcaactccagacctaggctcgcccagcttccagcacagcatggacgactcactggac
ctcagcccacaggggcggttaagtgatgtcctaaagaggaaacgactccctaaaagaggg
ccgaggagacccaaatactctcctccaagagatgatgacaaagtagacaatcaggataac
cctcccactctgcctgggttctttacagctaagagcccaaccagtactcagtcacccaaa
tcatccttcttggctagtctgaatcccaagacctggggcaaacttggcacccagaccaat
aatgccaactctgagccctcacgcacagcgggggtgagtggcttggcaagggcccctcca
aaggactcaatatcaaataacagagacaaaataaaggcctggatcaaagaacaggcgatt
aagtttgttgagcgctacttcaactctgaaaatgtggatggcagcaacccagcactgaat
gtactccagagactttgcacagccactgagcagctcaacctgcaggtggacggtggtatg
gagtgcctgtcggagatctccagtattgtatcggaatctgatgtgtcatcatttgagatc
cagcacagtgggctggtgaagcagctcttggtctaccttacctccaacacagacagggac
ttgctgactcgtgacgtgcggctcaagaggttcctccatgtgttcgctggctgtccggtt
ccaggaatggaccctgtcggtcgtctagacccaacagggaacggggcttacctgggcctg
gtgcacaagatgaacagctgtctgagccaaatggagcagttccctgttaaagtgcatgac
ttccccagtggcaacggcaatggcagcaggggatctcaggcactgaagttcttcaataca
catcagctgaagtgtcagctgcagagacacccagactgcactaatgttaaacagtggaaa
ggaggcccagtgaagatagacccactggctctggtgcaagccatcgagagatatttagtt
gtcagagggtatggccgaatcagagaagaagacgaagacagtgatgatgatggttcagat
gatgaaatcgatgaatcactggcagcacagttcctgaattctggcagtgtgcgtcacaga
ctacagttctacatcggtgaccacctgttaccatataacatgactgtataccaagctgta
cggcagtacagtcttcaggcagaagaagaaagggagtcgacggatgatgaagccaacccc
cttgggcgagctggcatctggaccaaaacgcacacaatatggtataagcctgtgagagag
gatgaggatggcagcaaagatgctgtgggtggaaagaggggtcgagcccagactgctccc
accaaaacctcacctcgcaacgccaagaagcaggatgagctgtggcatgatggtgtgtgt
cccagcgtcatcaatcccttagagacatacctcactccggagccaccagagaccataacc
tttgatgacccctctttagaggtcaacctgctgctgagggtcctgcactccatcagtaga
cactggttctacttgtttgataatgctgtgtgtaaggaaatcatcctgaccactgagttc
attaacagtaagctgacagccaaagccaaccgtcagctacaagacccactggtcatcatg
acagggaatatccctacatggctcatcgagcttggaaagacctgtcctttcttcttcccc
tttgacacccggcagatgttgttctatgttactgcctttgaccgcgatagagcaatgcag
cgcctactggatacaaaccctgagatcaaccaatcagattctcaggacagcagagttgca
ccacgtctggacaggaaaaagaggacgataaaccgtgacgagctgctcaaacaggctgag
tctgtaatgcaggacctcggcagctccagggcaatgctggagattcagtatgagaacgag
gttggcacaggtcttggcccaactctggagttctacgctctggtgtctcaagagctgcag
cgggctgacctcggcctgtggaggggcgaagaggtcactctggccaatcctaaaggaagc
caagagggaactaagtatatgttcagctccagaggactgtttgcggttccctttggcagg
acaacaaaaccagcacacatagccaaaatcaaaatgaagttccgtttcttaggaaagcta
atggccaaagccattatggacttcagactgctggacctgcccctgggtctgccgttttac
aagtggatgctgcgaaatgagttgtcggtaagctcccatgatctggtgaacattgacccc
agtgtggccaagtccattcagcacctggaagatatcatccgccagaagaagaggctggag
caggaccgatcacagacgagggagaccttgcagcaggggctagaaagcctgaacatgaac
ggctgctcagtagaggacctgggtttggacctcaccctcccaggatacccaaacattgag
ctgaaaaagggcggcaaagacgtcccagtcacaatctacaacctggaggaatacctcagg
ttggtggtgtactggactctaaatgaaggagtgtccagacaatttgagtcgtttagggaa
gggtttgagtcagtcttccctttacatcacctgcagtatttctatccagaggagcttgac
cagttgctgtgtggcagtaaatcagagacgtgggacgtcaagacactgatggagtgctgt
cgaccagaccatggctacacacatgacagccgtgcagttcggtttctgtttgacgtgctg
agcagcttcgatgccgagcagcagagactcttcctgcagttcgttacaggaagccccaga
ctgcctgtcggaggtttccggagcctgaatccccctctgacgatcgtgaggaagaccttc
gagtcgacagagaacccagacgacttcctcccctcagtcatgacctgcgtcaactacctg
aagctgcctgactactccagcatagagatcatgcgagagaaactgttgattgcggcacgc
gagggccagcagtctttccacctttcctga
DBGET
integrated database retrieval system
